Literature DB >> 22590378

11-(4-Meth-oxy-phen-yl)-3,3-dimethyl-2,3,4,5,10,11-hexa-hydro-1H-dibenzo[b,e][1,4]diazepin-1-one monohydrate.

Olatomide A Fadare, Pius O Adelani, Adebomi A Ikotun, Craig A Obafemi.   

Abstract

In the title compound, C(22)H(24)N(2)O(2)·H(2)O, the co-crystallized water mol-ecule inter-acts with the N and O atoms of the mol-ecule through O(w)-H⋯N, O(w)-H⋯O(meth-yl) and N-H⋯O(w) hydrogen-bonding inter-actions. These hydrogen bonds, along with the inter-molecular N-H⋯O=C hydrogen-bonding inter-actions, connect the mol-ecules into a three-dimensional network. The dihedral angle between the two aromatic rings is 65.46 (10)°.

Entities:  

Year:  2012        PMID: 22590378      PMCID: PMC3344616          DOI: 10.1107/S1600536812016194

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details of the synthesis, see: Hanze et al. (1963 ▶); Rashed et al. (1993 ▶); Kolos et al. (2004 ▶); Cortés et al. (2007 ▶); Ajani et al. (2010 ▶). For the biological activity of dibenzo[b,e][1,4]diazepinones, see: Beccalli et al. (2005 ▶); Farnet et al. (2005 ▶); Joergensen et al. (1996 ▶); McAlpine et al. (2008 ▶); McGowan et al. (2009 ▶).

Experimental

Crystal data

C22H24N2O2·H2O M = 366.45 Monoclinic, a = 10.684 (7) Å b = 16.973 (12) Å c = 11.174 (8) Å β = 101.490 (9)° V = 1986 (2) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 296 K 0.04 × 0.02 × 0.01 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.244, T max = 0.323 22692 measured reflections 4529 independent reflections 2187 reflections with I > 2σ(I) R int = 0.087

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.106 S = 0.83 4529 reflections 257 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.19 e Å−3 Δρmin = −0.16 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812016194/ff2060sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812016194/ff2060Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812016194/ff2060Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C22H24N2O2·H2OF(000) = 784
Mr = 366.45Dx = 1.226 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2566 reflections
a = 10.684 (7) Åθ = 2.2–21.4°
b = 16.973 (12) ŵ = 0.08 mm1
c = 11.174 (8) ÅT = 296 K
β = 101.490 (9)°Rectangular tablet, light yellow
V = 1986 (2) Å30.04 × 0.02 × 0.01 mm
Z = 4
Bruker APEXII CCD diffractometer4529 independent reflections
Radiation source: fine-focus sealed tube2187 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.087
φ and ω scansθmax = 27.5°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −13→13
Tmin = 0.244, Tmax = 0.323k = −21→22
22692 measured reflectionsl = −14→14
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.043H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.106w = 1/[σ2(Fo2) + (0.0442P)2] where P = (Fo2 + 2Fc2)/3
S = 0.83(Δ/σ)max < 0.001
4529 reflectionsΔρmax = 0.19 e Å3
257 parametersΔρmin = −0.16 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0082 (9)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.69308 (13)−0.00644 (8)0.04879 (12)0.0381 (4)
H1A0.6703−0.05090.01420.046*
N20.68575 (13)0.12181 (9)0.21811 (13)0.0341 (4)
H2C0.6841 (17)0.1561 (10)0.2848 (17)0.053 (6)*
O10.68552 (12)0.26436 (7)−0.07109 (11)0.0459 (4)
O21.28931 (13)0.17001 (10)0.27104 (13)0.0787 (5)
O1W1.41964 (16)0.15384 (8)0.07513 (13)0.0520 (4)
H1C1.371 (2)0.1659 (14)0.140 (2)0.104 (9)*
H1B1.506 (3)0.1427 (15)0.120 (2)0.124 (11)*
C10.66212 (16)0.19349 (11)−0.09321 (15)0.0346 (4)
C20.59266 (18)0.16858 (11)−0.21814 (15)0.0425 (5)
H2A0.60570.2081−0.27720.051*
H2B0.50190.1661−0.21860.051*
C30.63682 (17)0.08909 (11)−0.25676 (15)0.0401 (5)
C40.61823 (18)0.03053 (10)−0.15837 (15)0.0398 (5)
H4A0.52750.0210−0.16580.048*
H4B0.6577−0.0190−0.17320.048*
C50.67258 (15)0.05645 (10)−0.02950 (15)0.0318 (4)
C60.69591 (15)0.13400 (10)0.00061 (15)0.0307 (4)
C70.77701 (19)0.09265 (13)−0.26960 (18)0.0574 (6)
H7A0.82920.1086−0.19330.086*
H7B0.78590.1300−0.33180.086*
H7C0.80360.0416−0.29170.086*
C80.5557 (2)0.06348 (13)−0.37901 (17)0.0596 (6)
H8A0.46760.0610−0.37240.089*
H8B0.58320.0125−0.40050.089*
H8C0.56550.1009−0.44100.089*
C90.74429 (16)−0.01265 (10)0.17528 (15)0.0361 (4)
C100.74023 (16)0.04797 (10)0.25838 (15)0.0349 (4)
C110.74741 (16)0.16327 (10)0.12753 (15)0.0322 (4)
H11A0.71980.21830.12830.039*
C120.79555 (19)−0.08505 (11)0.21730 (17)0.0506 (5)
H12A0.7985−0.12540.16170.061*
C130.8421 (2)−0.09834 (13)0.33978 (19)0.0606 (6)
H13A0.8757−0.14730.36660.073*
C140.8386 (2)−0.03852 (13)0.42190 (18)0.0567 (6)
H14A0.8694−0.04690.50480.068*
C150.78916 (18)0.03402 (11)0.38124 (16)0.0451 (5)
H15A0.78860.07440.43740.054*
C160.89251 (16)0.16503 (10)0.16580 (15)0.0319 (4)
C170.94955 (17)0.19550 (11)0.27789 (16)0.0423 (5)
H17A0.89780.21490.32900.051*
C181.08113 (18)0.19834 (11)0.31741 (17)0.0439 (5)
H18A1.11670.21910.39360.053*
C191.15759 (18)0.17016 (13)0.24243 (18)0.0508 (5)
C201.1030 (2)0.14011 (16)0.1304 (2)0.0809 (9)
H20A1.15480.12130.07910.097*
C210.97209 (19)0.13747 (14)0.09301 (18)0.0625 (7)
H21A0.93700.11660.01680.075*
C221.35131 (19)0.19213 (14)0.38866 (18)0.0643 (7)
H22A1.44210.18920.39460.096*
H22B1.32650.15720.44740.096*
H22C1.32780.24510.40460.096*
U11U22U33U12U13U23
N10.0504 (10)0.0309 (9)0.0314 (9)−0.0015 (7)0.0045 (7)−0.0035 (7)
N20.0364 (9)0.0381 (9)0.0299 (8)−0.0002 (7)0.0113 (7)−0.0040 (7)
O10.0576 (9)0.0375 (8)0.0420 (8)−0.0038 (7)0.0082 (6)0.0037 (6)
O20.0309 (8)0.1414 (15)0.0598 (11)0.0007 (9)−0.0007 (7)−0.0285 (10)
O1W0.0470 (9)0.0548 (9)0.0536 (10)−0.0013 (7)0.0083 (8)−0.0027 (7)
C10.0310 (10)0.0394 (11)0.0342 (11)−0.0007 (8)0.0083 (8)0.0025 (9)
C20.0436 (12)0.0475 (12)0.0343 (11)−0.0036 (9)0.0031 (9)0.0068 (9)
C30.0414 (11)0.0503 (12)0.0273 (10)−0.0052 (9)0.0034 (8)−0.0031 (9)
C40.0459 (11)0.0398 (11)0.0315 (10)−0.0048 (9)0.0026 (8)−0.0033 (8)
C50.0302 (10)0.0372 (11)0.0277 (10)−0.0007 (8)0.0050 (8)0.0011 (8)
C60.0273 (9)0.0363 (11)0.0285 (10)0.0012 (8)0.0055 (7)0.0005 (8)
C70.0547 (14)0.0787 (16)0.0417 (12)−0.0058 (12)0.0164 (10)−0.0086 (11)
C80.0718 (15)0.0698 (15)0.0315 (11)−0.0090 (12)−0.0035 (10)−0.0008 (10)
C90.0406 (11)0.0384 (11)0.0289 (10)−0.0023 (9)0.0057 (8)0.0017 (8)
C100.0337 (10)0.0414 (11)0.0301 (10)−0.0037 (8)0.0075 (8)0.0003 (9)
C110.0325 (10)0.0330 (10)0.0317 (10)0.0009 (8)0.0076 (8)−0.0014 (8)
C120.0680 (15)0.0400 (12)0.0413 (12)0.0052 (10)0.0053 (10)0.0018 (10)
C130.0780 (17)0.0504 (14)0.0476 (14)0.0080 (12)−0.0010 (12)0.0123 (11)
C140.0714 (16)0.0598 (15)0.0342 (12)−0.0066 (12)−0.0011 (10)0.0102 (11)
C150.0541 (13)0.0500 (13)0.0298 (11)−0.0085 (10)0.0052 (9)−0.0001 (9)
C160.0310 (10)0.0342 (10)0.0300 (10)0.0004 (8)0.0049 (8)−0.0010 (8)
C170.0358 (11)0.0522 (12)0.0390 (12)−0.0019 (9)0.0077 (9)−0.0100 (9)
C180.0419 (12)0.0506 (12)0.0367 (11)−0.0049 (10)0.0019 (9)−0.0064 (9)
C190.0284 (11)0.0751 (15)0.0464 (13)−0.0006 (10)0.0017 (9)−0.0082 (11)
C200.0339 (13)0.153 (3)0.0556 (15)0.0073 (14)0.0094 (11)−0.0419 (15)
C210.0357 (12)0.1076 (19)0.0418 (13)0.0026 (12)0.0020 (10)−0.0293 (12)
C220.0390 (13)0.0911 (18)0.0553 (15)−0.0085 (12)−0.0084 (11)0.0041 (13)
N1—C51.370 (2)C8—H8B0.9600
N1—C91.414 (2)C8—H8C0.9600
N1—H1A0.8600C9—C121.389 (2)
N2—C101.417 (2)C9—C101.392 (2)
N2—C111.490 (2)C10—C151.388 (2)
N2—H2C0.949 (19)C11—C161.524 (2)
O1—C11.243 (2)C11—H11A0.9800
O2—C191.380 (2)C12—C131.378 (3)
O2—C221.400 (2)C12—H12A0.9300
O1W—H1C1.00 (3)C13—C141.374 (3)
O1W—H1B0.97 (3)C13—H13A0.9300
C1—C61.449 (2)C14—C151.380 (3)
C1—C21.505 (2)C14—H14A0.9300
C2—C31.520 (3)C15—H15A0.9300
C2—H2A0.9700C16—C211.371 (2)
C2—H2B0.9700C16—C171.380 (2)
C3—C41.524 (2)C17—C181.388 (3)
C3—C81.528 (2)C17—H17A0.9300
C3—C71.534 (3)C18—C191.368 (3)
C4—C51.507 (2)C18—H18A0.9300
C4—H4A0.9700C19—C201.369 (3)
C4—H4B0.9700C20—C211.378 (3)
C5—C61.369 (2)C20—H20A0.9300
C6—C111.500 (2)C21—H21A0.9300
C7—H7A0.9600C22—H22A0.9600
C7—H7B0.9600C22—H22B0.9600
C7—H7C0.9600C22—H22C0.9600
C8—H8A0.9600
C5—N1—C9132.62 (15)C12—C9—N1116.87 (16)
C5—N1—H1A113.7C10—C9—N1123.65 (16)
C9—N1—H1A113.7C15—C10—C9118.53 (17)
C10—N2—C11115.11 (14)C15—C10—N2120.98 (16)
C10—N2—H2C111.4 (11)C9—C10—N2120.48 (16)
C11—N2—H2C108.9 (11)N2—C11—C6110.93 (14)
C19—O2—C22119.15 (16)N2—C11—C16112.42 (14)
H1C—O1W—H1B104 (2)C6—C11—C16115.65 (14)
O1—C1—C6121.29 (16)N2—C11—H11A105.7
O1—C1—C2119.90 (16)C6—C11—H11A105.7
C6—C1—C2118.76 (16)C16—C11—H11A105.7
C1—C2—C3112.89 (15)C13—C12—C9121.37 (19)
C1—C2—H2A109.0C13—C12—H12A119.3
C3—C2—H2A109.0C9—C12—H12A119.3
C1—C2—H2B109.0C14—C13—C12119.3 (2)
C3—C2—H2B109.0C14—C13—H13A120.3
H2A—C2—H2B107.8C12—C13—H13A120.3
C2—C3—C4106.36 (15)C13—C14—C15119.93 (19)
C2—C3—C8110.71 (15)C13—C14—H14A120.0
C4—C3—C8109.11 (16)C15—C14—H14A120.0
C2—C3—C7110.83 (15)C14—C15—C10121.43 (18)
C4—C3—C7111.29 (16)C14—C15—H15A119.3
C8—C3—C7108.53 (16)C10—C15—H15A119.3
C5—C4—C3114.71 (15)C21—C16—C17116.91 (17)
C5—C4—H4A108.6C21—C16—C11122.92 (16)
C3—C4—H4A108.6C17—C16—C11120.17 (15)
C5—C4—H4B108.6C16—C17—C18122.55 (17)
C3—C4—H4B108.6C16—C17—H17A118.7
H4A—C4—H4B107.6C18—C17—H17A118.7
C6—C5—N1126.45 (16)C19—C18—C17118.93 (18)
C6—C5—C4122.15 (15)C19—C18—H18A120.5
N1—C5—C4111.40 (15)C17—C18—H18A120.5
C5—C6—C1119.04 (16)C18—C19—C20119.49 (19)
C5—C6—C11124.43 (15)C18—C19—O2124.40 (18)
C1—C6—C11116.42 (16)C20—C19—O2116.12 (18)
C3—C7—H7A109.5C19—C20—C21120.7 (2)
C3—C7—H7B109.5C19—C20—H20A119.6
H7A—C7—H7B109.5C21—C20—H20A119.6
C3—C7—H7C109.5C16—C21—C20121.38 (19)
H7A—C7—H7C109.5C16—C21—H21A119.3
H7B—C7—H7C109.5C20—C21—H21A119.3
C3—C8—H8A109.5O2—C22—H22A109.5
C3—C8—H8B109.5O2—C22—H22B109.5
H8A—C8—H8B109.5H22A—C22—H22B109.5
C3—C8—H8C109.5O2—C22—H22C109.5
H8A—C8—H8C109.5H22A—C22—H22C109.5
H8B—C8—H8C109.5H22B—C22—H22C109.5
C12—C9—C10119.41 (17)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O1Wi0.862.142.994 (3)170
O1W—H1B···N2ii0.98 (3)2.04 (3)3.020 (3)178.2 (14)
O1W—H1C···O20.99 (2)1.85 (2)2.832 (3)170 (2)
N2—H2C···O1iii0.949 (18)2.099 (18)3.047 (3)177.4 (13)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O1Wi0.862.142.994 (3)170
O1W—H1B⋯N2ii0.98 (3)2.04 (3)3.020 (3)178.2 (14)
O1W—H1C⋯O20.99 (2)1.85 (2)2.832 (3)170 (2)
N2—H2C⋯O1iii0.949 (18)2.099 (18)3.047 (3)177.4 (13)

Symmetry codes: (i) ; (ii) ; (iii) .

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