Literature DB >> 22688811

Viral quasispecies evolution.

Esteban Domingo1, Julie Sheldon, Celia Perales.   

Abstract

Evolution of RNA viruses occurs through disequilibria of collections of closely related mutant spectra or mutant clouds termed viral quasispecies. Here we review the origin of the quasispecies concept and some biological implications of quasispecies dynamics. Two main aspects are addressed: (i) mutant clouds as reservoirs of phenotypic variants for virus adaptability and (ii) the internal interactions that are established within mutant spectra that render a virus ensemble the unit of selection. The understanding of viruses as quasispecies has led to new antiviral designs, such as lethal mutagenesis, whose aim is to drive viruses toward low fitness values with limited chances of fitness recovery. The impact of quasispecies for three salient human pathogens, human immunodeficiency virus and the hepatitis B and C viruses, is reviewed, with emphasis on antiviral treatment strategies. Finally, extensions of quasispecies to nonviral systems are briefly mentioned to emphasize the broad applicability of quasispecies theory.

Entities:  

Mesh:

Year:  2012        PMID: 22688811      PMCID: PMC3372249          DOI: 10.1128/MMBR.05023-11

Source DB:  PubMed          Journal:  Microbiol Mol Biol Rev        ISSN: 1092-2172            Impact factor:   11.056


  798 in total

1.  Studies on the incorporation of 5-fluorouracil into a virus nucleic acid.

Authors:  M P GORDON; M STAEHELIN
Journal:  Biochim Biophys Acta       Date:  1959-12

2.  Suppression of viral infectivity through lethal defection.

Authors:  Ana Grande-Pérez; Ester Lázaro; Pedro Lowenstein; Esteban Domingo; Susanna C Manrubia
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-14       Impact factor: 11.205

3.  HIV-1 dual/mixed tropic isolates show different genetic and phenotypic characteristics and response to maraviroc in vitro.

Authors:  Valentina Svicher; Emanuela Balestra; Valeria Cento; Loredana Sarmati; Luca Dori; Ina Vandenbroucke; Roberta D'Arrigo; Anna Rita Buonomini; Herwig Van Marck; Matteo Surdo; Patrizia Saccomandi; Wendy Mostmans; Jeroen Aerssens; Stefano Aquaro; Lieven J Stuyver; Massimo Andreoni; Francesca Ceccherini-Silberstein; Carlo Federico Perno
Journal:  Antiviral Res       Date:  2011-02-22       Impact factor: 5.970

Review 4.  Functions and regulation of RNA editing by ADAR deaminases.

Authors:  Kazuko Nishikura
Journal:  Annu Rev Biochem       Date:  2010       Impact factor: 23.643

5.  Use of substituted and tandem-repeated peptides to probe the relevance of the highly conserved RGD tripeptide in the immune response against foot-and-mouth disease virus.

Authors:  I S Novella; B Borrego; M G Mateu; E Domingo; E Giralt; D Andreu
Journal:  FEBS Lett       Date:  1993-09-20       Impact factor: 4.124

Review 6.  Structural insights into replication initiation and elongation processes by the FMDV RNA-dependent RNA polymerase.

Authors:  Cristina Ferrer-Orta; Rubén Agudo; Esteban Domingo; Nuria Verdaguer
Journal:  Curr Opin Struct Biol       Date:  2009-11-13       Impact factor: 6.809

7.  Integration of hepatitis B virus DNA into the genome of liver cells in chronic liver disease and hepatocellular carcinoma. Studies in percutaneous liver biopsies and post-mortem tissue specimens.

Authors:  D A Shafritz; D Shouval; H I Sherman; S J Hadziyannis; M C Kew
Journal:  N Engl J Med       Date:  1981-10-29       Impact factor: 91.245

8.  Quantifying the impact of human immunodeficiency virus-1 escape from cytotoxic T-lymphocytes.

Authors:  Ulrich D Kadolsky; Becca Asquith
Journal:  PLoS Comput Biol       Date:  2010-11-04       Impact factor: 4.475

9.  Increased fidelity reduces poliovirus fitness and virulence under selective pressure in mice.

Authors:  Julie K Pfeiffer; Karla Kirkegaard
Journal:  PLoS Pathog       Date:  2005-10-07       Impact factor: 6.823

10.  Counteracting quasispecies adaptability: extinction of a ribavirin-resistant virus mutant by an alternative mutagenic treatment.

Authors:  Celia Perales; Rubén Agudo; Esteban Domingo
Journal:  PLoS One       Date:  2009-05-14       Impact factor: 3.240

View more
  363 in total

Review 1.  The tortoise or the hare? Impacts of within-host dynamics on transmission success of arthropod-borne viruses.

Authors:  Benjamin M Althouse; Kathryn A Hanley
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-08-19       Impact factor: 6.237

2.  Deep sequencing of 2009 influenza A/H1N1 virus isolated from volunteer human challenge study participants and natural infections.

Authors:  Yongli Xiao; Jae-Keun Park; Stephanie Williams; Mitchell Ramuta; Adriana Cervantes-Medina; Tyler Bristol; Sarah Smith; Lindsay Czajkowski; Alison Han; John C Kash; Matthew J Memoli; Jeffery K Taubenberger
Journal:  Virology       Date:  2019-06-13       Impact factor: 3.616

Review 3.  Rethinking quasispecies theory: From fittest type to cooperative consortia.

Authors:  Luis P Villarreal; Guenther Witzany
Journal:  World J Biol Chem       Date:  2013-11-26

Review 4.  The value of EGFRvIII as the target for glioma vaccines.

Authors:  Pedro R Lowenstein; Maria G Castro
Journal:  Am Soc Clin Oncol Educ Book       Date:  2014

5.  Foxtail mosaic virus: A Viral Vector for Protein Expression in Cereals.

Authors:  Clément Bouton; Robert C King; Hongxin Chen; Kasi Azhakanandam; Stéphane Bieri; Kim E Hammond-Kosack; Kostya Kanyuka
Journal:  Plant Physiol       Date:  2018-06-07       Impact factor: 8.340

6.  Attenuation of Foot-and-Mouth Disease Virus by Engineered Viral Polymerase Fidelity.

Authors:  Devendra K Rai; Fayna Diaz-San Segundo; Grace Campagnola; Anna Keith; Elizabeth A Schafer; Anna Kloc; Teresa de Los Santos; Olve Peersen; Elizabeth Rieder
Journal:  J Virol       Date:  2017-07-12       Impact factor: 5.103

7.  Hepatitis A virus adaptation to cellular shutoff is driven by dynamic adjustments of codon usage and results in the selection of populations with altered capsids.

Authors:  M Isabel Costafreda; Francisco J Pérez-Rodriguez; Lucía D'Andrea; Susana Guix; Enric Ribes; Albert Bosch; Rosa M Pintó
Journal:  J Virol       Date:  2014-02-19       Impact factor: 5.103

8.  Dengue Virus Evolution under a Host-Targeted Antiviral.

Authors:  Emily Plummer; Michael D Buck; Marisa Sanchez; Jason A Greenbaum; Julia Turner; Rajvir Grewal; Brennan Klose; Aruna Sampath; Kelly L Warfield; Bjoern Peters; Urban Ramstedt; Sujan Shresta
Journal:  J Virol       Date:  2015-03-11       Impact factor: 5.103

9.  Identification of amino acid substitutions with compensational effects in the attachment protein of canine distemper virus.

Authors:  Ursula Sattler; Mojtaba Khosravi; Mislay Avila; Paola Pilo; Johannes P Langedijk; Nadine Ader-Ebert; Lisa A Alves; Philippe Plattet; Francesco C Origgi
Journal:  J Virol       Date:  2014-05-07       Impact factor: 5.103

10.  Lack of mutational hot spots during decitabine-mediated HIV-1 mutagenesis.

Authors:  Jonathan M O Rawson; Sean R Landman; Cavan S Reilly; Laurent Bonnac; Steven E Patterson; Louis M Mansky
Journal:  Antimicrob Agents Chemother       Date:  2015-08-17       Impact factor: 5.191

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.