Literature DB >> 22608723

Distinguishing xyloglucanase activity in endo-β(1→4)glucanases.

Jens M Eklöf1, Marcus C Ruda, Harry Brumer.   

Abstract

The ability of β-glucanases to cleave xyloglucans, a family of highly decorated β-glucans ubiquitous in plant biomass, has traditionally been overlooked in functional biochemical studies. An emerging body of data indicates, however, that a spectrum of xyloglucan specificity resides in diverse glycoside hydrolases from a range of carbohydrate-active enzyme families-including classic "cellulase" families. This chapter outlines a series of enzyme kinetic and product analysis methods to establish degrees of xyloglucan specificity and modes of action of glycosidases emerging from enzyme discovery projects.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22608723     DOI: 10.1016/B978-0-12-415931-0.00006-9

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  15 in total

1.  Characterization of all family-9 glycoside hydrolases synthesized by the cellulosome-producing bacterium Clostridium cellulolyticum.

Authors:  Julie Ravachol; Romain Borne; Chantal Tardif; Pascale de Philip; Henri-Pierre Fierobe
Journal:  J Biol Chem       Date:  2014-01-22       Impact factor: 5.157

2.  Substrate specificity, regiospecificity, and processivity in glycoside hydrolase family 74.

Authors:  Gregory Arnal; Peter J Stogios; Jathavan Asohan; Mohamed A Attia; Tatiana Skarina; Alexander Holm Viborg; Bernard Henrissat; Alexei Savchenko; Harry Brumer
Journal:  J Biol Chem       Date:  2019-07-19       Impact factor: 5.157

3.  Identification of the Gene Encoding Isoprimeverose-producing Oligoxyloglucan Hydrolase in Aspergillus oryzae.

Authors:  Tomohiko Matsuzawa; Yasushi Mitsuishi; Akihiko Kameyama; Katsuro Yaoi
Journal:  J Biol Chem       Date:  2016-01-11       Impact factor: 5.157

4.  Crystallographic insight into the evolutionary origins of xyloglucan endotransglycosylases and endohydrolases.

Authors:  Nicholas McGregor; Victor Yin; Ching-Chieh Tung; Filip Van Petegem; Harry Brumer
Journal:  Plant J       Date:  2017-02-11       Impact factor: 6.417

Review 5.  Cell Surface Xyloglucan Recognition and Hydrolysis by the Human Gut Commensal Bacteroides uniformis.

Authors:  Julie M Grondin; Guillaume Déjean; Filip Van Petegem; Harry Brumer
Journal:  Appl Environ Microbiol       Date:  2021-11-03       Impact factor: 5.005

6.  Structure-Function Analysis of a Mixed-linkage β-Glucanase/Xyloglucanase from the Key Ruminal Bacteroidetes Prevotella bryantii B(1)4.

Authors:  Nicholas McGregor; Mariya Morar; Thomas Hauch Fenger; Peter Stogios; Nicolas Lenfant; Victor Yin; Xiaohui Xu; Elena Evdokimova; Hong Cui; Bernard Henrissat; Alexei Savchenko; Harry Brumer
Journal:  J Biol Chem       Date:  2015-10-27       Impact factor: 5.157

7.  Characterization of an endo-processive-type xyloglucanase having a β-1,4-glucan-binding module and an endo-type xyloglucanase from Streptomyces avermitilis.

Authors:  Hitomi Ichinose; Yuko Araki; Mari Michikawa; Koichi Harazono; Katsuro Yaoi; Shuichi Karita; Satoshi Kaneko
Journal:  Appl Environ Microbiol       Date:  2012-08-31       Impact factor: 4.792

8.  Structure-function analysis of a broad specificity Populus trichocarpa endo-β-glucanase reveals an evolutionary link between bacterial licheninases and plant XTH gene products.

Authors:  Jens M Eklöf; Shaheen Shojania; Mark Okon; Lawrence P McIntosh; Harry Brumer
Journal:  J Biol Chem       Date:  2013-04-09       Impact factor: 5.157

9.  A Cell-Surface GH9 Endo-Glucanase Coordinates with Surface Glycan-Binding Proteins to Mediate Xyloglucan Uptake in the Gut Symbiont Bacteroides ovatus.

Authors:  Matthew H Foley; Guillaume Déjean; Glyn R Hemsworth; Gideon J Davies; Harry Brumer; Nicole M Koropatkin
Journal:  J Mol Biol       Date:  2019-01-19       Impact factor: 5.469

10.  Use of Nanostructure-Initiator Mass Spectrometry to Deduce Selectivity of Reaction in Glycoside Hydrolases.

Authors:  Kai Deng; Taichi E Takasuka; Christopher M Bianchetti; Lai F Bergeman; Paul D Adams; Trent R Northen; Brian G Fox
Journal:  Front Bioeng Biotechnol       Date:  2015-10-27
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