Literature DB >> 22661712

Crystal structure of human ADP-ribose transferase ARTD15/PARP16 reveals a novel putative regulatory domain.

Tobias Karlberg1, Ann-Gerd Thorsell, Åsa Kallas, Herwig Schüler.   

Abstract

ADP-ribosylation is involved in the regulation of DNA repair, transcription, and other processes. The 18 human ADP-ribose transferases with diphtheria toxin homology include ARTD1/PARP1, a cancer drug target. Knowledge of other family members may guide therapeutics development and help evaluate potential drug side effects. Here, we present the crystal structure of human ARTD15/PARP16, a previously uncharacterized enzyme. ARTD15 features an α-helical domain that packs against its transferase domain without making direct contact with the NAD(+)-binding crevice or the donor loop. Thus, this novel domain does not resemble the regulatory domain of ARTD1. ARTD15 displays auto-mono(ADP-ribosylation) activity and is affected by canonical poly(ADP-ribose) polymerase inhibitors. These results add to a framework that will facilitate research on a medically important family of enzymes.

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Year:  2012        PMID: 22661712      PMCID: PMC3397834          DOI: 10.1074/jbc.M112.379289

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  30 in total

1.  Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.

Authors:  A Krogh; B Larsson; G von Heijne; E L Sonnhammer
Journal:  J Mol Biol       Date:  2001-01-19       Impact factor: 5.469

Review 2.  A family of killer toxins. Exploring the mechanism of ADP-ribosylating toxins.

Authors:  Kenneth P Holbourn; Clifford C Shone; K R Acharya
Journal:  FEBS J       Date:  2006-09-05       Impact factor: 5.542

3.  High throughput production of recombinant human proteins for crystallography.

Authors:  Opher Gileadi; Nicola A Burgess-Brown; Steve M Colebrook; Georgina Berridge; Pavel Savitsky; Carol E A Smee; Peter Loppnau; Catrine Johansson; Eidarus Salah; Nadia H Pantic
Journal:  Methods Mol Biol       Date:  2008

4.  Structure of the catalytic fragment of poly(AD-ribose) polymerase from chicken.

Authors:  A Ruf; J Mennissier de Murcia; G de Murcia; G E Schulz
Journal:  Proc Natl Acad Sci U S A       Date:  1996-07-23       Impact factor: 11.205

5.  Evolutionary history of the poly(ADP-ribose) polymerase gene family in eukaryotes.

Authors:  Matteo Citarelli; Sachin Teotia; Rebecca S Lamb
Journal:  BMC Evol Biol       Date:  2010-10-13       Impact factor: 3.260

6.  Crystal structure of the catalytic domain of human PARP2 in complex with PARP inhibitor ABT-888.

Authors:  Tobias Karlberg; Martin Hammarström; Patrick Schütz; Linda Svensson; Herwig Schüler
Journal:  Biochemistry       Date:  2010-02-16       Impact factor: 3.162

7.  cDNA sequence, protein structure, and chromosomal location of the human gene for poly(ADP-ribose) polymerase.

Authors:  B W Cherney; O W McBride; D F Chen; H Alkhatib; K Bhatia; P Hensley; M E Smulson
Journal:  Proc Natl Acad Sci U S A       Date:  1987-12       Impact factor: 11.205

Review 8.  Toward a unified nomenclature for mammalian ADP-ribosyltransferases.

Authors:  Michael O Hottiger; Paul O Hassa; Bernhard Lüscher; Herwig Schüler; Friedrich Koch-Nolte
Journal:  Trends Biochem Sci       Date:  2010-01-26       Impact factor: 13.807

Review 9.  Functional aspects of protein mono-ADP-ribosylation.

Authors:  Daniela Corda; Maria Di Girolamo
Journal:  EMBO J       Date:  2003-05-01       Impact factor: 11.598

Review 10.  The expanding field of poly(ADP-ribosyl)ation reactions. 'Protein Modifications: Beyond the Usual Suspects' Review Series.

Authors:  Antoinette Hakmé; Heng-Kuan Wong; Françoise Dantzer; Valérie Schreiber
Journal:  EMBO Rep       Date:  2008-10-17       Impact factor: 8.807

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  11 in total

1.  Structural basis for lack of ADP-ribosyltransferase activity in poly(ADP-ribose) polymerase-13/zinc finger antiviral protein.

Authors:  Tobias Karlberg; Mirjam Klepsch; Ann-Gerd Thorsell; C David Andersson; Anna Linusson; Herwig Schüler
Journal:  J Biol Chem       Date:  2015-01-29       Impact factor: 5.157

2.  Structural Basis for Potency and Promiscuity in Poly(ADP-ribose) Polymerase (PARP) and Tankyrase Inhibitors.

Authors:  Ann-Gerd Thorsell; Torun Ekblad; Tobias Karlberg; Mirjam Löw; Ana Filipa Pinto; Lionel Trésaugues; Martin Moche; Michael S Cohen; Herwig Schüler
Journal:  J Med Chem       Date:  2016-12-21       Impact factor: 7.446

Review 3.  Research Progress on Mono-ADP-Ribosyltransferases in Human Cell Biology.

Authors:  Yujie Gan; Huanhuan Sha; Renrui Zou; Miao Xu; Yuan Zhang; Jifeng Feng; Jianzhong Wu
Journal:  Front Cell Dev Biol       Date:  2022-05-16

4.  The NarE protein of Neisseria gonorrhoeae catalyzes ADP-ribosylation of several ADP-ribose acceptors despite an N-terminal deletion.

Authors:  Paula I Rodas; A Said Álamos-Musre; Francisca P Álvarez; Alejandro Escobar; Cecilia V Tapia; Eduardo Osorio; Carolina Otero; Iván L Calderón; Juan A Fuentes; Fernando Gil; Daniel Paredes-Sabja; Myron Christodoulides
Journal:  FEMS Microbiol Lett       Date:  2016-07-26       Impact factor: 2.742

Review 5.  PARP-1 mechanism for coupling DNA damage detection to poly(ADP-ribose) synthesis.

Authors:  Marie-France Langelier; John M Pascal
Journal:  Curr Opin Struct Biol       Date:  2013-01-16       Impact factor: 6.809

Review 6.  Structural biology of the writers, readers, and erasers in mono- and poly(ADP-ribose) mediated signaling.

Authors:  Tobias Karlberg; Marie-France Langelier; John M Pascal; Herwig Schüler
Journal:  Mol Aspects Med       Date:  2013-02-28

7.  Involvement of PARP-1 Val762Ala polymorphism in the onset of cervical cancer in caucasian women.

Authors:  Andrzej Roszak; Margarita Lianeri; Anna Sowińska; Paweł P Jagodziński
Journal:  Mol Diagn Ther       Date:  2013-08       Impact factor: 4.074

8.  Distribution of protein poly(ADP-ribosyl)ation systems across all domains of life.

Authors:  Dragutin Perina; Andreja Mikoč; Josip Ahel; Helena Ćetković; Roko Žaja; Ivan Ahel
Journal:  DNA Repair (Amst)       Date:  2014-05-25

Review 9.  Macrodomain-containing proteins: regulating new intracellular functions of mono(ADP-ribosyl)ation.

Authors:  Karla L H Feijs; Alexandra H Forst; Patricia Verheugd; Bernhard Lüscher
Journal:  Nat Rev Mol Cell Biol       Date:  2013-06-05       Impact factor: 94.444

Review 10.  The Significance of Targeting Poly (ADP-Ribose) Polymerase-1 in Pancreatic Cancer for Providing a New Therapeutic Paradigm.

Authors:  Keun-Yeong Jeong; Min Hee Park
Journal:  Int J Mol Sci       Date:  2021-03-29       Impact factor: 5.923

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