Literature DB >> 21522355

4-Iodo-anilinium perchlorate 18-crown-6 clathrate.

Yi Zhang1, Min-Min Zhao.   

Abstract

In the title compound, C(6)H(7)IN(+)·ClO(4) (-)·C(12)H(24)O(6), the proton-ated 4-iodo-anilinium cation inter-acts with the 18-crown-6 through three N-H⋯O hydrogen bonds, forming a rotator-stator-like structure. The cation, anion and 18-crown-6 mol-ecule all have crystallographically imposed mirror symmetry.

Entities:  

Year:  2011        PMID: 21522355      PMCID: PMC3052035          DOI: 10.1107/S1600536811004260

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structure of a related 18-crown-6 clathrate, see: Ge & Zhao (2010 ▶). For ferroelectric properties, see: Fu et al. (2007 ▶); Ye et al.(2009 ▶); Zhang et al. (2009 ▶).

Experimental

Crystal data

C6H7INClO4 −·C12H24O6 M = 583.79 Orthorhombic, a = 15.8805 (11) Å b = 11.3878 (11) Å c = 12.6754 (8) Å V = 2292.3 (3) Å3 Z = 4 Mo Kα radiation μ = 1.57 mm−1 T = 93 K 0.40 × 0.30 × 0.20 mm

Data collection

Rigaku SCXmini diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.575, T max = 0.731 24048 measured reflections 2755 independent reflections 2611 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.024 wR(F 2) = 0.093 S = 1.11 2755 reflections 154 parameters H-atom parameters constrained Δρmax = 0.81 e Å−3 Δρmin = −0.65 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811004260/rz2549sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811004260/rz2549Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C6H7IN+·ClO4·C12H24O6F(000) = 1184
Mr = 583.79Dx = 1.692 Mg m3
Orthorhombic, PnmaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2nCell parameters from 17071 reflections
a = 15.8805 (11) Åθ = 3.2–27.8°
b = 11.3878 (11) ŵ = 1.57 mm1
c = 12.6754 (8) ÅT = 93 K
V = 2292.3 (3) Å3Prism, colourless
Z = 40.40 × 0.30 × 0.20 mm
Rigaku SCXmini diffractometer2755 independent reflections
Radiation source: fine-focus sealed tube2611 reflections with I > 2σ(I)
graphiteRint = 0.034
Detector resolution: 13.6612 pixels mm-1θmax = 27.5°, θmin = 2.1°
CCD_Profile_fitting scansh = −20→20
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −14→14
Tmin = 0.575, Tmax = 0.731l = −16→16
24048 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.024Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.093H-atom parameters constrained
S = 1.11w = 1/[σ2(Fo2) + (0.0591P)2 + 1.2714P] where P = (Fo2 + 2Fc2)/3
2755 reflections(Δ/σ)max < 0.001
154 parametersΔρmax = 0.81 e Å3
0 restraintsΔρmin = −0.65 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
I11.020717 (13)0.75000.497027 (14)0.01781 (10)
N20.69020 (16)0.75000.21864 (19)0.0118 (5)
H2A0.69190.68500.17820.018*
H2C0.64400.75000.25990.018*
C250.87428 (14)0.6439 (2)0.37576 (16)0.0155 (4)
H25A0.89940.57110.39750.019*
C260.80150 (13)0.64394 (18)0.31502 (16)0.0141 (4)
H26A0.77570.57130.29410.017*
C270.76611 (18)0.75000.2846 (2)0.0116 (5)
C300.91063 (18)0.75000.4050 (2)0.0146 (6)
O40.79657 (9)0.45595 (13)0.59043 (12)0.0152 (3)
O50.70915 (15)0.25000.52965 (18)0.0158 (4)
C60.81605 (14)0.56511 (19)0.64275 (17)0.0160 (4)
H6A0.77300.58300.69470.019*
H6B0.81770.62860.59170.019*
C70.71692 (14)0.4594 (2)0.53731 (19)0.0176 (5)
H7A0.71240.53090.49610.021*
H7B0.67150.45840.58850.021*
C80.71071 (15)0.3540 (2)0.46600 (18)0.0182 (5)
H8A0.65980.35870.42390.022*
H8B0.75860.35180.41860.022*
O10.89363 (9)0.46966 (13)0.78008 (12)0.0141 (3)
O20.95815 (15)0.25000.84574 (18)0.0137 (4)
C10.97204 (13)0.4574 (2)0.83409 (18)0.0155 (4)
H1A0.98410.52820.87390.019*
H1B1.01710.44560.78350.019*
C20.96711 (14)0.35433 (19)0.90738 (17)0.0150 (4)
H2D1.01780.34980.94990.018*
H2E0.91930.36290.95430.018*
Cl10.60734 (4)0.75000.70231 (5)0.01306 (16)
O170.62206 (10)0.64643 (15)0.76547 (13)0.0230 (4)
O210.52124 (13)0.75000.6644 (2)0.0173 (5)
O220.66395 (14)0.75000.61313 (17)0.0179 (5)
C50.90019 (14)0.55317 (19)0.69569 (17)0.0157 (4)
H5A0.94190.52690.64500.019*
H5B0.91790.62870.72330.019*
U11U22U33U12U13U23
I10.01152 (15)0.02558 (16)0.01632 (15)0.000−0.00231 (6)0.000
N20.0115 (11)0.0107 (11)0.0132 (11)0.0000.0000 (10)0.000
C250.0162 (10)0.0170 (10)0.0135 (9)0.0027 (8)0.0001 (8)0.0020 (8)
C260.0154 (10)0.0123 (10)0.0145 (10)−0.0008 (8)0.0009 (8)−0.0015 (8)
C270.0095 (13)0.0148 (14)0.0104 (13)0.0000.0009 (11)0.000
C300.0101 (13)0.0228 (15)0.0108 (13)0.0000.0019 (11)0.000
O40.0136 (7)0.0131 (7)0.0189 (7)0.0020 (6)−0.0022 (6)0.0007 (6)
O50.0195 (11)0.0148 (11)0.0131 (10)0.000−0.0012 (9)0.000
C60.0195 (10)0.0107 (10)0.0177 (10)0.0017 (8)0.0015 (9)0.0025 (8)
C70.0152 (10)0.0195 (11)0.0180 (11)0.0027 (8)−0.0034 (9)0.0037 (9)
C80.0181 (11)0.0235 (12)0.0128 (10)0.0002 (9)−0.0026 (9)0.0047 (9)
O10.0130 (7)0.0137 (7)0.0156 (7)−0.0019 (5)−0.0003 (6)0.0031 (6)
O20.0184 (10)0.0099 (10)0.0128 (10)0.000−0.0013 (9)0.000
C10.0137 (10)0.0138 (11)0.0189 (11)−0.0020 (8)−0.0009 (8)−0.0013 (8)
C20.0158 (10)0.0142 (10)0.0151 (10)0.0002 (8)−0.0015 (8)−0.0027 (8)
Cl10.0118 (3)0.0126 (3)0.0148 (3)0.0000.0005 (3)0.000
O170.0210 (8)0.0224 (9)0.0257 (9)0.0028 (7)0.0004 (7)0.0111 (7)
O210.0116 (11)0.0177 (12)0.0225 (13)0.000−0.0016 (8)0.000
O220.0154 (11)0.0215 (11)0.0169 (11)0.0000.0053 (9)0.000
C50.0188 (10)0.0120 (10)0.0163 (10)−0.0030 (8)0.0027 (8)0.0021 (8)
I1—C302.102 (3)C7—H7A0.9700
N2—C271.467 (4)C7—H7B0.9702
N2—H2A0.9002C8—H8A0.9700
N2—H2C0.9006C8—H8B0.9700
C25—C261.389 (3)O1—C11.428 (3)
C25—C301.390 (3)O1—C51.435 (2)
C25—H25A0.9599O2—C21.429 (2)
C26—C271.387 (3)O2—C2ii1.429 (2)
C26—H26A0.9601C1—C21.499 (3)
C27—C26i1.387 (3)C1—H1A0.9699
C30—C25i1.390 (3)C1—H1B0.9700
O4—C71.433 (3)C2—H2D0.9701
O4—C61.443 (3)C2—H2E0.9701
O5—C8ii1.433 (3)Cl1—O221.444 (2)
O5—C81.433 (3)Cl1—O17i1.4445 (16)
C6—C51.501 (3)Cl1—O171.4445 (16)
C6—H6A0.9700Cl1—O211.449 (2)
C6—H6B0.9701C5—H5A0.9701
C7—C81.506 (3)C5—H5B0.9700
C27—N2—H2A107.4C7—C8—H8A110.0
C27—N2—H2C109.7O5—C8—H8B109.9
H2A—N2—H2C110.8C7—C8—H8B109.9
C26—C25—C30119.5 (2)H8A—C8—H8B108.3
C26—C25—H25A120.4C1—O1—C5111.03 (16)
C30—C25—H25A120.1C2—O2—C2ii112.5 (2)
C27—C26—C25119.5 (2)O1—C1—C2109.15 (17)
C27—C26—H26A120.0O1—C1—H1A109.9
C25—C26—H26A120.5C2—C1—H1A109.8
C26i—C27—C26121.1 (3)O1—C1—H1B109.9
C26i—C27—N2119.44 (13)C2—C1—H1B109.8
C26—C27—N2119.44 (14)H1A—C1—H1B108.3
C25—C30—C25i120.9 (3)O2—C2—C1108.51 (18)
C25—C30—I1119.56 (14)O2—C2—H2D110.0
C25i—C30—I1119.56 (14)C1—C2—H2D110.0
C7—O4—C6112.42 (16)O2—C2—H2E110.0
C8ii—O5—C8111.4 (2)C1—C2—H2E110.0
O4—C6—C5108.56 (17)H2D—C2—H2E108.4
O4—C6—H6A110.0O22—Cl1—O17i109.46 (9)
C5—C6—H6A110.0O22—Cl1—O17109.46 (9)
O4—C6—H6B110.0O17i—Cl1—O17109.47 (15)
C5—C6—H6B110.0O22—Cl1—O21109.14 (14)
H6A—C6—H6B108.4O17i—Cl1—O21109.65 (9)
O4—C7—C8108.52 (18)O17—Cl1—O21109.65 (9)
O4—C7—H7A110.0O1—C5—C6109.19 (17)
C8—C7—H7A109.9O1—C5—H5A109.8
O4—C7—H7B110.0C6—C5—H5A109.9
C8—C7—H7B110.0O1—C5—H5B109.9
H7A—C7—H7B108.4C6—C5—H5B109.8
O5—C8—C7108.78 (18)H5A—C5—H5B108.3
O5—C8—H8A109.9
D—H···AD—HH···AD···AD—H···A
N2—H2A···O4iii0.901.962.861 (2)176
N2—H2C···O2iii0.901.952.854 (3)178
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯O4i0.901.962.861 (2)176
N2—H2C⋯O2i0.901.952.854 (3)178

Symmetry code: (i) .

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