Literature DB >> 22590432

Bis(3-amino-propan-1-aminium) naphthalene-1,5-disulfonate dihydrate.

Shan Gao, Seik Weng Ng.   

Abstract

In the title hydrated salt, 2C(3)H(11)N(2) (+)·C(10)H(6)O(6)S(2) (2-)·2H(2)O, the anion lies on a center of inversion; its sulfonate -SO(3) group features one S-O bond that is longer than the other two. The O atom of this longer bond is the hydrogen-bond acceptor to the amino H atom of one cation and the ammonium H atom of another cation. In the crystal, N-H⋯O and O-H⋯O hydrogen bonds link the cations, anions and water mol-ecules into a three-dimensional network.

Entities:  

Year:  2012        PMID: 22590432      PMCID: PMC3344670          DOI: 10.1107/S1600536812018296

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure, see: Gao & Ng (2012 ▶).

Experimental

Crystal data

2C3H11N2 +·C10H6O6S2 2−·2H2O M = 472.58 Triclinic, a = 8.0913 (16) Å b = 8.1917 (16) Å c = 9.8062 (18) Å α = 71.182 (5)° β = 65.950 (5)° γ = 79.945 (5)° V = 561.12 (19) Å3 Z = 1 Mo Kα radiation μ = 0.29 mm−1 T = 293 K 0.21 × 0.17 × 0.17 mm

Data collection

Rigaku R-AXIS RAPID IP diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.942, T max = 0.953 5584 measured reflections 2552 independent reflections 2268 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.127 S = 1.05 2552 reflections 165 parameters 7 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.44 e Å−3 Δρmin = −0.39 e Å−3 Data collection: RAPID-AUTO (Rigaku, 1998 ▶); cell refinement: RAPID-AUTO; data reduction: CrystalClear (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812018296/xu5521sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812018296/xu5521Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812018296/xu5521Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
2C3H11N2+·C10H6O6S22·2H2OZ = 1
Mr = 472.58F(000) = 252
Triclinic, P1Dx = 1.399 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.0913 (16) ÅCell parameters from 3803 reflections
b = 8.1917 (16) Åθ = 3.0–27.5°
c = 9.8062 (18) ŵ = 0.29 mm1
α = 71.182 (5)°T = 293 K
β = 65.950 (5)°Prism, colorless
γ = 79.945 (5)°0.21 × 0.17 × 0.17 mm
V = 561.12 (19) Å3
Rigaku R-AXIS RAPID IP diffractometer2552 independent reflections
Radiation source: fine-focus sealed tube2268 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.039
ω scanθmax = 27.5°, θmin = 3.0°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)h = −10→9
Tmin = 0.942, Tmax = 0.953k = −10→10
5584 measured reflectionsl = −12→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.044H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.127w = 1/[σ2(Fo2) + (0.0736P)2 + 0.1592P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
2552 reflectionsΔρmax = 0.44 e Å3
165 parametersΔρmin = −0.39 e Å3
7 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.081 (12)
xyzUiso*/Ueq
S10.27701 (5)0.72860 (5)0.28439 (4)0.02880 (18)
O10.40860 (17)0.78029 (17)0.12668 (14)0.0406 (3)
O20.35741 (17)0.62846 (16)0.39549 (15)0.0402 (3)
O30.12666 (17)0.64501 (17)0.29413 (17)0.0425 (3)
O1W0.75757 (19)0.63049 (19)0.10446 (16)0.0421 (3)
H1W10.6524 (18)0.661 (3)0.106 (3)0.057 (7)*
H1W20.766 (4)0.5307 (17)0.096 (3)0.063 (8)*
N10.8221 (3)0.3040 (2)0.0702 (2)0.0437 (4)
H110.9387 (16)0.288 (3)0.053 (3)0.063 (8)*
H120.792 (4)0.294 (4)−0.003 (2)0.067 (8)*
N20.7492 (2)−0.3142 (2)0.36576 (18)0.0367 (4)
H210.744 (3)−0.340 (3)0.287 (2)0.059 (7)*
H220.701 (3)−0.400 (3)0.450 (2)0.065 (7)*
H230.8614 (16)−0.323 (3)0.361 (3)0.046 (6)*
C10.1830 (2)0.9236 (2)0.33721 (18)0.0269 (3)
C20.2538 (2)1.0749 (2)0.23475 (18)0.0320 (4)
H20.34961.07450.14110.038*
C30.1822 (2)1.2322 (2)0.27039 (19)0.0341 (4)
H30.23181.33520.20030.041*
C40.0411 (2)1.2350 (2)0.40653 (18)0.0297 (4)
H4A−0.00571.34030.42740.036*
C5−0.03570 (19)1.08034 (19)0.51689 (17)0.0251 (3)
C60.7250 (3)0.1771 (2)0.2140 (2)0.0387 (4)
H6A0.59620.19700.23560.046*
H6B0.74620.19510.29850.046*
C70.7781 (3)−0.0097 (2)0.2119 (2)0.0385 (4)
H7A0.7530−0.03000.13020.046*
H7B0.9073−0.03010.18820.046*
C80.6774 (2)−0.1352 (2)0.3650 (2)0.0360 (4)
H8A0.6896−0.10630.44880.043*
H8B0.5496−0.12620.38250.043*
U11U22U33U12U13U23
S10.0281 (3)0.0244 (2)0.0307 (3)−0.00188 (15)−0.00813 (18)−0.00714 (17)
O10.0406 (7)0.0360 (7)0.0315 (6)0.0011 (5)−0.0028 (5)−0.0076 (5)
O20.0405 (7)0.0329 (7)0.0413 (7)0.0000 (5)−0.0168 (6)−0.0019 (5)
O30.0366 (7)0.0390 (7)0.0580 (8)−0.0049 (5)−0.0135 (6)−0.0256 (6)
O1W0.0412 (7)0.0395 (8)0.0456 (8)0.0018 (6)−0.0141 (6)−0.0169 (6)
N10.0528 (10)0.0322 (8)0.0420 (9)−0.0036 (7)−0.0147 (8)−0.0085 (7)
N20.0376 (8)0.0327 (8)0.0368 (8)−0.0065 (6)−0.0146 (7)−0.0028 (6)
C10.0298 (7)0.0245 (8)0.0278 (7)−0.0035 (6)−0.0122 (6)−0.0063 (6)
C20.0339 (8)0.0307 (9)0.0262 (7)−0.0073 (6)−0.0066 (6)−0.0047 (6)
C30.0418 (9)0.0238 (8)0.0311 (8)−0.0107 (7)−0.0097 (7)−0.0011 (6)
C40.0368 (8)0.0210 (8)0.0297 (8)−0.0063 (6)−0.0110 (7)−0.0043 (6)
C50.0273 (7)0.0233 (8)0.0265 (7)−0.0050 (6)−0.0123 (6)−0.0046 (6)
C60.0396 (9)0.0340 (9)0.0424 (9)−0.0042 (7)−0.0133 (8)−0.0123 (8)
C70.0425 (9)0.0321 (9)0.0390 (9)−0.0020 (7)−0.0143 (8)−0.0087 (7)
C80.0337 (8)0.0347 (9)0.0395 (9)−0.0041 (7)−0.0125 (7)−0.0106 (7)
S1—O11.4484 (13)C2—H20.9300
S1—O21.4484 (13)C3—C41.362 (2)
S1—O31.4532 (13)C3—H30.9300
S1—C11.7848 (16)C4—C51.416 (2)
O1W—H1W10.840 (10)C4—H4A0.9300
O1W—H1W20.837 (10)C5—C5i1.427 (3)
N1—C61.457 (2)C5—C1i1.436 (2)
N1—H110.883 (10)C6—C71.520 (2)
N1—H120.879 (10)C6—H6A0.9700
N2—C81.479 (2)C6—H6B0.9700
N2—H210.886 (10)C7—C81.508 (2)
N2—H220.885 (10)C7—H7A0.9700
N2—H230.881 (9)C7—H7B0.9700
C1—C21.360 (2)C8—H8A0.9700
C1—C5i1.436 (2)C8—H8B0.9700
C2—C31.408 (2)
O1—S1—O2113.11 (8)C3—C4—C5121.11 (15)
O1—S1—O3111.96 (8)C3—C4—H4A119.4
O2—S1—O3112.63 (8)C5—C4—H4A119.4
O1—S1—C1106.07 (7)C4—C5—C5i119.01 (17)
O2—S1—C1106.32 (8)C4—C5—C1i123.18 (14)
O3—S1—C1106.10 (7)C5i—C5—C1i117.81 (16)
H1W1—O1W—H1W2100 (2)N1—C6—C7114.59 (16)
C6—N1—H11108.1 (17)N1—C6—H6A108.6
C6—N1—H12107.7 (18)C7—C6—H6A108.6
H11—N1—H12115 (3)N1—C6—H6B108.6
C8—N2—H21110.4 (16)C7—C6—H6B108.6
C8—N2—H22119.3 (18)H6A—C6—H6B107.6
H21—N2—H22107 (2)C8—C7—C6112.28 (15)
C8—N2—H23108.1 (15)C8—C7—H7A109.1
H21—N2—H23111 (2)C6—C7—H7A109.1
H22—N2—H23101 (2)C8—C7—H7B109.1
C2—C1—C5i121.35 (15)C6—C7—H7B109.1
C2—C1—S1118.04 (13)H7A—C7—H7B107.9
C5i—C1—S1120.60 (12)N2—C8—C7110.76 (14)
C1—C2—C3120.06 (15)N2—C8—H8A109.5
C1—C2—H2120.0C7—C8—H8A109.5
C3—C2—H2120.0N2—C8—H8B109.5
C4—C3—C2120.65 (15)C7—C8—H8B109.5
C4—C3—H3119.7H8A—C8—H8B108.1
C2—C3—H3119.7
O1—S1—C1—C2−4.68 (15)S1—C1—C2—C3179.05 (12)
O2—S1—C1—C2115.97 (14)C1—C2—C3—C4−0.5 (3)
O3—S1—C1—C2−123.91 (14)C2—C3—C4—C51.0 (3)
O1—S1—C1—C5i174.63 (12)C3—C4—C5—C5i−0.7 (3)
O2—S1—C1—C5i−64.71 (14)C3—C4—C5—C1i179.21 (15)
O3—S1—C1—C5i55.41 (14)N1—C6—C7—C8178.34 (16)
C5i—C1—C2—C3−0.3 (2)C6—C7—C8—N2−172.59 (15)
D—H···AD—HH···AD···AD—H···A
O1w—H1w1···O10.84 (1)2.00 (1)2.826 (2)166 (3)
O1w—H1w2···N10.84 (1)1.91 (1)2.736 (2)172 (3)
N1—H12···O3ii0.88 (1)2.55 (2)3.317 (2)147 (2)
N2—H21···O1wiii0.89 (1)1.84 (1)2.715 (2)172 (2)
N2—H22···O2iv0.89 (1)1.98 (1)2.845 (2)165 (3)
N2—H23···O3v0.88 (1)1.97 (1)2.825 (2)164 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1w—H1w1⋯O10.84 (1)2.00 (1)2.826 (2)166 (3)
O1w—H1w2⋯N10.84 (1)1.91 (1)2.736 (2)172 (3)
N1—H12⋯O3i0.88 (1)2.55 (2)3.317 (2)147 (2)
N2—H21⋯O1wii0.89 (1)1.84 (1)2.715 (2)172 (2)
N2—H22⋯O2iii0.89 (1)1.98 (1)2.845 (2)165 (3)
N2—H23⋯O3iv0.88 (1)1.97 (1)2.825 (2)164 (2)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Benzene-1,2-di(aminium) naphthalene-1,5-disulfonate methanol monosolvate trihydrate.

Authors:  Shan Gao; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-04-28
  2 in total

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