Literature DB >> 22685144

Two SusD-like proteins encoded within a polysaccharide utilization locus of an uncultured ruminant Bacteroidetes phylotype bind strongly to cellulose.

A K Mackenzie1, P B Pope, H L Pedersen, R Gupta, M Morrison, W G T Willats, V G H Eijsink.   

Abstract

We demonstrate that two characteristic Sus-like proteins encoded within a polysaccharide utilization locus (PUL) bind strongly to cellulosic substrates and interact with plant primary cell walls. This shows associations between uncultured Bacteroidetes-affiliated lineages and cellulose in the rumen and thus presents new PUL-derived targets to pursue regarding plant biomass degradation.

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Year:  2012        PMID： 22685144      PMCID： PMC3406161          DOI： 10.1128/AEM.01164-12

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  15 in total

1.  Ligation-independent cloning of PCR products (LIC-PCR).

Authors:  C Aslanidis; P J de Jong
Journal:  Nucleic Acids Res       Date:  1990-10-25       Impact factor: 16.971

2.  Characterization of four outer membrane proteins involved in binding starch to the cell surface of Bacteroides thetaiotaomicron.

Authors:  J A Shipman; J E Berleman; A A Salyers
Journal:  J Bacteriol       Date:  2000-10       Impact factor: 3.490

3.  Specificity of polysaccharide use in intestinal bacteroides species determines diet-induced microbiota alterations.

Authors:  Erica D Sonnenburg; Hongjun Zheng; Payal Joglekar; Steven K Higginbottom; Susan J Firbank; David N Bolam; Justin L Sonnenburg
Journal:  Cell       Date:  2010-06-24       Impact factor: 41.582

4.  Carbohydrate-binding modules promote the enzymatic deconstruction of intact plant cell walls by targeting and proximity effects.

Authors:  Cécile Hervé; Artur Rogowski; Anthony W Blake; Susan E Marcus; Harry J Gilbert; J Paul Knox
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-09       Impact factor: 11.205

5.  Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.

Authors:  Nicole M Koropatkin; Eric C Martens; Jeffrey I Gordon; Thomas J Smith
Journal:  Structure       Date:  2008-07       Impact factor: 5.006

6.  Bacteroides cellulosilyticus sp. nov., a cellulolytic bacterium from the human gut microbial community.

Authors:  Céline Robert; Christophe Chassard; Paul A Lawson; Annick Bernalier-Donadille
Journal:  Int J Syst Evol Microbiol       Date:  2007-07       Impact factor: 2.747

7.  Seasonal changes in the ruminal microflora of the high-arctic Svalbard reindeer (Rangifer tarandus platyrhynchus).

Authors:  C G Orpin; S D Mathiesen; Y Greenwood; A S Blix
Journal:  Appl Environ Microbiol       Date:  1985-07       Impact factor: 4.792

8.  Metagenomics of the Svalbard reindeer rumen microbiome reveals abundance of polysaccharide utilization loci.

Authors:  Phillip B Pope; Alasdair K Mackenzie; Ivan Gregor; Wendy Smith; Monica A Sundset; Alice C McHardy; Mark Morrison; Vincent G H Eijsink
Journal:  PLoS One       Date:  2012-06-06       Impact factor: 3.240

9.  Understanding the biological rationale for the diversity of cellulose-directed carbohydrate-binding modules in prokaryotic enzymes.

Authors:  Anthony W Blake; Lesley McCartney; James E Flint; David N Bolam; Alisdair B Boraston; Harry J Gilbert; J Paul Knox
Journal:  J Biol Chem       Date:  2006-07-14       Impact factor: 5.157

10.  The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics.

Authors:  Brandi L Cantarel; Pedro M Coutinho; Corinne Rancurel; Thomas Bernard; Vincent Lombard; Bernard Henrissat
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  17 in total

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Authors:  Meiling Zhang; Ning Liu; Changli Qian; Qianfu Wang; Qian Wang; Yanhua Long; Yongping Huang; Zhihua Zhou; Xing Yan
Journal:  Microb Ecol       Date:  2014-03-02       Impact factor: 4.552

2.  Analysis of the bovine rumen microbiome reveals a diversity of Sus-like polysaccharide utilization loci from the bacterial phylum Bacteroidetes.

Authors:  Carly P Rosewarne; Phillip B Pope; Jane L Cheung; Mark Morrison
Journal:  J Ind Microbiol Biotechnol       Date:  2014-01-22       Impact factor: 3.346

3.  Probiotic dosing of Ruminococcus flavefaciens affects rumen microbiome structure and function in reindeer.

Authors:  Kirsti E Præsteng; Phillip B Pope; Isaac K O Cann; Roderick I Mackie; Svein D Mathiesen; Lars P Folkow; Vincent G H Eijsink; Monica A Sundset
Journal:  Microb Ecol       Date:  2013-11       Impact factor: 4.552

4.  A polysaccharide utilization locus from an uncultured bacteroidetes phylotype suggests ecological adaptation and substrate versatility.

Authors:  A K Mackenzie; A E Naas; S K Kracun; J Schückel; J U Fangel; J W Agger; W G T Willats; V G H Eijsink; P B Pope
Journal:  Appl Environ Microbiol       Date:  2014-10-17       Impact factor: 4.792

5.  Surface glycan-binding proteins are essential for cereal beta-glucan utilization by the human gut symbiont Bacteroides ovatus.

Authors:  Kazune Tamura; Matthew H Foley; Bernd R Gardill; Guillaume Dejean; Matthew Schnizlein; Constance M E Bahr; A Louise Creagh; Filip van Petegem; Nicole M Koropatkin; Harry Brumer
Journal:  Cell Mol Life Sci       Date:  2019-05-06       Impact factor: 9.261

6.  Structural Features of a Bacteroidetes-Affiliated Cellulase Linked with a Polysaccharide Utilization Locus.

Authors:  A E Naas; A K MacKenzie; B Dalhus; V G H Eijsink; P B Pope
Journal:  Sci Rep       Date:  2015-07-02       Impact factor: 4.379

7.  Structural and functional characterization of NanU, a novel high-affinity sialic acid-inducible binding protein of oral and gut-dwelling Bacteroidetes species.

Authors:  Chatchawal Phansopa; Sumita Roy; John B Rafferty; C W Ian Douglas; Jagroop Pandhal; Phillip C Wright; David J Kelly; Graham P Stafford
Journal:  Biochem J       Date:  2014-03-15       Impact factor: 3.857

8.  Thermophilic microbial cellulose decomposition and methanogenesis pathways recharacterized by metatranscriptomic and metagenomic analysis.

Authors:  Yu Xia; Yubo Wang; Herbert H P Fang; Tao Jin; Huanzi Zhong; Tong Zhang
Journal:  Sci Rep       Date:  2014-10-21       Impact factor: 4.379

9.  Anaerobic digestion of the microalga Spirulina at extreme alkaline conditions: biogas production, metagenome, and metatranscriptome.

Authors:  Vímac Nolla-Ardèvol; Marc Strous; Halina E Tegetmeyer
Journal:  Front Microbiol       Date:  2015-06-22       Impact factor: 5.640

10.  Metagenomic insights into the carbohydrate-active enzymes carried by the microorganisms adhering to solid digesta in the rumen of cows.

Authors:  Lingling Wang; Ayat Hatem; Umit V Catalyurek; Mark Morrison; Zhongtang Yu
Journal:  PLoS One       Date:  2013-11-05       Impact factor: 3.240
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