Literature DB >> 22653848

Efficient modeling of symmetric protein aggregates from NMR data.

Benjamin Bardiaux1, Barth-Jan van Rossum, Michael Nilges, Hartmut Oschkinat.   

Abstract

An efficient approach to determine the structures of symmetric protein aggregates from liquid and solid-state NMR data is presented. Any symmetry can be used (cyclic or dihedral point symmetries, helical symmetries, crystallographic symmetries). Because the starting point is the random structure of the monomer, the knowledge of the 3D structure of the monomer is not required.
Copyright © 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2012        PMID: 22653848     DOI: 10.1002/anie.201201783

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  6 in total

1.  Membrane-protein structure determination by solid-state NMR spectroscopy of microcrystals.

Authors:  Shakeel Ahmad Shahid; Benjamin Bardiaux; W Trent Franks; Ludwig Krabben; Michael Habeck; Barth-Jan van Rossum; Dirk Linke
Journal:  Nat Methods       Date:  2012-11-11       Impact factor: 28.547

2.  Xplor-NIH for molecular structure determination from NMR and other data sources.

Authors:  Charles D Schwieters; Guillermo A Bermejo; G Marius Clore
Journal:  Protein Sci       Date:  2017-09-18       Impact factor: 6.725

3.  Structure determination of helical filaments by solid-state NMR spectroscopy.

Authors:  Lichun He; Benjamin Bardiaux; Mumdooh Ahmed; Johannes Spehr; Renate König; Heinrich Lünsdorf; Ulfert Rand; Thorsten Lührs; Christiane Ritter
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-05       Impact factor: 11.205

4.  In situ high-resolution structure of the baseplate antenna complex in Chlorobaculum tepidum.

Authors:  Jakob Toudahl Nielsen; Natalia V Kulminskaya; Morten Bjerring; Juha M Linnanto; Margus Rätsep; Marie Østergaard Pedersen; Petar H Lambrev; Márta Dorogi; Győző Garab; Karen Thomsen; Caroline Jegerschöld; Niels-Ulrik Frigaard; Martin Lindahl; Niels Chr Nielsen
Journal:  Nat Commun       Date:  2016-08-18       Impact factor: 14.919

5.  Dynamics of a type 2 secretion system pseudopilus unraveled by complementary approaches.

Authors:  Benjamin Bardiaux; Florence Cordier; Sébastien Brier; Aracelys López-Castilla; Nadia Izadi-Pruneyre; Michael Nilges
Journal:  J Biomol NMR       Date:  2019-05-23       Impact factor: 2.835

Review 6.  Solid-State NMR for Studying the Structure and Dynamics of Viral Assemblies.

Authors:  Lauriane Lecoq; Marie-Laure Fogeron; Beat H Meier; Michael Nassal; Anja Böckmann
Journal:  Viruses       Date:  2020-09-24       Impact factor: 5.048

  6 in total

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