Literature DB >> 22688221

Defining datasets and creating data dictionaries for quality improvement and research in chronic disease using routinely collected data: an ontology-driven approach.

Simon de Lusignan1, Siaw-Teng Liaw, Georgios Michalakidis, Simon Jones.   

Abstract

BACKGROUND: The burden of chronic disease is increasing, and research and quality improvement will be less effective if case finding strategies are suboptimal.
OBJECTIVE: To describe an ontology-driven approach to case finding in chronic disease and how this approach can be used to create a data dictionary and make the codes used in case finding transparent.
METHOD: A five-step process: (1) identifying a reference coding system or terminology; (2) using an ontology-driven approach to identify cases; (3) developing metadata that can be used to identify the extracted data; (4) mapping the extracted data to the reference terminology; and (5) creating the data dictionary.
RESULTS: Hypertension is presented as an exemplar. A patient with hypertension can be represented by a range of codes including diagnostic, history and administrative. Metadata can link the coding system and data extraction queries to the correct data mapping and translation tool, which then maps it to the equivalent code in the reference terminology. The code extracted, the term, its domain and subdomain, and the name of the data extraction query can then be automatically grouped and published online as a readily searchable data dictionary. An exemplar online is: www.clininf.eu/qickd-data-dictionary.html
CONCLUSION: Adopting an ontology-driven approach to case finding could improve the quality of disease registers and of research based on routine data. It would offer considerable advantages over using limited datasets to define cases. This approach should be considered by those involved in research and quality improvement projects which utilise routine data.

Entities:  

Mesh:

Year:  2011        PMID: 22688221     DOI: 10.14236/jhi.v19i3.805

Source DB:  PubMed          Journal:  Inform Prim Care        ISSN: 1475-9985


  16 in total

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Journal:  Br J Gen Pract       Date:  2018-02-26       Impact factor: 5.386

2.  Measuring Quality of Healthcare Outcomes in Type 2 Diabetes from Routine Data: a Seven-nation Survey Conducted by the IMIA Primary Health Care Working Group.

Authors:  W Hinton; H Liyanage; A McGovern; S-T Liaw; C Kuziemsky; N Munro; S de Lusignan
Journal:  Yearb Med Inform       Date:  2017-09-11

3.  Informatics as tool for quality improvement: rapid implementation of guidance for the management of chronic kidney disease in England as an exemplar.

Authors:  Simon de Lusignan
Journal:  Healthc Inform Res       Date:  2013-03-31

4.  Improving Osteoporosis Management in Primary Care: An Audit of the Impact of a Community Based Fracture Liaison Nurse.

Authors:  Tom Chan; Simon de Lusignan; Alun Cooper; Mary Elliott
Journal:  PLoS One       Date:  2015-08-27       Impact factor: 3.240

5.  Electronic health records and disease registries to support integrated care in a health neighbourhood: an ontology-based methodology.

Authors:  Siaw-Teng Liaw; Jane Taggart; Hairong Yu; Alireza Rahimi
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2014-04-07

6.  An Ontology to Improve Transparency in Case Definition and Increase Case Finding of Infectious Intestinal Disease: Database Study in English General Practice.

Authors:  Simon de Lusignan; Stacy Shinneman; Ivelina Yonova; Jeremy van Vlymen; Alex J Elliot; Frederick Bolton; Gillian E Smith; Sarah O'Brien
Journal:  JMIR Med Inform       Date:  2017-09-28

7.  Capturing complexity in clinician case-mix: classification system development using GP and physician associate data.

Authors:  Mary Halter; Louise Joly; Simon de Lusignan; Robert L Grant; Heather Gage; Vari M Drennan
Journal:  BJGP Open       Date:  2018-04-10

8.  Variation in recorded child maltreatment concerns in UK primary care records: a cohort study using The Health Improvement Network (THIN) database.

Authors:  Jenny Woodman; Nick Freemantle; Janice Allister; Simon de Lusignan; Ruth Gilbert; Irene Petersen
Journal:  PLoS One       Date:  2012-11-28       Impact factor: 3.240

9.  An ontological approach to identifying cases of chronic kidney disease from routine primary care data: a cross-sectional study.

Authors:  Nicholas I Cole; Harshana Liyanage; Rebecca J Suckling; Pauline A Swift; Hugh Gallagher; Rachel Byford; John Williams; Shankar Kumar; Simon de Lusignan
Journal:  BMC Nephrol       Date:  2018-04-10       Impact factor: 2.388

10.  Prognostic value of comorbidity indices and lung diseases in early rheumatoid arthritis: a UK population-based study.

Authors:  Elena Nikiphorou; Simon de Lusignan; Christian Mallen; Jacqueline Roberts; Kaivan Khavandi; Gabriella Bedarida; Christopher D Buckley; James Galloway; Karim Raza
Journal:  Rheumatology (Oxford)       Date:  2020-06-01       Impact factor: 7.580

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