Literature DB >> 2259631

Structure and function of the enhancer 3' to the human A gamma globin gene.

M Purucker1, D Bodine, H Lin, K McDonagh, A W Nienhuis.   

Abstract

An enhancer is located immediately 3' to the A gamma globin gene. We have used DNase I footprinting to map the sites of interaction of nuclear proteins with the DNA sequences of this enhancer. Eight footprints were discovered, distributed over 600 base pairs of DNA. Three of these contain a consensus binding site for the erythroid specific factor GATA-I. Each of these GATA-1 sites had an enhancer activity when inserted into a reporter plasmid and tested in human erythroleukemia cells. Other footprints within the enhancer contained consensus binding sequences for the ubiquitous, positive regulatory proteins AP2 and CBP-1. An Sp1-like recognition sequence was also identified. Synthetic oligonucleotides encompassing two of the footprints generated a slowly migrating complex in gel mobility shift assays. The same complex forms on a fragment of the human gamma globin gene promoter extending from -260 to -200. The DNaseI footprint of this protein complex with the enhancer overlapped a sequence, AGGAGGA, found within the binding site for a protein that interacts with the chicken beta globin promoter and enhancer, termed the stage selector element. We propose that this complex of proteins may be involved in the human gamma globin promoter-enhancer interaction.

Entities:  

Mesh:

Substances:

Year:  1990        PMID: 2259631      PMCID: PMC332879          DOI: 10.1093/nar/18.24.7407

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  57 in total

1.  Tandem AP-1-binding sites within the human beta-globin dominant control region function as an inducible enhancer in erythroid cells.

Authors:  P A Ney; B P Sorrentino; K T McDonagh; A W Nienhuis
Journal:  Genes Dev       Date:  1990-06       Impact factor: 11.361

2.  DNA sequence analysis by primed synthesis.

Authors:  A J Smith
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

3.  Identification of DNA sequences required for transcription of the human alpha 1-globin gene in a new SV40 host-vector system.

Authors:  P Mellon; V Parker; Y Gluzman; T Maniatis
Journal:  Cell       Date:  1981-12       Impact factor: 41.582

4.  The SV40 72 base repair repeat has a striking effect on gene expression both in SV40 and other chimeric recombinants.

Authors:  P Moreau; R Hen; B Wasylyk; R Everett; M P Gaub; P Chambon
Journal:  Nucleic Acids Res       Date:  1981-11-25       Impact factor: 16.971

5.  Three regions upstream from the cap site are required for efficient and accurate transcription of the rabbit beta-globin gene in mouse 3T6 cells.

Authors:  P Dierks; A van Ooyen; M D Cochran; C Dobkin; J Reiser; C Weissmann
Journal:  Cell       Date:  1983-03       Impact factor: 41.582

6.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

7.  Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.

Authors:  C Yanisch-Perron; J Vieira; J Messing
Journal:  Gene       Date:  1985       Impact factor: 3.688

8.  Enhancer-dependent expression of human kappa immunoglobulin genes introduced into mouse pre-B lymphocytes by electroporation.

Authors:  H Potter; L Weir; P Leder
Journal:  Proc Natl Acad Sci U S A       Date:  1984-11       Impact factor: 11.205

9.  Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei.

Authors:  J D Dignam; R M Lebovitz; R G Roeder
Journal:  Nucleic Acids Res       Date:  1983-03-11       Impact factor: 16.971

10.  The -117 mutation in Greek HPFH affects the binding of three nuclear factors to the CCAAT region of the gamma-globin gene.

Authors:  G Superti-Furga; A Barberis; G Schaffner; M Busslinger
Journal:  EMBO J       Date:  1988-10       Impact factor: 11.598

View more
  16 in total

1.  Silencing of Agamma-globin gene expression during adult definitive erythropoiesis mediated by GATA-1-FOG-1-Mi2 complex binding at the -566 GATA site.

Authors:  Susanna Harju-Baker; Flávia C Costa; Halyna Fedosyuk; Renee Neades; Kenneth R Peterson
Journal:  Mol Cell Biol       Date:  2008-03-17       Impact factor: 4.272

2.  A homeodomain protein binds to gamma-globin gene regulatory sequences.

Authors:  D Lavelle; J Ducksworth; E Eves; G Gomes; M Keller; P Heller; J DeSimone
Journal:  Proc Natl Acad Sci U S A       Date:  1991-08-15       Impact factor: 11.205

3.  In situ footprinting of chicken histone H5 gene in mature and immature erythrocytes reveals common factor-binding sites.

Authors:  J M Sun; R Ferraiuolo; J R Davie
Journal:  Chromosoma       Date:  1996-04       Impact factor: 4.316

Review 4.  Tissue specific and vitamin D responsive gene expression in bone.

Authors:  C White; E Gardiner; J Eisman
Journal:  Mol Biol Rep       Date:  1998-01       Impact factor: 2.316

5.  Identification of long-range regulatory elements in the protocadherin-alpha gene cluster.

Authors:  Scott Ribich; Bosiljka Tasic; Tom Maniatis
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-15       Impact factor: 11.205

6.  Human G gamma and A gamma globin gene constructs containing the 3' A gamma enhancer show persistent fetal expression in transgenic mice.

Authors:  M P Harvey; J Crosbie; R J Trent
Journal:  Transgenic Res       Date:  1993-03       Impact factor: 2.788

7.  Human gamma- to beta-globin gene switching using a mini construct in transgenic mice.

Authors:  J A Lloyd; J M Krakowsky; S C Crable; J B Lingrel
Journal:  Mol Cell Biol       Date:  1992-04       Impact factor: 4.272

8.  A haplotype-linked four base pair deletion upstream of the A gamma globin gene coincides with decreased gene expression.

Authors:  C Beldjord; R Ducrocq; S Nadifi; C Lapoumeroulie; J Elion; D Labie
Journal:  Hum Genet       Date:  1992-08       Impact factor: 4.132

Review 9.  Diet and the epigenetic (re)programming of phenotypic differences in behavior.

Authors:  Patrick O McGowan; Michael J Meaney; Moshe Szyf
Journal:  Brain Res       Date:  2008-07-29       Impact factor: 3.252

10.  Persistent fetal gamma-globin expression in adult transgenic mice following deletion of two silencer elements located 3' to the human Agamma-globin gene.

Authors:  Maria Gazouli; Eleni Katsantoni; Theodoros Kosteas; Nicholas P Anagnou
Journal:  Mol Med       Date:  2009-08-10       Impact factor: 6.354

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.