Literature DB >> 22614383

Engineering methylaspartate ammonia lyase for the asymmetric synthesis of unnatural amino acids.

Hans Raj1, Wiktor Szymański, Jandré de Villiers, Henriëtte J Rozeboom, Vinod Puthan Veetil, Carlos R Reis, Marianne de Villiers, Frank J Dekker, Stefaan de Wildeman, Wim J Quax, Andy-Mark W H Thunnissen, Ben L Feringa, Dick B Janssen, Gerrit J Poelarends.   

Abstract

The redesign of enzymes to produce catalysts for a predefined transformation remains a major challenge in protein engineering. Here, we describe the structure-based engineering of methylaspartate ammonia lyase (which in nature catalyses the conversion of 3-methylaspartate to ammonia and 2-methylfumarate) to accept a variety of substituted amines and fumarates and catalyse the asymmetric synthesis of aspartic acid derivatives. We obtained two single-active-site mutants, one exhibiting a wide nucleophile scope including structurally diverse linear and cyclic alkylamines and one with broad electrophile scope including fumarate derivatives with alkyl, aryl, alkoxy, aryloxy, alkylthio and arylthio substituents at the C2 position. Both mutants have an enlarged active site that accommodates the new substrates while retaining the high stereo- and regioselectivity of the wild-type enzyme. As an example, we demonstrate a highly enantio- and diastereoselective synthesis of threo-3-benzyloxyaspartate (an important inhibitor of neuronal excitatory glutamate transporters in the brain).

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Year:  2012        PMID: 22614383     DOI: 10.1038/nchem.1338

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  28 in total

1.  THE MECHANISM OF THE METHYLASPARTATE AMMONIA-LYASE REACTION: DEUTERIUM EXCHANGE.

Authors:  H J BRIGHT; L L INGRAHAM; R E LUNDIN
Journal:  Biochim Biophys Acta       Date:  1964-03-09

2.  The purification and properties of beta-methylaspartase.

Authors:  H A BARKER; R D SMYTH; R M WILSON; H WEISSBACH
Journal:  J Biol Chem       Date:  1959-02       Impact factor: 5.157

Review 3.  The excitatory amino acid transporters: pharmacological insights on substrate and inhibitor specificity of the EAAT subtypes.

Authors:  Richard J Bridges; C Sean Esslinger
Journal:  Pharmacol Ther       Date:  2005-04-14       Impact factor: 12.310

4.  The structure of 3-methylaspartase from Clostridium tetanomorphum functions via the common enolase chemical step.

Authors:  Miryam Asuncion; Wulf Blankenfeldt; John N Barlow; David Gani; James H Naismith
Journal:  J Biol Chem       Date:  2001-12-17       Impact factor: 5.157

5.  Insights into enzyme evolution revealed by the structure of methylaspartate ammonia lyase.

Authors:  C W Levy; P A Buckley; S Sedelnikova; Y Kato; Y Asano; D W Rice; P J Baker
Journal:  Structure       Date:  2002-01       Impact factor: 5.006

Review 6.  Ammonia lyases and aminomutases as biocatalysts for the synthesis of α-amino and β-amino acids.

Authors:  Nicholas J Turner
Journal:  Curr Opin Chem Biol       Date:  2010-12-03       Impact factor: 8.822

7.  The enolase superfamily: a general strategy for enzyme-catalyzed abstraction of the alpha-protons of carboxylic acids.

Authors:  P C Babbitt; M S Hasson; J E Wedekind; D R Palmer; W C Barrett; G H Reed; I Rayment; D Ringe; G L Kenyon; J A Gerlt
Journal:  Biochemistry       Date:  1996-12-24       Impact factor: 3.162

8.  Synthesis of orthogonally protected L-threo-beta-ethoxyasparagine.

Authors:  Jan Spengler; Marta Pelay; Judit Tulla-Puche; Fernando Albericio
Journal:  Amino Acids       Date:  2009-11-17       Impact factor: 3.520

9.  Alteration of the diastereoselectivity of 3-methylaspartate ammonia lyase by using structure-based mutagenesis.

Authors:  Hans Raj; Barbara Weiner; Vinod Puthan Veetil; Carlos R Reis; Wim J Quax; Dick B Janssen; Ben L Feringa; Gerrit J Poelarends
Journal:  Chembiochem       Date:  2009-09-04       Impact factor: 3.164

10.  Synthesis and preliminary pharmacological evaluation of novel derivatives of L-beta-threo-benzylaspartate as inhibitors of the neuronal glutamate transporter EAAT3.

Authors:  Terri L Mavencamp; Joseph F Rhoderick; Richard J Bridges; C Sean Esslinger
Journal:  Bioorg Med Chem       Date:  2008-07-08       Impact factor: 3.641

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  15 in total

1.  Divergent synthesis of biologically active L-threo-β-hydroxyaspartates from common trans-oxazolidine dicarboxylate.

Authors:  Yoonjae Lee; Youngran Seo; Boram Lee; Hyuenyoung Kwon; Kyungsu Chung; Young Gyu Kim
Journal:  Amino Acids       Date:  2022-08-13       Impact factor: 3.789

2.  Asymmetric Preparation of prim-, sec-, and tert-Amines Employing Selected Biocatalysts.

Authors:  Wolfgang Kroutil; Eva-Maria Fischereder; Christine S Fuchs; Horst Lechner; Francesco G Mutti; Desiree Pressnitz; Aashrita Rajagopalan; Johann H Sattler; Robert C Simon; Elina Siirola
Journal:  Org Process Res Dev       Date:  2013-04-22       Impact factor: 3.317

3.  Stereoselective Synthesis of β-Branched Aromatic α-Amino Acids by Biocatalytic Dynamic Kinetic Resolution*.

Authors:  Fuzhuo Li; Li-Cheng Yang; Jingyang Zhang; Jason S Chen; Hans Renata
Journal:  Angew Chem Int Ed Engl       Date:  2021-07-01       Impact factor: 16.823

4.  Crystal Structure of a Hidden Protein, YcaC, a Putative Cysteine Hydrolase from Pseudomonas aeruginosa, with and without an Acrylamide Adduct.

Authors:  Morten K Grøftehauge; Daphne Truan; Adriana Vasil; Paul W Denny; Michael L Vasil; Ehmke Pohl
Journal:  Int J Mol Sci       Date:  2015-07-14       Impact factor: 5.923

5.  The roles of active site residues in the catalytic mechanism of methylaspartate ammonia-lyase.

Authors:  Hans Raj; Gerrit J Poelarends
Journal:  FEBS Open Bio       Date:  2013-07-08       Impact factor: 2.693

6.  Mechanism-based site-directed mutagenesis to shift the optimum pH of the phenylalanine ammonia-lyase from Rhodotorula glutinis JN-1.

Authors:  Longbao Zhu; Li Zhou; Wenjing Cui; Zhongmei Liu; Zhemin Zhou
Journal:  Biotechnol Rep (Amst)       Date:  2014-06-06

7.  Structure-function investigation of 3-methylaspartate ammonia lyase reveals substrate molecular determinants for the deamination reaction.

Authors:  Veronica Saez-Jimenez; Željka Sanader Maršić; Matteo Lambrughi; Jae Ho Shin; Robin van Havere; Elena Papaleo; Lisbeth Olsson; Valeria Mapelli
Journal:  PLoS One       Date:  2020-05-21       Impact factor: 3.240

8.  Chemoenzymatic Synthesis of ortho-, meta-, and para-Substituted Derivatives of l-threo-3-Benzyloxyaspartate, An Important Glutamate Transporter Blocker.

Authors:  Jandré de Villiers; Marianne de Villiers; Edzard M Geertsema; Hans Raj; Gerrit J Poelarends
Journal:  ChemCatChem       Date:  2015-06-16       Impact factor: 5.686

9.  Structural Basis for the Catalytic Mechanism of Ethylenediamine- N, N'-disuccinic Acid Lyase, a Carbon-Nitrogen Bond-Forming Enzyme with a Broad Substrate Scope.

Authors:  Harshwardhan Poddar; Jandré de Villiers; Jielin Zhang; Vinod Puthan Veetil; Hans Raj; Andy-Mark W H Thunnissen; Gerrit J Poelarends
Journal:  Biochemistry       Date:  2018-05-18       Impact factor: 3.162

10.  Chemoenzymatic Synthesis and Pharmacological Characterization of Functionalized Aspartate Analogues As Novel Excitatory Amino Acid Transporter Inhibitors.

Authors:  Haigen Fu; Jielin Zhang; Pieter G Tepper; Lennart Bunch; Anders A Jensen; Gerrit J Poelarends
Journal:  J Med Chem       Date:  2018-08-15       Impact factor: 7.446

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