Literature DB >> 22606117

4,4'-Bipyrid-yl-4,4'-(hy-droxy-methyl-ene)dibenzoic acid (1/1).

Lan Qin1, Lan-Ping Xu, Lei Han.   

Abstract

In the title 1:1 co-crystal, C(10)H(8)N(2C(15)H(12)O(5), strong inter-molecular O-H⋯N hydrogen bonds link alternating mol-ecules of 4,4'-(hy-droxy-methyl-ene)dibenzoic acid and 4,4'-bipyridyl into zigzag chains in [501]. The crystal packing also exhibits π-π inter-actions between the 4,4'-bipyridyl rings of neighbouring chains [centroid-centroid distance = 3.608 (3) Å] and weak C-H⋯O hydrogen bonds.

Entities:  

Year:  2012        PMID: 22606117      PMCID: PMC3344114          DOI: 10.1107/S1600536812011956

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to supra­molecular crystal engineering, see: Simon & Bassoul (2000 ▶). For aromatic carb­oxy­lic acids as supra­molecular synthons, see: Desiraju (1995 ▶). For studies of bent arenedicarboxyl­ate ligands, see: Koichi et al. (2011 ▶); Xu et al. (2011 ▶).

Experimental

Crystal data

C10H8N2·C15H12O5 M = 428.43 Monoclinic, a = 8.0528 (16) Å b = 11.683 (2) Å c = 21.922 (4) Å β = 96.66 (3)° V = 2048.6 (7) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 298 K 0.31 × 0.14 × 0.12 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.984, T max = 0.988 16322 measured reflections 3800 independent reflections 1903 reflections with I > 2σ(I) R int = 0.089

Refinement

R[F 2 > 2σ(F 2)] = 0.077 wR(F 2) = 0.210 S = 0.99 3800 reflections 298 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.68 e Å−3 Δρmin = −0.28 e Å−3 Data collection: RAPID-AUTO (Rigaku, 1998 ▶); cell refinement: RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812011956/cv5265sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812011956/cv5265Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812011956/cv5265Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H8N2·C15H12O5F(000) = 896
Mr = 428.43Dx = 1.389 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 2687 reflections
a = 8.0528 (16) Åθ = 3.1–25.5°
b = 11.683 (2) ŵ = 0.10 mm1
c = 21.922 (4) ÅT = 298 K
β = 96.66 (3)°Block, colourless
V = 2048.6 (7) Å30.31 × 0.14 × 0.12 mm
Z = 4
Rigaku R-AXIS RAPID diffractometer3800 independent reflections
Radiation source: fine-focus sealed tube1903 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.089
Detector resolution: 0 pixels mm-1θmax = 25.5°, θmin = 3.1°
ω scansh = −9→9
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)k = −14→14
Tmin = 0.984, Tmax = 0.988l = −26→24
16322 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.077H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.210w = 1/[σ2(Fo2) + (0.0824P)2 + 1.4919P] where P = (Fo2 + 2Fc2)/3
S = 0.99(Δ/σ)max < 0.001
3800 reflectionsΔρmax = 0.68 e Å3
298 parametersΔρmin = −0.28 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0067 (18)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O11.7007 (4)−0.0589 (3)0.44854 (15)0.0828 (10)
O21.8293 (4)−0.0048 (3)0.36999 (15)0.0844 (11)
O30.6425 (4)−0.0831 (3)0.12982 (16)0.0831 (10)
O40.5017 (4)0.0793 (3)0.11948 (17)0.0863 (12)
O51.1910 (4)0.3660 (3)0.2676 (2)0.1155 (15)
H5A1.10980.40450.25420.173*
N1−0.2656 (4)0.0472 (3)−0.06295 (16)0.0628 (10)
N20.4192 (4)0.3635 (3)0.08219 (19)0.0694 (10)
C11.7018 (5)−0.0067 (4)0.4015 (2)0.0610 (11)
C21.5595 (5)0.0650 (4)0.37421 (18)0.0557 (11)
C31.5610 (5)0.1201 (4)0.31932 (19)0.0686 (13)
H3A1.65460.11390.29840.082*
C41.4188 (5)0.0754 (4)0.40432 (19)0.0633 (12)
H4A1.41420.03850.44170.076*
C51.4258 (5)0.1850 (5)0.2941 (2)0.0780 (15)
H5B1.43020.22200.25680.094*
C61.2844 (5)0.1406 (4)0.3790 (2)0.0668 (12)
H6A1.19080.14750.39990.080*
C71.2865 (5)0.1952 (4)0.3238 (2)0.0653 (12)
C81.1347 (5)0.2650 (4)0.2987 (2)0.0784 (15)
H8A1.07680.29040.33320.094*
C91.0110 (4)0.1983 (4)0.25372 (18)0.0586 (11)
C101.0175 (5)0.0821 (4)0.24747 (19)0.0660 (12)
H10A1.10540.04150.26860.079*
C110.8944 (5)0.0235 (4)0.20995 (19)0.0613 (11)
H11A0.9000−0.05570.20640.074*
C120.7646 (4)0.0829 (4)0.17821 (17)0.0526 (10)
C130.7589 (5)0.1998 (4)0.18338 (18)0.0608 (11)
H13A0.67230.24040.16140.073*
C140.8806 (5)0.2575 (4)0.22089 (19)0.0618 (11)
H14A0.87520.33680.22420.074*
C150.6312 (5)0.0179 (4)0.1404 (2)0.0616 (11)
C16−0.2813 (5)0.1129 (4)−0.0146 (2)0.0671 (12)
H16A−0.38490.11540.00030.081*
C17−0.1537 (5)0.1778 (4)0.01501 (19)0.0594 (11)
H17A−0.17120.22200.04890.071*
C180.0024 (4)0.1760 (3)−0.00674 (18)0.0515 (10)
C190.0182 (5)0.1095 (3)−0.05812 (18)0.0578 (11)
H19A0.11910.1070−0.07480.069*
C20−0.1179 (5)0.0466 (4)−0.0844 (2)0.0641 (12)
H20A−0.10510.0020−0.11870.077*
C210.1463 (5)0.2406 (3)0.02397 (18)0.0526 (10)
C220.1556 (5)0.2692 (4)0.0859 (2)0.0649 (12)
H22A0.07110.24780.10910.078*
C230.2930 (5)0.3303 (4)0.1123 (2)0.0725 (13)
H23A0.29730.34920.15360.087*
C240.4097 (5)0.3339 (4)0.0235 (2)0.0679 (13)
H24A0.49700.35550.00170.082*
C250.2790 (5)0.2731 (4)−0.0073 (2)0.0631 (12)
H25A0.27980.2542−0.04840.076*
H21.915 (6)−0.042 (5)0.385 (2)0.100 (19)*
H10.436 (7)0.031 (5)0.099 (2)0.11 (2)*
U11U22U33U12U13U23
O10.084 (2)0.091 (3)0.071 (2)0.0073 (18)0.0029 (17)0.0258 (19)
O20.061 (2)0.109 (3)0.082 (2)0.023 (2)0.0036 (18)0.026 (2)
O30.0630 (19)0.078 (3)0.105 (3)−0.0035 (17)−0.0046 (17)−0.008 (2)
O40.062 (2)0.083 (3)0.106 (3)0.0024 (18)−0.0254 (19)−0.017 (2)
O50.089 (3)0.090 (3)0.156 (4)−0.001 (2)−0.033 (2)0.012 (3)
N10.053 (2)0.064 (2)0.068 (2)0.0002 (17)−0.0067 (18)−0.0012 (19)
N20.054 (2)0.068 (3)0.083 (3)−0.0012 (18)−0.007 (2)−0.005 (2)
C10.057 (3)0.068 (3)0.057 (3)−0.005 (2)−0.002 (2)−0.001 (2)
C20.051 (2)0.064 (3)0.051 (2)−0.0029 (19)0.0005 (19)0.000 (2)
C30.053 (2)0.095 (4)0.058 (3)0.014 (2)0.009 (2)0.012 (3)
C40.066 (3)0.073 (3)0.050 (2)−0.013 (2)0.007 (2)−0.004 (2)
C50.064 (3)0.109 (4)0.060 (3)0.015 (3)0.002 (2)0.015 (3)
C60.047 (2)0.085 (3)0.070 (3)−0.001 (2)0.010 (2)−0.020 (3)
C70.052 (2)0.079 (3)0.063 (3)0.002 (2)−0.007 (2)−0.015 (2)
C80.063 (3)0.074 (4)0.094 (4)0.007 (2)−0.011 (3)−0.014 (3)
C90.045 (2)0.071 (3)0.059 (2)0.002 (2)0.0015 (19)−0.012 (2)
C100.051 (2)0.077 (3)0.065 (3)0.010 (2)−0.011 (2)−0.007 (2)
C110.058 (2)0.059 (3)0.064 (3)0.005 (2)0.000 (2)−0.002 (2)
C120.044 (2)0.064 (3)0.049 (2)−0.0003 (19)0.0033 (17)0.001 (2)
C130.048 (2)0.074 (3)0.058 (2)0.006 (2)−0.0040 (19)0.000 (2)
C140.056 (2)0.061 (3)0.066 (3)0.003 (2)−0.001 (2)−0.003 (2)
C150.055 (3)0.064 (3)0.065 (3)0.001 (2)0.001 (2)−0.001 (2)
C160.047 (2)0.068 (3)0.086 (3)0.001 (2)0.005 (2)−0.002 (3)
C170.054 (2)0.061 (3)0.062 (3)0.003 (2)0.001 (2)−0.002 (2)
C180.048 (2)0.051 (3)0.053 (2)0.0009 (18)−0.0034 (18)0.005 (2)
C190.053 (2)0.059 (3)0.059 (3)0.003 (2)−0.001 (2)0.002 (2)
C200.063 (3)0.066 (3)0.060 (3)0.003 (2)−0.005 (2)−0.003 (2)
C210.049 (2)0.051 (3)0.055 (2)0.0005 (18)−0.0044 (19)0.0004 (19)
C220.056 (2)0.065 (3)0.071 (3)0.000 (2)−0.006 (2)−0.004 (2)
C230.066 (3)0.076 (3)0.071 (3)0.006 (2)−0.012 (2)−0.009 (3)
C240.052 (2)0.070 (3)0.080 (3)−0.003 (2)−0.002 (2)0.004 (3)
C250.057 (2)0.069 (3)0.062 (3)−0.003 (2)0.000 (2)0.003 (2)
O1—C11.199 (5)C9—C141.387 (5)
O2—C11.302 (5)C10—C111.392 (5)
O2—H20.84 (5)C10—H10A0.9300
O3—C151.208 (5)C11—C121.375 (5)
O4—C151.304 (5)C11—H11A0.9300
O4—H10.87 (6)C12—C131.371 (6)
O5—C81.460 (6)C12—C151.487 (6)
O5—H5A0.8200C13—C141.380 (5)
N1—C161.327 (5)C13—H13A0.9300
N1—C201.329 (5)C14—H14A0.9300
N2—C241.325 (6)C16—C171.377 (5)
N2—C231.332 (6)C16—H16A0.9300
C1—C21.488 (6)C17—C181.395 (5)
C2—C31.365 (5)C17—H17A0.9300
C2—C41.381 (6)C18—C191.386 (5)
C3—C51.388 (6)C18—C211.478 (5)
C3—H3A0.9300C19—C201.387 (5)
C4—C61.386 (6)C19—H19A0.9300
C4—H4A0.9300C20—H20A0.9300
C5—C71.365 (6)C21—C251.387 (6)
C5—H5B0.9300C21—C221.391 (5)
C6—C71.370 (6)C22—C231.385 (6)
C6—H6A0.9300C22—H22A0.9300
C7—C81.518 (6)C23—H23A0.9300
C8—C91.531 (6)C24—C251.379 (6)
C8—H8A0.9800C24—H24A0.9300
C9—C101.367 (6)C25—H25A0.9300
C1—O2—H2116 (4)C13—C12—C15121.7 (4)
C15—O4—H1104 (4)C11—C12—C15118.8 (4)
C8—O5—H5A109.5C12—C13—C14120.5 (4)
C16—N1—C20117.2 (4)C12—C13—H13A119.7
C24—N2—C23116.3 (4)C14—C13—H13A119.7
O1—C1—O2123.3 (4)C13—C14—C9120.5 (4)
O1—C1—C2123.3 (4)C13—C14—H14A119.7
O2—C1—C2113.3 (4)C9—C14—H14A119.7
C3—C2—C4118.1 (4)O3—C15—O4123.0 (4)
C3—C2—C1122.3 (4)O3—C15—C12122.7 (4)
C4—C2—C1119.6 (4)O4—C15—C12114.3 (4)
C2—C3—C5121.4 (4)N1—C16—C17124.0 (4)
C2—C3—H3A119.3N1—C16—H16A118.0
C5—C3—H3A119.3C17—C16—H16A118.0
C2—C4—C6120.2 (4)C16—C17—C18118.9 (4)
C2—C4—H4A119.9C16—C17—H17A120.5
C6—C4—H4A119.9C18—C17—H17A120.5
C7—C5—C3120.6 (4)C19—C18—C17117.2 (4)
C7—C5—H5B119.7C19—C18—C21121.0 (4)
C3—C5—H5B119.7C17—C18—C21121.8 (4)
C7—C6—C4121.4 (4)C18—C19—C20119.5 (4)
C7—C6—H6A119.3C18—C19—H19A120.3
C4—C6—H6A119.3C20—C19—H19A120.3
C5—C7—C6118.3 (4)N1—C20—C19123.1 (4)
C5—C7—C8123.1 (5)N1—C20—H20A118.4
C6—C7—C8118.5 (4)C19—C20—H20A118.4
O5—C8—C7108.8 (4)C25—C21—C22117.3 (4)
O5—C8—C9108.9 (4)C25—C21—C18121.6 (4)
C7—C8—C9113.3 (4)C22—C21—C18121.2 (4)
O5—C8—H8A108.6C23—C22—C21118.8 (4)
C7—C8—H8A108.6C23—C22—H22A120.6
C9—C8—H8A108.6C21—C22—H22A120.6
C10—C9—C14118.6 (4)N2—C23—C22124.1 (5)
C10—C9—C8122.7 (4)N2—C23—H23A117.9
C14—C9—C8118.5 (4)C22—C23—H23A117.9
C9—C10—C11121.0 (4)N2—C24—C25124.3 (4)
C9—C10—H10A119.5N2—C24—H24A117.8
C11—C10—H10A119.5C25—C24—H24A117.8
C12—C11—C10119.9 (4)C24—C25—C21119.2 (4)
C12—C11—H11A120.1C24—C25—H25A120.4
C10—C11—H11A120.1C21—C25—H25A120.4
C13—C12—C11119.5 (4)
D—H···AD—HH···AD···AD—H···A
O2—H2···N2i0.84 (5)1.82 (5)2.660 (5)173 (5)
O4—H1···N1ii0.87 (6)1.76 (6)2.605 (5)166 (5)
C19—H19A···O3iii0.932.403.321 (5)171
C17—H17A···O1iv0.932.573.212 (5)126
C8—H8A···O3iv0.982.513.376 (6)148
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2⋯N2i0.84 (5)1.82 (5)2.660 (5)173 (5)
O4—H1⋯N1ii0.87 (6)1.76 (6)2.605 (5)166 (5)
C19—H19A⋯O3iii0.932.403.321 (5)171
C17—H17A⋯O1iv0.932.573.212 (5)126
C8—H8A⋯O3iv0.982.513.376 (6)148

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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