Literature DB >> 22673571

Genomic analysis of ICEVchBan8: An atypical genetic element in Vibrio cholerae.

Elisa Taviani1, Matteo Spagnoletti, Daniela Ceccarelli, Bradd J Haley, Nur A Hasan, Arlene Chen, Mauro M Colombo, Anwar Huq, Rita R Colwell.   

Abstract

Genomic islands (GIs) and integrative conjugative elements (ICEs) are major players in bacterial evolution since they encode genes involved in adaptive functions of medical or environmental importance. Here we performed the genomic analysis of ICEVchBan8, an unusual ICE found in the genome of a clinical non-toxigenic Vibrio cholerae O37 isolate. ICEVchBan8 shares most of its genetic structure with SXT/R391 ICEs. However, this ICE codes for a different integration/excision module is located at a different insertion site, and part of its genetic cargo shows homology to other pathogenicity islands of V. cholerae.
Copyright © 2012 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

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Year:  2012        PMID： 22673571      PMCID： PMC3612942          DOI： 10.1016/j.febslet.2012.03.064

Source DB:  PubMed          Journal:  FEBS Lett        ISSN： 0014-5793            Impact factor:   4.124


  29 in total

1.  ICEVchInd5 is prevalent in epidemic Vibrio cholerae O1 El Tor strains isolated in India.

Authors:  Daniela Ceccarelli; Matteo Spagnoletti; Donatella Bacciu; Yael Danin-Poleg; Deepak K Mendiratta; Yechezkel Kashi; Piero Cappuccinelli; Vincent Burrus; Mauro M Colombo
Journal:  Int J Med Microbiol       Date:  2011-01-26       Impact factor: 3.473

2.  Integrating conjugative elements of the SXT/R391 family trigger the excision and drive the mobilization of a new class of Vibrio genomic islands.

Authors:  Aurélie Daccord; Daniela Ceccarelli; Vincent Burrus
Journal:  Mol Microbiol       Date:  2010-09-28       Impact factor: 3.501

Review 3.  Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow.

Authors:  Rachel A F Wozniak; Matthew K Waldor
Journal:  Nat Rev Microbiol       Date:  2010-07-05       Impact factor: 60.633

4.  Integrating conjugative elements as vectors of antibiotic, mercury, and quaternary ammonium compound resistance in marine aquaculture environments.

Authors:  Arturo Rodríguez-Blanco; Manuel L Lemos; Carlos R Osorio
Journal:  Antimicrob Agents Chemother       Date:  2012-02-06       Impact factor: 5.191

5.  Discovery of novel Vibrio cholerae VSP-II genomic islands using comparative genomic analysis.

Authors:  Elisa Taviani; Christopher J Grim; Jinna Choi; Jongsik Chun; Bradd Haley; Nur A Hasan; Anwar Huq; Rita R Colwell
Journal:  FEMS Microbiol Lett       Date:  2010-05-06       Impact factor: 2.742

6.  CTXphi contains a hybrid genome derived from tandemly integrated elements.

Authors:  B M Davis; M K Waldor
Journal:  Proc Natl Acad Sci U S A       Date:  2000-07-18       Impact factor: 11.205

Review 7.  Genomic evolution of Vibrio cholerae.

Authors:  Yong-Joon Cho; Hana Yi; Je Hee Lee; Dong Wook Kim; Jongsik Chun
Journal:  Curr Opin Microbiol       Date:  2010-09-17       Impact factor: 7.934

8.  Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae.

Authors:  Jongsik Chun; Christopher J Grim; Nur A Hasan; Je Hee Lee; Seon Young Choi; Bradd J Haley; Elisa Taviani; Yoon-Seong Jeon; Dong Wook Kim; Jae-Hak Lee; Thomas S Brettin; David C Bruce; Jean F Challacombe; J Chris Detter; Cliff S Han; A Christine Munk; Olga Chertkov; Linda Meincke; Elizabeth Saunders; Ronald A Walters; Anwar Huq; G Balakrish Nair; Rita R Colwell
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-31       Impact factor: 11.205

9.  Excision dynamics of Vibrio pathogenicity island-2 from Vibrio cholerae: role of a recombination directionality factor VefA.

Authors:  Salvador Almagro-Moreno; Michael G Napolitano; E Fidelma Boyd
Journal:  BMC Microbiol       Date:  2010-11-30       Impact factor: 3.605

10.  Mobile antibiotic resistance encoding elements promote their own diversity.

Authors:  Geneviève Garriss; Matthew K Waldor; Vincent Burrus
Journal:  PLoS Genet       Date:  2009-12-18       Impact factor: 5.917
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  8 in total

1.  A new integrative conjugative element detected in Haitian isolates of Vibrio cholerae non-O1/non-O139.

Authors:  Daniela Ceccarelli; Matteo Spagnoletti; Nur A Hasan; Stephanie Lansing; Anwar Huq; Rita R Colwell
Journal:  Res Microbiol       Date:  2013-08-28       Impact factor: 3.992

2.  Redefinition and Unification of the SXT/R391 Family of Integrative and Conjugative Elements.

Authors:  Audrey Bioteau; Romain Durand; Vincent Burrus
Journal:  Appl Environ Microbiol       Date:  2018-06-18       Impact factor: 4.792

Review 3.  Fitness factors in vibrios: a mini-review.

Authors:  Crystal N Johnson
Journal:  Microb Ecol       Date:  2013-01-10       Impact factor: 4.552

4.  SXT/R391 integrative and conjugative elements in Proteus species reveal abundant genetic diversity and multidrug resistance.

Authors:  Xinyue Li; Yu Du; Pengcheng Du; Hang Dai; Yujie Fang; Zhenpeng Li; Na Lv; Baoli Zhu; Biao Kan; Duochun Wang
Journal:  Sci Rep       Date:  2016-11-28       Impact factor: 4.379

5.  Characterization of Three Novel SXT/R391 Integrating Conjugative Elements ICEMfuInd1a and ICEMfuInd1b, and ICEMprChn1 Identified in the Genomes of Marinomonas fungiae JCM 18476T and Marinomonas profundimaris Strain D104.

Authors:  Jhasketan Badhai; Subrata K Das
Journal:  Front Microbiol       Date:  2016-11-25       Impact factor: 5.640

6.  ICE SXT vs. ICESh95: Co-existence of Integrative and Conjugative Elements and Competition for a New Host.

Authors:  Gisela Parmeciano DI Noto; Andrés Iriarte; María Soledad Ramírez; Daniela Centrón; Cecilia Quiroga
Journal:  Sci Rep       Date:  2019-05-29       Impact factor: 4.379

7.  Draft Genome Sequences of Vibrio cholerae Non-O1, Non-O139 Isolates from Common Tern Chicks (Sterna hirundo) following a Mass Mortality Event.

Authors:  Eckhard Strauch; Claudia Jäckel; Jens Andre Hammerl; Veit Hennig; Nicole Roschanski; Insa Dammann
Journal:  Microbiol Resour Announc       Date:  2020-11-12

8.  Comparative genomic analysis of six new-found integrative conjugative elements (ICEs) in Vibrio alginolyticus.

Authors:  Peng Luo; Xiangyan He; Yanhong Wang; Qiuting Liu; Chaoqun Hu
Journal:  BMC Microbiol       Date:  2016-05-04       Impact factor: 3.605
  8 in total

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