Literature DB >> 22591516

Species boundaries in tintinnid ciliates: a case study--morphometric variability, molecular characterization, and temporal distribution of Helicostomella species (Ciliophora, Tintinnina).

Dapeng Xu1, Ping Sun, Mann Kyoon Shin, Young Ok Kim.   

Abstract

Tintinnids are a large group of planktonic ciliates with diverse morphologies. The range of variability in lorica shapes and sizes can be very high even within a single species depending on life stages and environmental conditions, which makes the delimitation of different species based on morphological criteria alone very difficult. Accordingly, comparisons of morphological and molecular variability in tintinnids are necessary to provide a pragmatic approach for establishing species boundaries within this diverse and poorly understood group. We investigated the temporal distribution of species of the hyaline tintinnid Helicostomella (Ciliophora, Tintinnina), which were collected daily from September 2008 to August 2009 in Jangmok Bay of Geoje Island on the south coast of Korea. Two forms - a long form and a short form, were discovered. The long form was found in cold waters in February and March whereas the short form occurred in warm waters from June to October. Thus, these two forms were seasonally isolated. However, all the morphological characteristics for these two forms overlap to some degree. A comparison of the small subunit (SSU) rDNA, ITS1-5.8S-ITS2, and ITS2 sequences from two forms revealed 0.5%, 3.8%, and 5.6% divergences, respectively. Morever, one compensatory base change (CBC) and three hemi-CBCs were identified from ITS2 secondary structures of these two forms. All these data suggest that these two forms represent two distinct species despite their highly similar lorica morphology. The phylogenetic position of the genus Helicostomella was also examined using SSU rDNA sequences.
© 2012 The Author(s) Journal of Eukaryotic Microbiology © 2012 International Society of Protistologists.

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Year:  2012        PMID: 22591516     DOI: 10.1111/j.1550-7408.2012.00625.x

Source DB:  PubMed          Journal:  J Eukaryot Microbiol        ISSN: 1066-5234            Impact factor:   3.346


  6 in total

1.  Multigene-based analyses of the phylogenetic evolution of oligotrich ciliates, with consideration of the internal transcribed spacer 2 secondary structure of three systematically ambiguous genera.

Authors:  Jiamei Li; Weiwei Liu; Shan Gao; Alan Warren; Weibo Song
Journal:  Eukaryot Cell       Date:  2013-01-11

2.  Declines in both redundant and trace species characterize the latitudinal diversity gradient in tintinnid ciliates.

Authors:  John R Dolan; Eun Jin Yang; Sung-Ho Kang; Tae Siek Rhee
Journal:  ISME J       Date:  2016-03-18       Impact factor: 10.302

3.  Two New Genera of Planktonic Ciliates and Insights into the Evolution of the Family Strombidiidae (Protista, Ciliophora, Oligotrichia).

Authors:  Weiwei Liu; Zhenzhen Yi; Dapeng Xu; John C Clamp; Jiqiu Li; Xiaofeng Lin; Weibo Song
Journal:  PLoS One       Date:  2015-06-29       Impact factor: 3.240

4.  Marked seasonality and high spatial variation in estuarine ciliates are driven by exchanges between the 'abundant' and 'intermediate' biospheres.

Authors:  Ping Sun; Liying Huang; Dapeng Xu; Bangqin Huang; Nengwang Chen; Alan Warren
Journal:  Sci Rep       Date:  2017-08-25       Impact factor: 4.379

5.  Ciliate Environmental Diversity Can Be Underestimated by the V4 Region of SSU rDNA: Insights from Species Delimitation and Multilocus Phylogeny of Pseudokeronopsis (Protist, Ciliophora).

Authors:  Zifeng Zhan; Ju Li; Kuidong Xu
Journal:  Microorganisms       Date:  2019-10-26

6.  Three rDNA Loci-Based Phylogenies of Tintinnid Ciliates (Ciliophora, Spirotrichea, Choreotrichida).

Authors:  Qianqian Zhang; Sabine Agatha; Wuchang Zhang; Jun Dong; Ying Yu; Nianzhi Jiao; Jun Gong
Journal:  J Eukaryot Microbiol       Date:  2016-08-30       Impact factor: 3.346

  6 in total

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