Literature DB >> 22590394

Guanidinium bromide-18-crown-6 (2/1).

Yu-Feng Wang1.   

Abstract

In the title compound, 2CH(6)N(3) (+)·2Br(-)·C(12)H(24)O(6), the 18-crown-6 mol-ecule lies about an inversion center, whereas the guanidinium cation and bromide anion are in general positions. The guanidinium cations link with the bromide anions and the crown ether mol-ecules via N-H⋯O and N-H⋯Br hydrogen bonds, thus forming a three-dimensional network.

Entities:  

Year:  2012        PMID: 22590394      PMCID: PMC3344632          DOI: 10.1107/S1600536812017394

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of crown ethers, see: Clark et al. (1998 ▶). For ferroelectric metal-organic compounds, see: Fu et al. (2009 ▶, 2011 ▶); Ye et al. (2006 ▶); Zhang et al. (2008 ▶, 2010 ▶). For structures of 18-crown-6 clathrates, see: Zhang & Zhao (2011 ▶); Ge & Zhao (2010 ▶)

Experimental

Crystal data

2CH6N3 +·2Br−·C12H24O6 M = 544.31 Monoclinic, a = 8.9354 (18) Å b = 9.860 (2) Å c = 14.306 (3) Å β = 101.39 (3)° V = 1235.6 (4) Å3 Z = 2 Mo Kα radiation μ = 3.32 mm−1 T = 293 K 0.20 × 0.20 × 0.20 mm

Data collection

Rigaku SCXmini diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.936, T max = 0.937 12464 measured reflections 2835 independent reflections 1968 reflections with I > 2σ(I) R int = 0.077

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.127 S = 1.11 2835 reflections 127 parameters H-atom parameters constrained Δρmax = 0.36 e Å−3 Δρmin = −0.79 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812017394/yk2049sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812017394/yk2049Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
2CH6N3+·2Br·C12H24O6F(000) = 560
Mr = 544.31Dx = 1.463 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 3638 reflections
a = 8.9354 (18) Åθ = 3.0–27.5°
b = 9.860 (2) ŵ = 3.32 mm1
c = 14.306 (3) ÅT = 293 K
β = 101.39 (3)°Block, colourless
V = 1235.6 (4) Å30.20 × 0.20 × 0.20 mm
Z = 2
Rigaku SCXmini diffractometer2835 independent reflections
Radiation source: fine-focus sealed tube1968 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.077
ω scansθmax = 27.5°, θmin = 3.1°
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)h = −11→11
Tmin = 0.936, Tmax = 0.937k = −12→12
12464 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.127H-atom parameters constrained
S = 1.11w = 1/[σ2(Fo2) + (0.0528P)2] where P = (Fo2 + 2Fc2)/3
2835 reflections(Δ/σ)max = 0.001
127 parametersΔρmax = 0.36 e Å3
0 restraintsΔρmin = −0.79 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O21.1811 (3)−0.2005 (3)0.62582 (18)0.0572 (7)
O31.2804 (3)0.0677 (3)0.6025 (2)0.0649 (8)
O10.8672 (3)−0.2293 (3)0.5560 (2)0.0759 (9)
C31.3789 (5)−0.0401 (5)0.6413 (4)0.0701 (13)
H3A1.4677−0.00430.68440.084*
H3B1.4135−0.08870.59050.084*
C60.9606 (6)−0.3369 (5)0.5989 (4)0.0805 (14)
H6A1.0024−0.38540.55090.097*
H6B0.9004−0.40000.62820.097*
C51.0855 (6)−0.2815 (5)0.6716 (3)0.0748 (13)
H5A1.0439−0.22690.71680.090*
H5B1.1441−0.35490.70610.090*
C41.2942 (5)−0.1325 (4)0.6931 (3)0.0641 (12)
H4A1.3635−0.19800.72920.077*
H4B1.2465−0.08140.73720.077*
C70.7498 (6)−0.2745 (5)0.4820 (4)0.0882 (16)
H7A0.6934−0.34710.50500.106*
H7B0.7932−0.30930.42980.106*
C21.3526 (5)0.1611 (6)0.5511 (4)0.0848 (15)
H2A1.38090.11600.49690.102*
H2B1.44500.19490.59170.102*
N21.1162 (4)−0.1452 (4)0.4063 (3)0.0766 (11)
H2C1.1030−0.13000.46330.092*
H2D1.0709−0.09540.35990.092*
Br11.01901 (4)−0.03281 (4)0.16380 (3)0.05407 (18)
N31.2257 (4)−0.2677 (4)0.3022 (2)0.0643 (9)
H3C1.2841−0.33250.29110.077*
H3D1.1801−0.21740.25620.077*
C11.2061 (4)−0.2453 (4)0.3900 (3)0.0508 (9)
N11.2761 (4)−0.3225 (3)0.4595 (2)0.0592 (9)
H1A1.3344−0.38710.44780.071*
H1B1.2638−0.30850.51680.071*
U11U22U33U12U13U23
O20.0681 (18)0.0558 (17)0.0495 (15)0.0000 (13)0.0161 (13)−0.0003 (13)
O30.0545 (17)0.078 (2)0.0651 (19)−0.0106 (15)0.0176 (14)0.0009 (16)
O10.082 (2)0.0625 (19)0.079 (2)−0.0205 (16)0.0071 (17)0.0001 (17)
C30.050 (3)0.087 (3)0.073 (3)0.000 (2)0.010 (2)−0.027 (3)
C60.100 (4)0.055 (3)0.091 (4)−0.019 (3)0.032 (3)0.009 (3)
C50.095 (3)0.065 (3)0.065 (3)0.005 (3)0.018 (3)0.021 (2)
C40.071 (3)0.067 (3)0.050 (2)0.017 (2)0.002 (2)−0.010 (2)
C70.106 (4)0.087 (4)0.068 (3)−0.055 (3)0.009 (3)0.002 (3)
C20.060 (3)0.122 (4)0.074 (3)−0.040 (3)0.015 (2)0.003 (3)
N20.101 (3)0.074 (2)0.059 (2)0.034 (2)0.026 (2)0.0060 (19)
Br10.0649 (3)0.0498 (3)0.0474 (3)0.00012 (18)0.01084 (19)0.00461 (18)
N30.070 (2)0.076 (2)0.045 (2)0.0250 (18)0.0076 (16)0.0070 (17)
C10.050 (2)0.049 (2)0.052 (2)−0.0038 (17)0.0091 (18)0.000 (2)
N10.075 (2)0.060 (2)0.0410 (18)0.0135 (17)0.0093 (16)0.0063 (17)
O2—C41.418 (5)C7—C2i1.464 (7)
O2—C51.420 (5)C7—H7A0.9700
O3—C21.411 (5)C7—H7B0.9700
O3—C31.421 (5)C2—C7i1.464 (7)
O1—C71.407 (5)C2—H2A0.9700
O1—C61.413 (5)C2—H2B0.9700
C3—C41.474 (6)N2—C11.322 (5)
C3—H3A0.9700N2—H2C0.8600
C3—H3B0.9700N2—H2D0.8600
C6—C51.472 (7)N3—C11.320 (5)
C6—H6A0.9700N3—H3C0.8600
C6—H6B0.9700N3—H3D0.8600
C5—H5A0.9700C1—N11.309 (5)
C5—H5B0.9700N1—H1A0.8600
C4—H4A0.9700N1—H1B0.8600
C4—H4B0.9700
C4—O2—C5111.5 (3)H4A—C4—H4B108.4
C2—O3—C3112.3 (4)O1—C7—C2i109.1 (4)
C7—O1—C6112.1 (4)O1—C7—H7A109.9
O3—C3—C4108.6 (3)C2i—C7—H7A109.9
O3—C3—H3A110.0O1—C7—H7B109.9
C4—C3—H3A110.0C2i—C7—H7B109.9
O3—C3—H3B110.0H7A—C7—H7B108.3
C4—C3—H3B110.0O3—C2—C7i110.3 (4)
H3A—C3—H3B108.4O3—C2—H2A109.6
O1—C6—C5109.2 (4)C7i—C2—H2A109.6
O1—C6—H6A109.8O3—C2—H2B109.6
C5—C6—H6A109.8C7i—C2—H2B109.6
O1—C6—H6B109.8H2A—C2—H2B108.1
C5—C6—H6B109.8C1—N2—H2C120.0
H6A—C6—H6B108.3C1—N2—H2D120.0
O2—C5—C6108.9 (4)H2C—N2—H2D120.0
O2—C5—H5A109.9C1—N3—H3C120.0
C6—C5—H5A109.9C1—N3—H3D120.0
O2—C5—H5B109.9H3C—N3—H3D120.0
C6—C5—H5B109.9N1—C1—N3119.5 (4)
H5A—C5—H5B108.3N1—C1—N2121.0 (4)
O2—C4—C3108.6 (3)N3—C1—N2119.5 (4)
O2—C4—H4A110.0C1—N1—H1A120.0
C3—C4—H4A110.0C1—N1—H1B120.0
O2—C4—H4B110.0H1A—N1—H1B120.0
C3—C4—H4B110.0
D—H···AD—HH···AD···AD—H···A
N1—H1A···Br1ii0.862.683.470 (3)154
N1—H1B···O20.862.142.938 (4)155
N2—H2C···O20.862.403.127 (5)143
N2—H2D···Br10.862.823.582 (4)149
N3—H3D···Br10.862.533.354 (3)162
N3—H3C···Br1ii0.862.643.440 (3)156
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯Br1i0.862.683.470 (3)154
N1—H1B⋯O20.862.142.938 (4)155
N2—H2C⋯O20.862.403.127 (5)143
N2—H2D⋯Br10.862.823.582 (4)149
N3—H3D⋯Br10.862.533.354 (3)162
N3—H3C⋯Br1i0.862.643.440 (3)156

Symmetry code: (i) .

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