Literature DB >> 22617796

Polycistronic coexpression and nondenaturing purification of histone octamers.

Yoonjung Shim1, Ming-Rui Duan, Xuejing Chen, Michael J Smerdon, Jung-Hyun Min.   

Abstract

Histone octamers are the basic building blocks of chromatin and are platforms for diverse genetic mechanisms. We report a simple method for preparing recombinant histone octamers by overexpressing all four histones from a single polycistronic vector followed by standard chromatography under native conditions. This approach reduces the time needed for the octamer preparation to a single day and should be applicable to making a variety of unmodified and modified histone octamers.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22617796      PMCID: PMC3412673          DOI: 10.1016/j.ab.2012.05.006

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  14 in total

1.  Preparation of nucleosome core particle from recombinant histones.

Authors:  K Luger; T J Rechsteiner; T J Richmond
Journal:  Methods Enzymol       Date:  1999       Impact factor: 1.600

Review 2.  Expression and purification of recombinant histones and nucleosome reconstitution.

Authors:  K Luger; T J Rechsteiner; T J Richmond
Journal:  Methods Mol Biol       Date:  1999

3.  Histones H2a, H2b, H3, and H4 form a tetrameric complex in solutions of high salt.

Authors:  H Weintraub; K Palter; F Van Lente
Journal:  Cell       Date:  1975-09       Impact factor: 41.582

4.  Nucleosomes facilitate their own invasion.

Authors:  Gu Li; Jonathan Widom
Journal:  Nat Struct Mol Biol       Date:  2004-07-18       Impact factor: 15.369

5.  Reconstitution of nucleosome core particles from recombinant histones and DNA.

Authors:  Pamela N Dyer; Raji S Edayathumangalam; Cindy L White; Yunhe Bao; Srinivas Chakravarthy; Uma M Muthurajan; Karolin Luger
Journal:  Methods Enzymol       Date:  2004       Impact factor: 1.600

6.  Co-expression as a convenient method for the production and purification of core histones in bacteria.

Authors:  Megan Anderson; Joon H Huh; Thien Ngo; Alice Lee; Genaro Hernandez; Joy Pang; Jennifer Perkins; Robert N Dutnall
Journal:  Protein Expr Purif       Date:  2010-03-27       Impact factor: 1.650

Review 7.  Histones: annotating chromatin.

Authors:  Eric I Campos; Danny Reinberg
Journal:  Annu Rev Genet       Date:  2009       Impact factor: 16.830

8.  New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning.

Authors:  P T Lowary; J Widom
Journal:  J Mol Biol       Date:  1998-02-13       Impact factor: 5.469

9.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

10.  UV damage in DNA promotes nucleosome unwrapping.

Authors:  Ming-Rui Duan; Michael J Smerdon
Journal:  J Biol Chem       Date:  2010-06-19       Impact factor: 5.157

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  21 in total

1.  Two Loops Undergoing Concerted Dynamics Regulate the Activity of the ASH1L Histone Methyltransferase.

Authors:  David S Rogawski; Juliano Ndoj; Hyo Je Cho; Ivan Maillard; Jolanta Grembecka; Tomasz Cierpicki
Journal:  Biochemistry       Date:  2015-08-25       Impact factor: 3.162

2.  Insights from biochemical reconstitution into the architecture of human kinetochores.

Authors:  John R Weir; Alex C Faesen; Kerstin Klare; Arsen Petrovic; Federica Basilico; Josef Fischböck; Satyakrishna Pentakota; Jenny Keller; Marion E Pesenti; Dongqing Pan; Doro Vogt; Sabine Wohlgemuth; Franz Herzog; Andrea Musacchio
Journal:  Nature       Date:  2016-08-31       Impact factor: 49.962

3.  One-pot refolding of core histones from bacterial inclusion bodies allows rapid reconstitution of histone octamer.

Authors:  Young-Tae Lee; Garrett Gibbons; Shirley Y Lee; Zaneta Nikolovska-Coleska; Yali Dou
Journal:  Protein Expr Purif       Date:  2015-02-14       Impact factor: 1.650

4.  A cassette of basic amino acids in histone H2B regulates nucleosome dynamics and access to DNA damage.

Authors:  Yesenia Rodriguez; Mingrui Duan; John J Wyrick; Michael J Smerdon
Journal:  J Biol Chem       Date:  2018-03-27       Impact factor: 5.157

5.  Histone H3 lysine 14 (H3K14) acetylation facilitates DNA repair in a positioned nucleosome by stabilizing the binding of the chromatin Remodeler RSC (Remodels Structure of Chromatin).

Authors:  Ming-Rui Duan; Michael J Smerdon
Journal:  J Biol Chem       Date:  2014-02-10       Impact factor: 5.157

6.  Reconstitution and Purification of Nucleosomes with Recombinant Histones and Purified DNA.

Authors:  Ilana M Nodelman; Ashok Patel; Robert F Levendosky; Gregory D Bowman
Journal:  Curr Protoc Mol Biol       Date:  2020-12

7.  Rapid movement and transcriptional re-localization of human cohesin on DNA.

Authors:  Iain F Davidson; Daniela Goetz; Maciej P Zaczek; Maxim I Molodtsov; Pim J Huis In 't Veld; Florian Weissmann; Gabriele Litos; David A Cisneros; Maria Ocampo-Hafalla; Rene Ladurner; Frank Uhlmann; Alipasha Vaziri; Jan-Michael Peters
Journal:  EMBO J       Date:  2016-10-31       Impact factor: 11.598

8.  Histone octamer rearranges to adapt to DNA unwrapping.

Authors:  Silvija Bilokapic; Mike Strauss; Mario Halic
Journal:  Nat Struct Mol Biol       Date:  2017-12-11       Impact factor: 15.369

9.  Cryoelectron Microscopy Structure of a Yeast Centromeric Nucleosome at 2.7 Å Resolution.

Authors:  David Migl; Marc Kschonsak; Christopher P Arthur; Yadana Khin; Stephen C Harrison; Claudio Ciferri; Yoana N Dimitrova
Journal:  Structure       Date:  2020-01-30       Impact factor: 5.006

10.  Rapid purification of recombinant histones.

Authors:  Henrike Klinker; Caroline Haas; Nadine Harrer; Peter B Becker; Felix Mueller-Planitz
Journal:  PLoS One       Date:  2014-08-04       Impact factor: 3.240

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