Literature DB >> 22687622

Comparative analysis of Reoviridae reverse genetics methods.

Shane D Trask1, Karl W Boehme, Terence S Dermody, John T Patton.   

Abstract

Effective methods to engineer the segmented, double-stranded RNA genomes of Reoviridae viruses have only recently been developed. Mammalian orthoreoviruses (MRV) and bluetongue virus (BTV) can be recovered from entirely recombinant reagents, significantly improving the capacity to study the replication, pathogenesis, and transmission of these viruses. Conversely, rotaviruses (RVs), which are the major etiological agent of severe gastroenteritis in infants and children, have thus far only been modified using single-segment replacement methods. Reoviridae reverse genetics techniques universally rely on site-specific initiation of transcription by T7 RNA polymerase to generate the authentic 5' end of recombinant RNA segments, but they vary in how the RNAs are introduced into cells: recombinant BTV is recovered by transfection of in vitro transcribed RNAs, whereas recombinant MRV and RV RNAs are transcribed intracellularly from transfected plasmid cDNAs. Additionally, several parameters have been identified in each system that are essential for recombinant virus recovery. Generating recombinant BTV requires the use of 5' capped RNAs and is enhanced by multiple rounds of RNA transfection, suggesting that translation of viral proteins is likely the rate-limiting step. For RV, the efficiency of recovery is almost entirely dependent on the strength of the selection mechanism used to isolate the single-segment recombinant RV from the unmodified helper virus. The reverse genetics methods for BTV and RV are presented and compared to the previously described MRV methods. Analysis and comparison of each method suggest several key lines of research that might lead to a reverse genetics system for RV, analogous to those used for MRV and BTV. Published by Elsevier Inc.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22687622      PMCID: PMC3449048          DOI: 10.1016/j.ymeth.2012.05.012

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  47 in total

1.  Rearrangement generated in double genes, NSP1 and NSP3, of viable progenies from a human rotavirus strain.

Authors:  K Kojima; K Taniguchi; M Kawagishi-Kobayashi; S Matsuno; S Urasawa
Journal:  Virus Res       Date:  2000-04       Impact factor: 3.303

2.  Structure-function analysis of rotavirus NSP2 octamer by using a novel complementation system.

Authors:  Zenobia F Taraporewala; Xiaofang Jiang; Rodrigo Vasquez-Del Carpio; Hariharan Jayaram; B V Venkataram Prasad; John T Patton
Journal:  J Virol       Date:  2006-08       Impact factor: 5.103

3.  Generation of recombinant rotavirus with an antigenic mosaic of cross-reactive neutralization epitopes on VP4.

Authors:  Satoshi Komoto; Masanori Kugita; Jun Sasaki; Koki Taniguchi
Journal:  J Virol       Date:  2008-04-23       Impact factor: 5.103

4.  Development of reverse genetics systems for bluetongue virus: recovery of infectious virus from synthetic RNA transcripts.

Authors:  Mark Boyce; Cristina C P Celma; Polly Roy
Journal:  J Virol       Date:  2008-06-18       Impact factor: 5.103

5.  Bluetongue virus VP6 acts early in the replication cycle and can form the basis of chimeric virus formation.

Authors:  Eiko Matsuo; Polly Roy
Journal:  J Virol       Date:  2009-06-24       Impact factor: 5.103

6.  Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.

Authors:  Xiaohui Lu; Sarah M McDonald; M Alejandra Tortorici; Yizhi Jane Tao; Rodrigo Vasquez-Del Carpio; Max L Nibert; John T Patton; Stephen C Harrison
Journal:  Structure       Date:  2008-11-12       Impact factor: 5.006

7.  Bluetongue virus entry into cells.

Authors:  Mario Forzan; Mark Marsh; Polly Roy
Journal:  J Virol       Date:  2007-01-31       Impact factor: 5.103

8.  Structure of reovirus sigma1 in complex with its receptor junctional adhesion molecule-A.

Authors:  Eva Kirchner; Kristen M Guglielmi; Holger M Strauss; Terence S Dermody; Thilo Stehle
Journal:  PLoS Pathog       Date:  2008-12-12       Impact factor: 6.823

9.  Independent regulation of reovirus membrane penetration and apoptosis by the mu1 phi domain.

Authors:  Pranav Danthi; Caroline M Coffey; John S L Parker; Ty W Abel; Terence S Dermody
Journal:  PLoS Pathog       Date:  2008-12-26       Impact factor: 6.823

10.  A plasmid-based reverse genetics system for animal double-stranded RNA viruses.

Authors:  Takeshi Kobayashi; Annukka A R Antar; Karl W Boehme; Pranav Danthi; Elizabeth A Eby; Kristen M Guglielmi; Geoffrey H Holm; Elizabeth M Johnson; Melissa S Maginnis; Sam Naik; Wesley B Skelton; J Denise Wetzel; Gregory J Wilson; James D Chappell; Terence S Dermody
Journal:  Cell Host Microbe       Date:  2007-04-19       Impact factor: 21.023

View more
  6 in total

1.  Generation of genetically stable recombinant rotaviruses containing novel genome rearrangements and heterologous sequences by reverse genetics.

Authors:  Aitor Navarro; Shane D Trask; John T Patton
Journal:  J Virol       Date:  2013-03-27       Impact factor: 5.103

2.  African Swine Fever Virus NP868R Capping Enzyme Promotes Reovirus Rescue during Reverse Genetics by Promoting Reovirus Protein Expression, Virion Assembly, and RNA Incorporation into Infectious Virions.

Authors:  Heather E Eaton; Takeshi Kobayashi; Terence S Dermody; Randal N Johnston; Philippe H Jais; Maya Shmulevitz
Journal:  J Virol       Date:  2017-05-12       Impact factor: 5.103

3.  An Inhibitory Motif on the 5'UTR of Several Rotavirus Genome Segments Affects Protein Expression and Reverse Genetics Strategies.

Authors:  Giuditta De Lorenzo; Marija Drikic; Guido Papa; Catherine Eichwald; Oscar R Burrone; Francesca Arnoldi
Journal:  PLoS One       Date:  2016-11-15       Impact factor: 3.240

Review 4.  Re-Examining Rotavirus Innate Immune Evasion: Potential Applications of the Reverse Genetics System.

Authors:  Avan Antia; Amanda N Pinski; Siyuan Ding
Journal:  mBio       Date:  2022-06-14       Impact factor: 7.786

5.  Requirements and comparative analysis of reverse genetics for bluetongue virus (BTV) and African horse sickness virus (AHSV).

Authors:  Piet A van Rijn; Sandra G P van de Water; Femke Feenstra; René G P van Gennip
Journal:  Virol J       Date:  2016-07-02       Impact factor: 4.099

6.  Establishment of different plasmid only-based reverse genetics systems for the recovery of African horse sickness virus.

Authors:  Andelé M Conradie; Liesel Stassen; Henk Huismans; Christiaan A Potgieter; Jacques Theron
Journal:  Virology       Date:  2016-09-19       Impact factor: 3.616

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.