Literature DB >> 22642488

Electromagnetic torque tweezers: a versatile approach for measurement of single-molecule twist and torque.

Xander J A Janssen1, Jan Lipfert, Tessa Jager, Renier Daudey, Jaap Beekman, Nynke H Dekker.   

Abstract

The well-established single-molecule force-spectroscopy techniques have recently been complemented by methods that can measure torque and twist directly, notably magnetic torque tweezers and the optical torque wrench. A limitation of the current torque measurement schemes is the intrinsic coupling between the force and torque degrees of freedom. Here we present electromagnetic torque tweezers (eMTT) that combine permanent and electromagnets to enable independent control of the force and torsional trap stiffness for sensitive measurements of single molecule torque and twist. Using the eMTT, we demonstrate sensitive torque measurements on tethered DNA molecules from simple tracking of the beads' (x,y)-position, obviating the need for any angular tracking algorithms or markers. Employing the eMTT for high-resolution torque measurements, we experimentally confirm the theoretically predicted torque overshoot at the DNA buckling transition in high salt conditions. We envision that the flexibility and control afforded by the eMTT will enable a range of new torque and twist measurement schemes from single-molecules to living cells.

Entities:  

Year:  2012        PMID: 22642488     DOI: 10.1021/nl301330h

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  26 in total

1.  Double-stranded RNA under force and torque: similarities to and striking differences from double-stranded DNA.

Authors:  Jan Lipfert; Gary M Skinner; Johannes M Keegstra; Toivo Hensgens; Tessa Jager; David Dulin; Mariana Köber; Zhongbo Yu; Serge P Donkers; Fang-Chieh Chou; Rhiju Das; Nynke H Dekker
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-13       Impact factor: 11.205

2.  Ephemeral states in protein folding under force captured with a magnetic tweezers design.

Authors:  Rafael Tapia-Rojo; Edward C Eckels; Julio M Fernández
Journal:  Proc Natl Acad Sci U S A       Date:  2019-04-01       Impact factor: 11.205

3.  Simple horizontal magnetic tweezers for micromanipulation of single DNA molecules and DNA-protein complexes.

Authors:  Christopher P McAndrew; Christopher Tyson; Joseph Zischkau; Patrick Mehl; Pamela L Tuma; Ian L Pegg; Abhijit Sarkar
Journal:  Biotechniques       Date:  2016-01-01       Impact factor: 1.993

4.  Invincible DNA tethers: covalent DNA anchoring for enhanced temporal and force stability in magnetic tweezers experiments.

Authors:  Richard Janissen; Bojk A Berghuis; David Dulin; Max Wink; Theo van Laar; Nynke H Dekker
Journal:  Nucleic Acids Res       Date:  2014-08-19       Impact factor: 16.971

5.  Optomagnetically Controlled Microparticles Manufactured with Glancing Angle Deposition.

Authors:  Joseph L Lawson; Nathan J Jenness; Robert L Clark
Journal:  Part Part Syst Charact       Date:  2015-05-22       Impact factor: 3.310

6.  Quantifying the Precision of Single-Molecule Torque and Twist Measurements Using Allan Variance.

Authors:  Maarten M van Oene; Seungkyu Ha; Tessa Jager; Mina Lee; Francesco Pedaci; Jan Lipfert; Nynke H Dekker
Journal:  Biophys J       Date:  2018-04-24       Impact factor: 4.033

7.  The temperature dependence of the helical twist of DNA.

Authors:  Franziska Kriegel; Christian Matek; Tomáš Dršata; Klara Kulenkampff; Sophie Tschirpke; Martin Zacharias; Filip Lankaš; Jan Lipfert
Journal:  Nucleic Acids Res       Date:  2018-09-06       Impact factor: 16.971

8.  Transfer-matrix calculations of the effects of tension and torque constraints on DNA-protein interactions.

Authors:  Artem K Efremov; Jie Yan
Journal:  Nucleic Acids Res       Date:  2018-07-27       Impact factor: 16.971

9.  Defect-facilitated buckling in supercoiled double-helix DNA.

Authors:  Sumitabha Brahmachari; Andrew Dittmore; Yasuharu Takagi; Keir C Neuman; John F Marko
Journal:  Phys Rev E       Date:  2018-02       Impact factor: 2.529

10.  Torque spectroscopy of DNA: base-pair stability, boundary effects, backbending, and breathing dynamics.

Authors:  Florian C Oberstrass; Louis E Fernandes; Paul Lebel; Zev Bryant
Journal:  Phys Rev Lett       Date:  2013-04-25       Impact factor: 9.161

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