Literature DB >> 22642621

A trait-based approach for modelling microbial litter decomposition.

S D Allison1.   

Abstract

Trait-based models are an emerging tool in ecology with the potential to link community dynamics, environmental responses and ecosystem processes. These models represent complex communities by defining taxa with trait combinations derived from prior distributions that may be constrained by trade-offs. Herein I develop a model that links microbial community composition with physiological and enzymatic traits to predict litter decomposition rates. This approach allows for trade-offs among traits that represent alternative microbial strategies for resource acquisition. The model predicts that optimal strategies depend on the level of enzyme production in the whole community, which determines resource availability and decomposition rates. There is also evidence for facilitation and competition among microbial taxa that co-occur on decomposing litter. These interactions vary with community investment in extracellular enzyme production and the magnitude of trade-offs affecting enzyme biochemical traits. The model accounted for 69% of the variation in decomposition rates of 15 Hawaiian litter types and up to 26% of the variation in enzyme activities. By explicitly representing diversity, trait-based models can predict ecosystem processes based on functional trait distributions in a community. The model developed herein illustrates that traits influencing microbial enzyme production are some of the key controls on litter decomposition rates.
© 2012 Blackwell Publishing Ltd/CNRS.

Mesh:

Substances:

Year:  2012        PMID: 22642621     DOI: 10.1111/j.1461-0248.2012.01807.x

Source DB:  PubMed          Journal:  Ecol Lett        ISSN: 1461-023X            Impact factor:   9.492


  64 in total

Review 1.  Patterns and processes of microbial community assembly.

Authors:  Diana R Nemergut; Steven K Schmidt; Tadashi Fukami; Sean P O'Neill; Teresa M Bilinski; Lee F Stanish; Joseph E Knelman; John L Darcy; Ryan C Lynch; Phillip Wickey; Scott Ferrenberg
Journal:  Microbiol Mol Biol Rev       Date:  2013-09       Impact factor: 11.056

Review 2.  Fungal traits that drive ecosystem dynamics on land.

Authors:  Kathleen K Treseder; Jay T Lennon
Journal:  Microbiol Mol Biol Rev       Date:  2015-06       Impact factor: 11.056

3.  Microbial response to simulated global change is phylogenetically conserved and linked with functional potential.

Authors:  Anthony S Amend; Adam C Martiny; Steven D Allison; Renaud Berlemont; Michael L Goulden; Ying Lu; Kathleen K Treseder; Claudia Weihe; Jennifer B H Martiny
Journal:  ISME J       Date:  2015-06-05       Impact factor: 10.302

4.  Microdiversity of extracellular enzyme genes among sequenced prokaryotic genomes.

Authors:  Amy E Zimmerman; Adam C Martiny; Steven D Allison
Journal:  ISME J       Date:  2013-01-10       Impact factor: 10.302

5.  Imaging spectroscopy links aspen genotype with below-ground processes at landscape scales.

Authors:  Michael D Madritch; Clayton C Kingdon; Aditya Singh; Karen E Mock; Richard L Lindroth; Philip A Townsend
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2014-04-14       Impact factor: 6.237

6.  Effects of dispersal and selection on stochastic assembly in microbial communities.

Authors:  Sarah Evans; Jennifer B H Martiny; Steven D Allison
Journal:  ISME J       Date:  2016-08-05       Impact factor: 10.302

Review 7.  An overview of agent-based models in plant biology and ecology.

Authors:  Bo Zhang; Donald L DeAngelis
Journal:  Ann Bot       Date:  2020-09-14       Impact factor: 4.357

8.  The ecology of heterogeneity: soil bacterial communities and C dynamics.

Authors:  Naoise Nunan; Hannes Schmidt; Xavier Raynaud
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-03-23       Impact factor: 6.237

9.  A multi-scale eco-evolutionary model of cooperation reveals how microbial adaptation influences soil decomposition.

Authors:  Elsa Abs; Hélène Leman; Régis Ferrière
Journal:  Commun Biol       Date:  2020-09-21

10.  Mathematical modeling of primary succession of murine intestinal microbiota.

Authors:  Simeone Marino; Nielson T Baxter; Gary B Huffnagle; Joseph F Petrosino; Patrick D Schloss
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-23       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.