Literature DB >> 29118169

The Complexities of Nocardia Taxonomy and Identification.

Patricia S Conville1, Barbara A Brown-Elliott2, Terry Smith2, Adrian M Zelazny3.   

Abstract

Nocardia species are a complex group of organisms considered to belong to the aerobic actinomycetes. Of the validly described species, many have been implicated as the cause of serious human infections, especially in immunocompromised patients. The genus has a complicated taxonomic history; this is especially true for Nocardia asteroides, the type species of the genus and previously the most frequently reported nocardial taxon from human specimens. We provide background on the current taxonomy of Nocardia, with a focus on clinically relevant species, and discuss the currently available methods used to accurately identify isolates to the species, complex, or group level.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  Nocardia; aerobic actinomycetes; taxonomy

Mesh:

Year:  2017        PMID: 29118169      PMCID: PMC5744224          DOI: 10.1128/JCM.01419-17

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  22 in total

1.  Identification of Nocardia Species by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry.

Authors:  Prasanna D Khot; Brian A Bird; Robert J Durrant; Mark A Fisher
Journal:  J Clin Microbiol       Date:  2015-08-12       Impact factor: 5.948

2.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

Authors:  Koichiro Tamura; Glen Stecher; Daniel Peterson; Alan Filipski; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2013-10-16       Impact factor: 16.240

3.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

4.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

5.  secA1 gene sequence polymorphisms for species identification of Nocardia species and recognition of intraspecies genetic diversity.

Authors:  Fanrong Kong; Huiping Wang; Erqing Zhang; Vitali Sintchenko; Meng Xiao; Tania C Sorrell; Xiaoyou Chen; Sharon C-A Chen
Journal:  J Clin Microbiol       Date:  2010-09-01       Impact factor: 5.948

6.  Phylogeny and identification of Nocardia species on the basis of multilocus sequence analysis.

Authors:  L R McTaggart; S E Richardson; M Witkowska; S X Zhang
Journal:  J Clin Microbiol       Date:  2010-09-15       Impact factor: 5.948

7.  Identification of mycobacterium spp. and nocardia spp. from solid and liquid cultures by matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS).

Authors:  Victoria Girard; Sandrine Mailler; Martin Welker; Maud Arsac; Béatrice Cellière; Pierre-Jean Cotte-Pattat; Sonia Chatellier; Géraldine Durand; Anne-Marie Béni; Jacques Schrenzel; Elizabeth Miller; Rahima Dussoulier; W Michael Dunne; Susan Butler-Wu; Michael A Saubolle; Den Sussland; Melissa Bell; Alex van Belkum; Parampal Deol
Journal:  Diagn Microbiol Infect Dis       Date:  2016-08-02       Impact factor: 2.803

8.  Nocardia cyriacigeorgica, an emerging pathogen in the United States.

Authors:  Robert Schlaberg; Richard C Huard; Phyllis Della-Latta
Journal:  J Clin Microbiol       Date:  2007-11-14       Impact factor: 5.948

9.  Evaluation of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Identification of Mycobacterium species, Nocardia species, and Other Aerobic Actinomycetes.

Authors:  S P Buckwalter; S L Olson; B J Connelly; B C Lucas; A A Rodning; R C Walchak; S M Deml; S L Wohlfiel; N L Wengenack
Journal:  J Clin Microbiol       Date:  2015-12-04       Impact factor: 5.948

10.  Defining reference sequences for Nocardia species by similarity and clustering analyses of 16S rRNA gene sequence data.

Authors:  Manal Helal; Fanrong Kong; Sharon C A Chen; Michael Bain; Richard Christen; Vitali Sintchenko
Journal:  PLoS One       Date:  2011-06-08       Impact factor: 3.240

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  51 in total

Review 1.  Nocardiosis: A Neglected Disease.

Authors:  Shalini Dewan Duggal; Tulsi Das Chugh
Journal:  Med Princ Pract       Date:  2020-05-18       Impact factor: 1.927

Review 2.  Performance and Application of 16S rRNA Gene Cycle Sequencing for Routine Identification of Bacteria in the Clinical Microbiology Laboratory.

Authors:  Deirdre L Church; Lorenzo Cerutti; Antoine Gürtler; Thomas Griener; Adrian Zelazny; Stefan Emler
Journal:  Clin Microbiol Rev       Date:  2020-09-09       Impact factor: 26.132

3.  Retrospective Analysis of Antimicrobial Susceptibility Profiles of Nocardia Species from a Tertiary Hospital and Reference Laboratory, 2011 to 2017.

Authors:  Ahmed M Hamdi; Madiha Fida; Sharon M Deml; Omar M Abu Saleh; Nancy L Wengenack
Journal:  Antimicrob Agents Chemother       Date:  2020-02-21       Impact factor: 5.191

4.  Multiple Brain Abscesses Caused by Nocardia Beijingensis in a Patient With HIV Infection.

Authors:  Dehydra M Leon-Tavares; Graciela Hernández-Silva; Paulette Diaz-Lomeli; Areli Martínez-Gamboa; Bruno A Lopez-Luis
Journal:  Cureus       Date:  2022-06-08

5.  Stroke like presentation of disseminated CNS Nocardia beijingensis infection in an immunocompetent patient: Case report and review of the literature.

Authors:  Alessandra Diioia; Lalit Kalra; Lynne C Krop
Journal:  IDCases       Date:  2021-07-10

6.  Assessment of VITEK® MS IVD database V3.0 for identification of Nocardia spp. using two culture media and comparing direct smear and protein extraction procedures.

Authors:  T Durand; F Vautrin; E Bergeron; V Girard; S Polsinelli; V Monnin; G Durand; O Dauwalder; O Dumitrescu; F Laurent; V Rodríguez-Nava
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2019-11-22       Impact factor: 3.267

7.  Evaluation of the Vitek MS v3.0 Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry System for Identification of Mycobacterium and Nocardia Species.

Authors:  Barbara A Body; Melodie A Beard; E Susan Slechta; Kimberly E Hanson; Adam P Barker; N Esther Babady; Tracy McMillen; Yi-Wei Tang; Barbara A Brown-Elliott; Elena Iakhiaeva; Ravikiran Vasireddy; Sruthi Vasireddy; Terry Smith; Richard J Wallace; S Turner; L Curtis; Susan Butler-Wu; Jenna Rychert
Journal:  J Clin Microbiol       Date:  2018-05-25       Impact factor: 5.948

8.  Nocardia colonization in contrast to nocardiosis: a comparison of patients' clinical characteristics.

Authors:  Ili Margalit; Khitam Muhsen; Yaara Ben Ari; Haim Ben-Zvi; Yael Shostak; Ilan Krause; Elad Goldberg
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2019-12-20       Impact factor: 3.267

Review 9.  Current Capabilities of Gut Microbiome-Based Diagnostics and the Promise of Clinical Application.

Authors:  Gregory L Damhorst; Max W Adelman; Michael H Woodworth; Colleen S Kraft
Journal:  J Infect Dis       Date:  2021-06-16       Impact factor: 5.226

10.  Post-traumatic exogenous endophthalmitis caused by Nocardia farcinica.

Authors:  Marie Česká Burdová; Kateřina Donátová; Gabriela Mahelková; Vanda Chrenková; Dagmar Dotřelová
Journal:  J Ophthalmic Inflamm Infect       Date:  2021-06-01
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