Literature DB >> 22657089

The tyrosine gate as a potential entropic lever in the receptor-binding site of the bacterial adhesin FimH.

Adinda Wellens1, Martina Lahmann, Mohamed Touaibia, Jonathan Vaucher, Stefan Oscarson, René Roy, Han Remaut, Julie Bouckaert.   

Abstract

Uropathogenic Escherichia coli (UPEC) are the major causative agents of urinary tract infections. During infection, UPEC adhere to mannosylated glycoreceptors on the urothelium via the FimH adhesin located at the tip of type 1 pili. Synthetic FimH antiadhesives such as alkyl and phenyl α-D-mannopyranosides are thus ideal candidates for the chemical interception of this crucial step in pathogenesis. The crystal structures of the FimH lectin domain in its ligand-free form and in complexes with eight medium- and high-affinity mannopyranoside inhibitors are presented. The thermodynamic profiles of the FimH-inhibitor interactions indicate that the binding of FimH to α-D-mannopyranose is enthalpy-driven and has a negative entropic change. Addition of a hydrophobic aglycon influences the binding enthalpy and can induce a favorable entropic change. The alleviation of the entropic cost is at least in part explained by increased dynamics in the tyrosine gate (Tyr48 and Tyr137) of the FimH receptor-binding site upon binding of the ligand. Ligands with a phenyl group directly linked to the anomeric oxygen of α-D-mannose introduce the largest dynamics into the Tyr48 side chain, because conjugation with the anomeric oxygen of α-D-mannose forces the aromatic aglycon into a conformation that comes into close contact (≈2.65 Å) with Tyr48. A propargyl group in this position predetermines the orientation of the aglycon and significantly decreases affinity. FimH has the highest affinity for α-D-mannopyranosides substituted with hydrophobic aglycons that are compatible in shape and electrostatic properties to the tyrosine gate, such as heptyl α-D-mannose.

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Year:  2012        PMID: 22657089     DOI: 10.1021/bi300251r

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  22 in total

1.  Evolutionary fine-tuning of conformational ensembles in FimH during host-pathogen interactions.

Authors:  Vasilios Kalas; Jerome S Pinkner; Thomas J Hannan; Michael E Hibbing; Karen W Dodson; Alex S Holehouse; Hao Zhang; Niraj H Tolia; Michael L Gross; Rohit V Pappu; James Janetka; Scott J Hultgren
Journal:  Sci Adv       Date:  2017-02-10       Impact factor: 14.136

Review 2.  Rational design strategies for FimH antagonists: new drugs on the horizon for urinary tract infection and Crohn's disease.

Authors:  Laurel K Mydock-McGrane; Thomas J Hannan; James W Janetka
Journal:  Expert Opin Drug Discov       Date:  2017-06-02       Impact factor: 6.098

3.  Conformational switch of the bacterial adhesin FimH in the absence of the regulatory domain: Engineering a minimalistic allosteric system.

Authors:  Said Rabbani; Brigitte Fiege; Deniz Eris; Marleen Silbermann; Roman Peter Jakob; Giulio Navarra; Timm Maier; Beat Ernst
Journal:  J Biol Chem       Date:  2017-11-27       Impact factor: 5.157

4.  Validation of Reactivity Descriptors to Assess the Aromatic Stacking within the Tyrosine Gate of FimH.

Authors:  Goedele Roos; Adinda Wellens; Mohamed Touaibia; Nao Yamakawa; Paul Geerlings; René Roy; Lode Wyns; Julie Bouckaert
Journal:  ACS Med Chem Lett       Date:  2013-09-13       Impact factor: 4.345

Review 5.  Neutralizing Antibodies Against Allosteric Proteins: Insights From a Bacterial Adhesin.

Authors:  Evgeni V Sokurenko; Veronika Tchesnokova; Gianluca Interlandi; Rachel Klevit; Wendy E Thomas
Journal:  J Mol Biol       Date:  2022-07-04       Impact factor: 6.151

6.  RMSD analysis of structures of the bacterial protein FimH identifies five conformations of its lectin domain.

Authors:  Pearl Magala; Rachel E Klevit; Wendy E Thomas; Evgeni V Sokurenko; Ronald E Stenkamp
Journal:  Proteins       Date:  2019-11-05

7.  Structures of C-mannosylated anti-adhesives bound to the type 1 fimbrial FimH adhesin.

Authors:  Jerome de Ruyck; Marc F Lensink; Julie Bouckaert
Journal:  IUCrJ       Date:  2016-02-26       Impact factor: 4.769

8.  Development of Heptylmannoside-Based Glycoconjugate Antiadhesive Compounds against Adherent-Invasive Escherichia coli Bacteria Associated with Crohn's Disease.

Authors:  Adeline Sivignon; Xibo Yan; Dimitri Alvarez Dorta; Richard Bonnet; Julie Bouckaert; Etienne Fleury; Julien Bernard; Sébastien G Gouin; Arlette Darfeuille-Michaud; Nicolas Barnich
Journal:  mBio       Date:  2015-11-17       Impact factor: 7.867

9.  Effect of Aminophenyl and Aminothiahexyl α-D-Glycosides of the Manno-, Gluco-, and Galacto-Series on Type 1 Fimbriae-Mediated Adhesion of Escherichia coli.

Authors:  Claudia Fessele; Thisbe K Lindhorst
Journal:  Biology (Basel)       Date:  2013-09-03

10.  Why a diaminopyrrolic tripodal receptor binds mannosides in acetonitrile but not in water?

Authors:  Diogo Vila-Viçosa; Oscar Francesconi; Miguel Machuqueiro
Journal:  Beilstein J Org Chem       Date:  2014-07-03       Impact factor: 2.883

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