Literature DB >> 22594688

Development of an influenza virus protein array using Sortagging technology.

Antonia Sinisi1, Maximilian Wei-Lin Popp, John M Antos, Werner Pansegrau, Silvana Savino, Mikkel Nissum, Rino Rappuoli, Hidde L Ploegh, Ludovico Buti.   

Abstract

Protein array technology is an emerging tool that enables high-throughput screening of protein-protein or protein-lipid interactions and identification of immunodominant antigens during the course of a bacterial or viral infection. In this work, we developed an Influenza virus protein array using the sortase-mediated transpeptidation reaction known as "Sortagging". LPETG-tagged Influenza virus proteins from bacterial and eukaryotic cellular extracts were immobilized at their carboxyl-termini onto a preactivated amine-glass slide coated with a Gly3 linker. Immobilized proteins were revealed by specific antibodies, and the newly generated Sortag-protein chip can be used as a device for antigen and/or antibody screening. The specificity of the Sortase A (SrtA) reaction avoids purification steps in array building and allows immobilization of proteins in an oriented fashion. Previously, this versatile technology has been successfully employed for protein labeling and protein conjugation. Here, the tool is implemented to covalently link proteins of a viral genome onto a solid support. The system could readily be scaled up to proteins of larger genomes in order to develop protein arrays for high-throughput screening.

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Year:  2012        PMID: 22594688      PMCID: PMC3884033          DOI: 10.1021/bc200577u

Source DB:  PubMed          Journal:  Bioconjug Chem        ISSN: 1043-1802            Impact factor:   4.774


  29 in total

1.  Printing proteins as microarrays for high-throughput function determination.

Authors:  G MacBeath; S L Schreiber
Journal:  Science       Date:  2000-09-08       Impact factor: 47.728

Review 2.  Protein chip technology.

Authors:  Heng Zhu; Michael Snyder
Journal:  Curr Opin Chem Biol       Date:  2003-02       Impact factor: 8.822

3.  Covalent and selective immobilization of fusion proteins.

Authors:  Maik Kindermann; Nathalie George; Nils Johnsson; Kai Johnsson
Journal:  J Am Chem Soc       Date:  2003-07-02       Impact factor: 15.419

4.  Chemoselective attachment of biologically active proteins to surfaces by expressed protein ligation and its application for "protein chip" fabrication.

Authors:  Julio A Camarero; Youngeun Kwon; Matthew A Coleman
Journal:  J Am Chem Soc       Date:  2004-11-17       Impact factor: 15.419

5.  Global analysis of protein activities using proteome chips.

Authors:  H Zhu; M Bilgin; R Bangham; D Hall; A Casamayor; P Bertone; N Lan; R Jansen; S Bidlingmaier; T Houfek; T Mitchell; P Miller; R A Dean; M Gerstein; M Snyder
Journal:  Science       Date:  2001-07-26       Impact factor: 47.728

6.  Anchoring of surface proteins to the cell wall of Staphylococcus aureus. Sortase catalyzed in vitro transpeptidation reaction using LPXTG peptide and NH(2)-Gly(3) substrates.

Authors:  H Ton-That; S K Mazmanian; K F Faull; O Schneewind
Journal:  J Biol Chem       Date:  2000-03-31       Impact factor: 5.157

7.  Purification and characterization of sortase, the transpeptidase that cleaves surface proteins of Staphylococcus aureus at the LPXTG motif.

Authors:  H Ton-That; G Liu; S K Mazmanian; K F Faull; O Schneewind
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-26       Impact factor: 11.205

8.  Analysis of yeast protein kinases using protein chips.

Authors:  H Zhu; J F Klemic; S Chang; P Bertone; A Casamayor; K G Klemic; D Smith; M Gerstein; M A Reed; M Snyder
Journal:  Nat Genet       Date:  2000-11       Impact factor: 38.330

Review 9.  Receptor binding and membrane fusion in virus entry: the influenza hemagglutinin.

Authors:  J J Skehel; D C Wiley
Journal:  Annu Rev Biochem       Date:  2000       Impact factor: 23.643

10.  Analysis of the substrate specificity of the Staphylococcus aureus sortase transpeptidase SrtA.

Authors:  Ryan G Kruger; Balint Otvos; Brenda A Frankel; Matthew Bentley; Patrick Dostal; Dewey G McCafferty
Journal:  Biochemistry       Date:  2004-02-17       Impact factor: 3.162

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  8 in total

Review 1.  Enzymatic labeling of proteins: techniques and approaches.

Authors:  Mohammad Rashidian; Jonathan K Dozier; Mark D Distefano
Journal:  Bioconjug Chem       Date:  2013-08-21       Impact factor: 4.774

2.  Site-specific C-terminal and internal loop labeling of proteins using sortase-mediated reactions.

Authors:  Carla P Guimaraes; Martin D Witte; Christopher S Theile; Gunes Bozkurt; Lenka Kundrat; Annet E M Blom; Hidde L Ploegh
Journal:  Nat Protoc       Date:  2013-08-29       Impact factor: 13.491

3.  An in vitro compartmentalization-based method for the selection of bond-forming enzymes from large libraries.

Authors:  Paul Gianella; Erik L Snapp; Matthew Levy
Journal:  Biotechnol Bioeng       Date:  2016-02-08       Impact factor: 4.530

4.  Site-specific protein labeling via sortase-mediated transpeptidation.

Authors:  Maximilian Wei-Lin Popp; John M Antos; Hidde L Ploegh
Journal:  Curr Protoc Protein Sci       Date:  2009-04

Review 5.  Recent advances in covalent, site-specific protein immobilization.

Authors:  Morten Meldal; Sanne Schoffelen
Journal:  F1000Res       Date:  2016-09-12

6.  Covalent Modification of Synthetic Hydrogels with Bioactive Proteins via Sortase-Mediated Ligation.

Authors:  Elena Cambria; Kasper Renggli; Caroline C Ahrens; Christi D Cook; Carsten Kroll; Andrew T Krueger; Barbara Imperiali; Linda G Griffith
Journal:  Biomacromolecules       Date:  2015-07-10       Impact factor: 6.988

Review 7.  Broadening the scope of sortagging.

Authors:  Xiaolin Dai; Alexander Böker; Ulrich Glebe
Journal:  RSC Adv       Date:  2019-02-06       Impact factor: 4.036

8.  Site-Specific Protein Labeling via Sortase-Mediated Transpeptidation.

Authors:  John M Antos; Jessica Ingram; Tao Fang; Novalia Pishesha; Matthias C Truttmann; Hidde L Ploegh
Journal:  Curr Protoc Protein Sci       Date:  2017-08-01
  8 in total

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