Literature DB >> 22644704

Mechanism and stem-cell activity of 5-carboxycytosine decarboxylation determined by isotope tracing.

Stefan Schiesser1, Benjamin Hackner, Toni Pfaffeneder, Markus Müller, Christian Hagemeier, Matthias Truss, Thomas Carell.   

Abstract

Eraserhead: Stem cells seem to erase epigenetic information by decarboxylation of the newly discovered epigenetic base 5-carboxycytosine (caC; see picture). This reaction is likely to involve a nucleophilic attack of the C5-C6 double bond.
Copyright © 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2012        PMID: 22644704     DOI: 10.1002/anie.201202583

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  54 in total

1.  Crystal structures of isoorotate decarboxylases reveal a novel catalytic mechanism of 5-carboxyl-uracil decarboxylation and shed light on the search for DNA decarboxylase.

Authors:  Shutong Xu; Wenjing Li; Junjun Zhu; Rong Wang; Zheng Li; Guo-Liang Xu; Jianping Ding
Journal:  Cell Res       Date:  2013-08-06       Impact factor: 25.617

Review 2.  Toward pluripotency by reprogramming: mechanisms and application.

Authors:  Tao Wang; Stephen T Warren; Peng Jin
Journal:  Protein Cell       Date:  2013-11       Impact factor: 14.870

3.  Reversing DNA methylation: mechanisms, genomics, and biological functions.

Authors:  Hao Wu; Yi Zhang
Journal:  Cell       Date:  2014-01-16       Impact factor: 41.582

Review 4.  Mechanism and function of oxidative reversal of DNA and RNA methylation.

Authors:  Li Shen; Chun-Xiao Song; Chuan He; Yi Zhang
Journal:  Annu Rev Biochem       Date:  2014       Impact factor: 23.643

Review 5.  Transcriptional and epigenetic mechanisms of cellular reprogramming to induced pluripotency.

Authors:  Mark van den Hurk; Gunter Kenis; Cedric Bardy; Daniel L van den Hove; Fred H Gage; Harry W Steinbusch; Bart P Rutten
Journal:  Epigenomics       Date:  2016-07-15       Impact factor: 4.778

6.  5-Formylcytosine to cytosine conversion by C-C bond cleavage in vivo.

Authors:  Katharina Iwan; René Rahimoff; Angie Kirchner; Fabio Spada; Arne S Schröder; Olesea Kosmatchev; Shqiponja Ferizaj; Jessica Steinbacher; Edris Parsa; Markus Müller; Thomas Carell
Journal:  Nat Chem Biol       Date:  2017-11-27       Impact factor: 15.040

Review 7.  Genomics and epigenomics in rheumatic diseases: what do they provide in terms of diagnosis and disease management?

Authors:  Patricia Castro-Santos; Roberto Díaz-Peña
Journal:  Clin Rheumatol       Date:  2017-07-20       Impact factor: 2.980

8.  Complementary Steric Engineering at the Protein-Ligand Interface for Analogue-Sensitive TET Oxygenases.

Authors:  Babu Sudhamalla; Sinan Wang; Valerie Snyder; Sam Kavoosi; Simran Arora; Kabirul Islam
Journal:  J Am Chem Soc       Date:  2018-08-02       Impact factor: 15.419

Review 9.  DNA methylation and methylcytosine oxidation in cell fate decisions.

Authors:  Kian Peng Koh; Anjana Rao
Journal:  Curr Opin Cell Biol       Date:  2013-03-14       Impact factor: 8.382

Review 10.  Role of Base Excision "Repair" Enzymes in Erasing Epigenetic Marks from DNA.

Authors:  Alexander C Drohat; Christopher T Coey
Journal:  Chem Rev       Date:  2016-08-08       Impact factor: 60.622

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