Literature DB >> 22614827

The role of the 3' untranslated region in post-transcriptional regulation of protein expression in mammalian cells.

Eva Matoulkova1, Eva Michalova, Borivoj Vojtesek, Roman Hrstka.   

Abstract

The untranslated regions (UTRs) at the 3'end of mRNA transcripts contain important sequences that influence the fate of mRNA and thus proteosynthesis. In this review, we summarize the information known to date about 3'end processing, sequence characteristics including related binding proteins and the role of 3'UTRs in several selected signaling pathways to delineate their importance in the regulatory processes in mammalian cells. In addition to reviewing recent advances in the more well known aspects, such as cleavage and polyadenylation processes that influence mRNA stability and location, we concentrate on some newly emerging concepts of the role of the 3'UTR, including alternative polyadenylation sites in relation to proliferation and differentiation and the recognition of the multi-functional properties of non-coding RNAs, including miRNAs that commonly target the 3'UTR. The emerging picture is of a highly complex set of regulatory systems that include autoregulation, cooperativity and competition to fine tune proteosynthesis in context-dependent manners.

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Year:  2012        PMID: 22614827     DOI: 10.4161/rna.20231

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  137 in total

1.  The superoxide dismutase 1 3'UTR maintains high expression of the SOD1 gene in cancer cells: The involvement of the RNA-binding protein AUF-1.

Authors:  Shuyu Zhang; Jing Xue; Jie Zheng; Shuai Wang; Jundong Zhou; Yang Jiao; Yangyang Geng; Jinchang Wu; Bethany N Hannafon; Wei-Qun Ding
Journal:  Free Radic Biol Med       Date:  2015-04-20       Impact factor: 7.376

2.  Transcriptional and post-transcriptional upregulation of p27 mediates growth inhibition of isorhapontigenin (ISO) on human bladder cancer cells.

Authors:  Guosong Jiang; Chao Huang; Jingxia Li; Haishan Huang; Jingjing Wang; Yawei Li; Fei Xie; Honglei Jin; Junlan Zhu; Chuanshu Huang
Journal:  Carcinogenesis       Date:  2018-03-08       Impact factor: 4.944

3.  High-throughput screening for chemical modulators of post-transcriptionally regulated genes.

Authors:  Viktoryia Sidarovich; Valentina Adami; Alessandro Quattrone
Journal:  J Vis Exp       Date:  2015-03-03       Impact factor: 1.355

4.  Alternative polyadenylation coordinates embryonic development, sexual dimorphism and longitudinal growth in Xenopus tropicalis.

Authors:  Xiang Zhou; Yangzi Zhang; Jennifer J Michal; Lujiang Qu; Shuwen Zhang; Mark R Wildung; Weiwei Du; Derek J Pouchnik; Hui Zhao; Yin Xia; Honghua Shi; Guoli Ji; Jon F Davis; Gary D Smith; Michael D Griswold; Richard M Harland; Zhihua Jiang
Journal:  Cell Mol Life Sci       Date:  2019-02-07       Impact factor: 9.261

Review 5.  Expanding the repertoire of deadenylases.

Authors:  Ilias Skeparnias; Dimitrios Αnastasakis; Athanasios-Nasir Shaukat; Katerina Grafanaki; Constantinos Stathopoulos
Journal:  RNA Biol       Date:  2017-03-07       Impact factor: 4.652

6.  Identify gene expression pattern change at transcriptional and post-transcriptional levels.

Authors:  Ji-Gang Zhang; Chao Xu; Lan Zhang; Wei Zhu; Hui Shen; Hong-Wen Deng
Journal:  Transcription       Date:  2019-02-05

7.  Cleavage factor 25 deregulation contributes to pulmonary fibrosis through alternative polyadenylation.

Authors:  Tingting Weng; Junsuk Ko; Chioniso P Masamha; Zheng Xia; Yu Xiang; Ning-Yuan Chen; Jose G Molina; Scott Collum; Tinne C Mertens; Fayong Luo; Kemly Philip; Jonathan Davies; Jingjing Huang; Cory Wilson; Rajarajan A Thandavarayan; Brian A Bruckner; Soma Sk Jyothula; Kelly A Volcik; Lei Li; Leng Han; Wei Li; Shervin Assassi; Harry Karmouty-Quintana; Eric J Wagner; Michael R Blackburn
Journal:  J Clin Invest       Date:  2019-02-28       Impact factor: 14.808

Review 8.  Poly(A) RNA-binding proteins and polyadenosine RNA: new members and novel functions.

Authors:  Callie P Wigington; Kathryn R Williams; Michael P Meers; Gary J Bassell; Anita H Corbett
Journal:  Wiley Interdiscip Rev RNA       Date:  2014-04-30       Impact factor: 9.957

9.  High-resolution melting-based TILLING of γ ray-induced mutations in rice.

Authors:  Shan Li; Song-Mei Liu; Hao-Wei Fu; Jian-Zhong Huang; Qing-Yao Shu
Journal:  J Zhejiang Univ Sci B       Date:  2018 Aug.       Impact factor: 3.066

10.  Widespread Effects of Chemokine 3' Untranslated Regions on mRNA Degradation and Protein Production in Human Cells.

Authors:  Wenxue Zhao; David J Erle
Journal:  J Immunol       Date:  2018-06-15       Impact factor: 5.422

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