Literature DB >> 22606097

1-(2-Methyl-benz-yl)-1H-indole-3-carbaldehyde.

Yang Wu, Wen Ren, Qiang Wang, Gu He.   

Abstract

In the title compound, C(17)H(15)NO, the benzene ring and the indole system are almost perpendicular, making a dihedral angle of 87.82 (6)°. The crystal packing is stabilized by C-H⋯O and π-π stacking inter-actions with centroid-centroid distances of 3.592 (4) Å between the pyrrole and the benzene rings in the indole systems of neighboring mol-ecules.

Entities:  

Year:  2012        PMID: 22606097      PMCID: PMC3344094          DOI: 10.1107/S1600536812010306

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to the chemistry and anti-inflammatory activity of carboxylic acid derivatives, see: Andreani et al. (1994 ▶).

Experimental

Crystal data

C17H15NO M = 249.30 Monoclinic, a = 10.5251 (3) Å b = 15.4352 (5) Å c = 8.2335 (2) Å β = 99.214 (3)° V = 1320.33 (7) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 293 K 0.28 × 0.25 × 0.20 mm

Data collection

Agilent Xcalibur Eos diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011 ▶) T min = 0.981, T max = 1.000 5468 measured reflections 2699 independent reflections 1928 reflections with I > 2σ(I) R int = 0.016

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.117 S = 1.04 2699 reflections 173 parameters H-atom parameters constrained Δρmax = 0.13 e Å−3 Δρmin = −0.17 e Å−3 Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: OLEX2 (Dolomanov, 2009 ▶); software used to prepare material for publication: OLEX2. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812010306/bt5840sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812010306/bt5840Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812010306/bt5840Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H15NOF(000) = 528
Mr = 249.30Dx = 1.254 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.7107 Å
a = 10.5251 (3) ÅCell parameters from 1937 reflections
b = 15.4352 (5) Åθ = 3.2–29.1°
c = 8.2335 (2) ŵ = 0.08 mm1
β = 99.214 (3)°T = 293 K
V = 1320.33 (7) Å3Block, colorless
Z = 40.28 × 0.25 × 0.20 mm
Agilent Xcalibur Eos diffractometer2699 independent reflections
Radiation source: fine-focus sealed tube1928 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.016
Detector resolution: 16.0874 pixels mm-1θmax = 26.4°, θmin = 3.2°
ω scansh = −11→13
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011)k = −11→19
Tmin = 0.981, Tmax = 1.000l = −10→4
5468 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.117H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0449P)2 + 0.2065P] where P = (Fo2 + 2Fc2)/3
2699 reflections(Δ/σ)max < 0.001
173 parametersΔρmax = 0.13 e Å3
0 restraintsΔρmin = −0.17 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.02058 (15)0.14964 (11)−0.33644 (17)0.0895 (5)
N10.21128 (12)0.01830 (9)0.14071 (15)0.0439 (3)
C10.18887 (13)−0.04418 (11)0.01839 (19)0.0404 (4)
C20.13295 (13)−0.00278 (11)−0.12762 (19)0.0415 (4)
C30.12187 (14)0.08699 (11)−0.0886 (2)0.0457 (4)
C40.17018 (15)0.09542 (11)0.0760 (2)0.0475 (4)
H40.17390.14720.13440.057*
C50.10025 (15)−0.05289 (13)−0.2699 (2)0.0506 (4)
H50.0639−0.0273−0.36870.061*
C60.12281 (16)−0.14068 (13)−0.2611 (2)0.0573 (5)
H60.1010−0.1744−0.35490.069*
C70.17749 (16)−0.17975 (12)−0.1149 (2)0.0567 (5)
H70.1910−0.2393−0.11260.068*
C80.21221 (15)−0.13246 (11)0.0266 (2)0.0503 (4)
H80.2499−0.15870.12420.060*
C90.06793 (18)0.15646 (14)−0.1918 (3)0.0642 (5)
H90.06900.2113−0.14490.077*
C100.26384 (17)0.00142 (12)0.31387 (19)0.0536 (5)
H10A0.3153−0.05100.32100.064*
H10B0.1933−0.00820.37450.064*
C110.34564 (15)0.07493 (11)0.39236 (19)0.0455 (4)
C120.46514 (15)0.09284 (11)0.34816 (19)0.0448 (4)
C130.53745 (17)0.15965 (12)0.4283 (2)0.0565 (5)
H130.61760.17210.40020.068*
C140.4941 (2)0.20792 (14)0.5479 (2)0.0679 (6)
H140.54450.25250.59970.082*
C150.3765 (2)0.19041 (15)0.5909 (3)0.0744 (6)
H150.34670.22280.67220.089*
C160.30237 (18)0.12415 (14)0.5125 (2)0.0637 (5)
H160.22210.11250.54110.076*
C170.51550 (17)0.04237 (15)0.2160 (2)0.0666 (6)
H17A0.5075−0.01850.23600.100*
H17B0.60440.05650.21680.100*
H17C0.46670.05680.11080.100*
U11U22U33U12U13U23
O10.1027 (11)0.1071 (13)0.0562 (9)0.0489 (10)0.0050 (8)0.0189 (9)
N10.0436 (7)0.0468 (8)0.0395 (7)−0.0044 (6)0.0014 (6)0.0004 (7)
C10.0344 (8)0.0448 (10)0.0419 (9)−0.0048 (7)0.0059 (6)−0.0003 (8)
C20.0307 (7)0.0519 (10)0.0418 (9)−0.0009 (7)0.0059 (6)0.0016 (8)
C30.0377 (8)0.0520 (11)0.0471 (9)0.0042 (7)0.0054 (7)0.0049 (8)
C40.0461 (9)0.0446 (10)0.0515 (10)−0.0020 (7)0.0070 (8)−0.0009 (8)
C50.0386 (8)0.0719 (13)0.0404 (9)−0.0027 (8)0.0031 (7)−0.0013 (9)
C60.0509 (10)0.0663 (13)0.0550 (11)−0.0111 (9)0.0098 (8)−0.0169 (10)
C70.0570 (10)0.0472 (11)0.0663 (12)−0.0060 (8)0.0109 (9)−0.0063 (9)
C80.0495 (9)0.0482 (11)0.0523 (10)−0.0042 (8)0.0052 (8)0.0054 (9)
C90.0626 (12)0.0655 (13)0.0659 (13)0.0204 (10)0.0145 (10)0.0106 (11)
C100.0586 (10)0.0626 (12)0.0381 (9)−0.0110 (9)0.0031 (8)0.0043 (8)
C110.0486 (9)0.0514 (10)0.0348 (8)−0.0002 (8)0.0020 (7)0.0014 (8)
C120.0459 (9)0.0520 (10)0.0345 (8)0.0019 (8)0.0004 (7)0.0041 (8)
C130.0511 (10)0.0644 (12)0.0505 (10)−0.0082 (9)−0.0028 (8)0.0026 (10)
C140.0765 (13)0.0592 (13)0.0622 (12)−0.0081 (11)−0.0073 (11)−0.0119 (11)
C150.0856 (15)0.0753 (15)0.0612 (13)0.0110 (12)0.0082 (11)−0.0251 (11)
C160.0579 (11)0.0806 (15)0.0541 (11)0.0017 (10)0.0133 (9)−0.0112 (10)
C170.0572 (11)0.0863 (16)0.0584 (12)0.0029 (10)0.0161 (9)−0.0093 (11)
O1—C91.220 (2)C9—H90.9300
N1—C11.387 (2)C10—H10A0.9700
N1—C41.347 (2)C10—H10B0.9700
N1—C101.4677 (19)C10—C111.506 (2)
C1—C21.405 (2)C11—C121.392 (2)
C1—C81.384 (2)C11—C161.381 (2)
C2—C31.431 (2)C12—C131.385 (2)
C2—C51.400 (2)C12—C171.502 (2)
C3—C41.375 (2)C13—H130.9300
C3—C91.428 (2)C13—C141.370 (3)
C4—H40.9300C14—H140.9300
C5—H50.9300C14—C151.367 (3)
C5—C61.376 (3)C15—H150.9300
C6—H60.9300C15—C161.382 (3)
C6—C71.386 (3)C16—H160.9300
C7—H70.9300C17—H17A0.9600
C7—C81.374 (2)C17—H17B0.9600
C8—H80.9300C17—H17C0.9600
C1—N1—C10125.15 (14)N1—C10—H10A109.1
C4—N1—C1108.69 (13)N1—C10—H10B109.1
C4—N1—C10126.06 (14)N1—C10—C11112.57 (14)
N1—C1—C2107.72 (14)H10A—C10—H10B107.8
C8—C1—N1129.84 (15)C11—C10—H10A109.1
C8—C1—C2122.44 (15)C11—C10—H10B109.1
C1—C2—C3106.65 (14)C12—C11—C10121.05 (15)
C5—C2—C1118.56 (16)C16—C11—C10119.37 (16)
C5—C2—C3134.79 (16)C16—C11—C12119.57 (16)
C4—C3—C2106.38 (14)C11—C12—C17121.66 (15)
C4—C3—C9124.34 (17)C13—C12—C11118.30 (15)
C9—C3—C2129.24 (16)C13—C12—C17120.04 (16)
N1—C4—C3110.55 (15)C12—C13—H13119.1
N1—C4—H4124.7C14—C13—C12121.77 (17)
C3—C4—H4124.7C14—C13—H13119.1
C2—C5—H5120.6C13—C14—H14120.1
C6—C5—C2118.87 (16)C15—C14—C13119.88 (18)
C6—C5—H5120.6C15—C14—H14120.1
C5—C6—H6119.4C14—C15—H15120.3
C5—C6—C7121.23 (17)C14—C15—C16119.49 (18)
C7—C6—H6119.4C16—C15—H15120.3
C6—C7—H7119.3C11—C16—C15121.00 (18)
C8—C7—C6121.48 (18)C11—C16—H16119.5
C8—C7—H7119.3C15—C16—H16119.5
C1—C8—H8121.3C12—C17—H17A109.5
C7—C8—C1117.41 (16)C12—C17—H17B109.5
C7—C8—H8121.3C12—C17—H17C109.5
O1—C9—C3125.3 (2)H17A—C17—H17B109.5
O1—C9—H9117.4H17A—C17—H17C109.5
C3—C9—H9117.4H17B—C17—H17C109.5
N1—C1—C2—C3−0.28 (16)C5—C2—C3—C91.2 (3)
N1—C1—C2—C5−179.55 (13)C5—C6—C7—C8−0.5 (3)
N1—C1—C8—C7178.63 (15)C6—C7—C8—C10.9 (2)
N1—C10—C11—C12−69.9 (2)C8—C1—C2—C3179.02 (14)
N1—C10—C11—C16111.41 (18)C8—C1—C2—C5−0.3 (2)
C1—N1—C4—C3−0.86 (18)C9—C3—C4—N1178.46 (15)
C1—N1—C10—C11147.04 (15)C10—N1—C1—C2177.28 (13)
C1—C2—C3—C4−0.23 (16)C10—N1—C1—C8−1.9 (2)
C1—C2—C3—C9−177.87 (16)C10—N1—C4—C3−177.41 (13)
C1—C2—C5—C60.6 (2)C10—C11—C12—C13−178.10 (15)
C2—C1—C8—C7−0.5 (2)C10—C11—C12—C172.5 (2)
C2—C3—C4—N10.67 (17)C10—C11—C16—C15178.00 (18)
C2—C3—C9—O10.0 (3)C11—C12—C13—C14−0.3 (3)
C2—C5—C6—C7−0.3 (2)C12—C11—C16—C15−0.7 (3)
C3—C2—C5—C6−178.37 (16)C12—C13—C14—C150.1 (3)
C4—N1—C1—C20.69 (16)C13—C14—C15—C16−0.2 (3)
C4—N1—C1—C8−178.54 (15)C14—C15—C16—C110.5 (3)
C4—N1—C10—C11−37.0 (2)C16—C11—C12—C130.5 (2)
C4—C3—C9—O1−177.28 (17)C16—C11—C12—C17−178.81 (16)
C5—C2—C3—C4178.87 (16)C17—C12—C13—C14179.10 (17)
D—H···AD—HH···AD···AD—H···A
C16—H16···O1i0.932.563.418 (2)154
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C16—H16⋯O1i0.932.563.418 (2)154

Symmetry code: (i) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  1 in total

1.  1-[6-(1H-Indol-1-yl)pyridin-2-yl]-1H-indole-3-carbaldehyde.

Authors:  C Ramathilagam; P R Umarani; N Venkatesan; P Rajakumar; B Gunasekaran; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-01-04
  1 in total

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