Literature DB >> 22644502

Straight lines of neutron scattering in biology: a review of basic controls in SANS and EINS.

Giuseppe Zaccai1.   

Abstract

Neutron and X-ray beams in scattering experiments have similar wavelengths and explore the same length scale (~1 Å or 0.1 nm). Data collection and analysis are also broadly similar for both radiation types. There are fundamental differences, however, between the interaction of X-rays and neutrons with matter, which makes them strongly complementary for structural studies in biology. The property of neutrons to distinguish natural abundance hydrogen from its deuterium isotope and the dispersion relation that leads to the energy of ~1 Å neutrons being of the order of thermal energy are well known. They form the basis, respectively, of contrast variation on the one hand and energy-resolved scattering experiments to study macromolecular dynamics-neutron-specific scattering methods on the other. Interestingly, analysis procedures for the structural and dynamics experiments display common aspects that can be expressed as straight-line relationships. These not only act as controls of good sample preparation, but also yield model-free parameters on an absolute scale that provide fundamental information on the structure and dynamics of the system under study.

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Year:  2012        PMID: 22644502     DOI: 10.1007/s00249-012-0825-5

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  16 in total

Review 1.  How soft is a protein? A protein dynamics force constant measured by neutron scattering.

Authors:  G Zaccai
Journal:  Science       Date:  2000-06-02       Impact factor: 47.728

2.  Protein dynamics in solution and powder measured by incoherent elastic neutron scattering: the influence of Q-range and energy resolution.

Authors:  Frank Gabel
Journal:  Eur Biophys J       Date:  2004-09-16       Impact factor: 1.733

3.  Small-angle scattering and its interplay with crystallography, contrast variation in SAXS and SANS.

Authors:  Heinrich B Stuhrmann
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Antico-operative binding of initiator transfer RNAMet to methionyl-transfer RNA synthetase from Escherichia coli: neutron scattering studies.

Authors:  P Dessen; S Blanquet; G Zaccai; B Jacrot
Journal:  J Mol Biol       Date:  1978-12-15       Impact factor: 5.469

Review 5.  Small angle neutron scattering.

Authors:  G Zaccaï; B Jacrot
Journal:  Annu Rev Biophys Bioeng       Date:  1983

6.  Structure of phenylalanine-accepting transfer ribonucleic acid and of its environment in aqueous solvents with different salts.

Authors:  Z Q Li; R Giegé; B Jacrot; R Oberthür; J C Thierry; G Zaccaï
Journal:  Biochemistry       Date:  1983-09-13       Impact factor: 3.162

7.  Assessment of the aggregation state of integral membrane proteins in reconstituted phospholipid vesicles using small angle neutron scattering.

Authors:  J F Hunt; P D McCrea; G Zaccaï; D M Engelman
Journal:  J Mol Biol       Date:  1997-11-14       Impact factor: 5.469

8.  Modular structure of solubilized human apolipoprotein B-100. Low resolution model revealed by small angle neutron scattering.

Authors:  Alexander Johs; Michal Hammel; Ines Waldner; Roland P May; Peter Laggner; Ruth Prassl
Journal:  J Biol Chem       Date:  2006-05-16       Impact factor: 5.157

9.  Solvent isotope effect on macromolecular dynamics in E. coli.

Authors:  Marion Jasnin; Moeava Tehei; Martine Moulin; Michael Haertlein; Giuseppe Zaccai
Journal:  Eur Biophys J       Date:  2008-02-20       Impact factor: 1.733

10.  Neutron small angle scattering on selectively deuterated human plasma low density lipoproteins. The location of polar phospholipid headgroups.

Authors:  P Laggner; G M Kostner; U Rakusch; D Worcester
Journal:  J Biol Chem       Date:  1981-11-25       Impact factor: 5.157

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  5 in total

1.  Preparing monodisperse macromolecular samples for successful biological small-angle X-ray and neutron-scattering experiments.

Authors:  Cy M Jeffries; Melissa A Graewert; Clément E Blanchet; David B Langley; Andrew E Whitten; Dmitri I Svergun
Journal:  Nat Protoc       Date:  2016-10-06       Impact factor: 13.491

2.  Deuterium Labeling Together with Contrast Variation Small-Angle Neutron Scattering Suggests How Skp Captures and Releases Unfolded Outer Membrane Proteins.

Authors:  Nathan R Zaccai; Clifford W Sandlin; James T Hoopes; Joseph E Curtis; Patrick J Fleming; Karen G Fleming; Susan Krueger
Journal:  Methods Enzymol       Date:  2015-08-06       Impact factor: 1.600

Review 3.  Investigating Structure and Dynamics of Proteins in Amorphous Phases Using Neutron Scattering.

Authors:  Maria Monica Castellanos; Arnold McAuley; Joseph E Curtis
Journal:  Comput Struct Biotechnol J       Date:  2016-12-21       Impact factor: 7.271

4.  Intrinsic disorder in the partitioning protein KorB persists after co-operative complex formation with operator DNA and KorA.

Authors:  Eva I Hyde; Philip Callow; Karthik V Rajasekar; Peter Timmins; Trushar R Patel; Giuliano Siligardi; Rohanah Hussain; Scott A White; Christopher M Thomas; David J Scott
Journal:  Biochem J       Date:  2017-08-30       Impact factor: 3.857

5.  Thylakoid membrane reorganizations revealed by small-angle neutron scattering of Monstera deliciosa leaves associated with non-photochemical quenching.

Authors:  Renáta Ünnep; Suman Paul; Ottó Zsiros; László Kovács; Noémi K Székely; Gábor Steinbach; Marie-Sousai Appavou; Lionel Porcar; Alfred R Holzwarth; Győző Garab; Gergely Nagy
Journal:  Open Biol       Date:  2020-09-16       Impact factor: 6.411

  5 in total

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