Literature DB >> 22626249

Construction of covalent membrane protein complexes and high-throughput selection of membrane mimics.

Jae-Eun Suk1, Alan J Situ, Tobias S Ulmer.   

Abstract

The association of transmembrane (TM) helices underlies membrane protein structure and folding. Structural studies of TM complexes are limited by complex stability and the often time-consuming selection of suitable membrane mimics. Here, methodology for the efficient, preparative scale construction of covalent TM complexes and the concomitant high-throughput selection of membrane mimics is introduced. For the employed integrin αIIbβ3 model system, the methodology identified phospholipid bicelles, including their specific composition, as the best membrane mimic. The method facilitates structure determination by NMR spectroscopy as exemplified by the measurement of previously inaccessible residual dipolar couplings and (15)N relaxation parameters.

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Year:  2012        PMID: 22626249      PMCID: PMC3415561          DOI: 10.1021/ja304247f

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  29 in total

1.  Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.

Authors:  A Krogh; B Larsson; G von Heijne; E L Sonnhammer
Journal:  J Mol Biol       Date:  2001-01-19       Impact factor: 5.469

2.  Residue-specific vibrational echoes yield 3D structures of a transmembrane helix dimer.

Authors:  Amanda Remorino; Ivan V Korendovych; Yibing Wu; William F DeGrado; Robin M Hochstrasser
Journal:  Science       Date:  2011-06-03       Impact factor: 47.728

3.  Structure of the integrin beta3 transmembrane segment in phospholipid bicelles and detergent micelles.

Authors:  Tong-Lay Lau; Anthony W Partridge; Mark H Ginsberg; Tobias S Ulmer
Journal:  Biochemistry       Date:  2008-03-06       Impact factor: 3.162

4.  The structure of the integrin alphaIIbbeta3 transmembrane complex explains integrin transmembrane signalling.

Authors:  Tong-Lay Lau; Chungho Kim; Mark H Ginsberg; Tobias S Ulmer
Journal:  EMBO J       Date:  2009-03-12       Impact factor: 11.598

5.  A transmembrane helix dimer: structure and implications.

Authors:  K R MacKenzie; J H Prestegard; D M Engelman
Journal:  Science       Date:  1997-04-04       Impact factor: 47.728

6.  An environment-dependent structural switch underlies the regulation of carnitine palmitoyltransferase 1A.

Authors:  Jampani N Rao; Gemma Z L Warren; Sara Estolt-Povedano; Victor A Zammit; Tobias S Ulmer
Journal:  J Biol Chem       Date:  2011-10-11       Impact factor: 5.157

7.  Opsin stability and folding: modulation by phospholipid bicelles.

Authors:  Craig McKibbin; Nicola A Farmer; Chris Jeans; Philip J Reeves; H Gobind Khorana; B A Wallace; Patricia C Edwards; Claudio Villa; Paula J Booth
Journal:  J Mol Biol       Date:  2007-10-13       Impact factor: 5.469

8.  Interactions of platelet integrin alphaIIb and beta3 transmembrane domains in mammalian cell membranes and their role in integrin activation.

Authors:  Chungho Kim; Tong-Lay Lau; Tobias S Ulmer; Mark H Ginsberg
Journal:  Blood       Date:  2009-02-13       Impact factor: 22.113

9.  The structure of a receptor with two associating transmembrane domains on the cell surface: integrin alphaIIbbeta3.

Authors:  Jieqing Zhu; Bing-Hao Luo; Patrick Barth; Jack Schonbrun; David Baker; Timothy A Springer
Journal:  Mol Cell       Date:  2009-04-24       Impact factor: 17.970

10.  High-affinity binders selected from designed ankyrin repeat protein libraries.

Authors:  H Kaspar Binz; Patrick Amstutz; Andreas Kohl; Michael T Stumpp; Christophe Briand; Patrik Forrer; Markus G Grütter; Andreas Plückthun
Journal:  Nat Biotechnol       Date:  2004-04-18       Impact factor: 54.908

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  7 in total

1.  Annular anionic lipids stabilize the integrin αIIbβ3 transmembrane complex.

Authors:  Thomas Schmidt; Jae-Eun Suk; Feng Ye; Alan J Situ; Parichita Mazumder; Mark H Ginsberg; Tobias S Ulmer
Journal:  J Biol Chem       Date:  2015-01-29       Impact factor: 5.157

2.  A Conserved Ectodomain-Transmembrane Domain Linker Motif Tunes the Allosteric Regulation of Cell Surface Receptors.

Authors:  Thomas Schmidt; Feng Ye; Alan J Situ; Woojin An; Mark H Ginsberg; Tobias S Ulmer
Journal:  J Biol Chem       Date:  2016-06-30       Impact factor: 5.157

3.  Structural and thermodynamic basis of proline-induced transmembrane complex stabilization.

Authors:  Thomas Schmidt; Alan J Situ; Tobias S Ulmer
Journal:  Sci Rep       Date:  2016-07-20       Impact factor: 4.379

Review 4.  The magic of bicelles lights up membrane protein structure.

Authors:  Ulrich H N Dürr; Melissa Gildenberg; Ayyalusamy Ramamoorthy
Journal:  Chem Rev       Date:  2012-08-24       Impact factor: 60.622

5.  Integrin α1 has a long helix, extending from the transmembrane region to the cytoplasmic tail in detergent micelles.

Authors:  Chaohua Lai; Xiaoxi Liu; Changlin Tian; Fangming Wu
Journal:  PLoS One       Date:  2013-04-30       Impact factor: 3.240

6.  Transmembrane and Juxtamembrane Structure of αL Integrin in Bicelles.

Authors:  Wahyu Surya; Yan Li; Oscar Millet; Tammo Diercks; Jaume Torres
Journal:  PLoS One       Date:  2013-09-12       Impact factor: 3.240

7.  Structural model of the SARS coronavirus E channel in LMPG micelles.

Authors:  Wahyu Surya; Yan Li; Jaume Torres
Journal:  Biochim Biophys Acta Biomembr       Date:  2018-02-21       Impact factor: 3.747

  7 in total

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