| Literature DB >> 22590331 |
Huaqin Zheng1, Hui Deng, Yunyun Chen, Ding Li.
Abstract
IN THE TITLE COMPOUND [SYSTEMATIC NAME: 2-hy-droxy-N-(5-nitro-1,3-thia-zol-2-yl)benzamide pyridine monosolvate], C(10)H(7)N(3)O(4)S·C(5)H(5)N, the dihedral angle between the pyridine and benzamide rings is 80.55 (7)°. An intamolecular O-H⋯N hydrogen bond occurs in the tizoxanide. In the crystal, the components are linked by an O-H⋯N hydrogen bond, forming a zigzag chain along the c axis. Aromatic π-π inter-actions between inversion-related pyridine rings [centroid-centroid distance = 3.803 (6) Å] are also observed.Entities:
Year: 2012 PMID: 22590331 PMCID: PMC3344569 DOI: 10.1107/S1600536812016133
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H7N3O4S·C5H5N | |
| Triclinic, | |
| Cu | |
| Cell parameters from 3840 reflections | |
| θ = 3.9–65.7° | |
| α = 102.998 (5)° | µ = 2.16 mm−1 |
| β = 99.037 (5)° | |
| γ = 104.367 (4)° | Rod, colorless |
| 0.20 × 0.15 × 0.10 mm |
| Agilent Xcalibur Onyx Nova diffractometer | 2481 independent reflections |
| Radiation source: Nova (Cu) X-ray Source | 2349 reflections with |
| Mirror monochromator | |
| Detector resolution: 8.2417 pixels mm-1 | θmax = 64.0°, θmin = 3.9° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 4493 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| All H-atom parameters refined | |
| 2481 reflections | (Δ/σ)max = 0.001 |
| 265 parameters | Δρmax = 0.20 e Å−3 |
| 0 restraints | Δρmin = −0.25 e Å−3 |
| Experimental. Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.13956 (5) | 0.44049 (4) | −0.18461 (3) | 0.02193 (13) | |
| O2 | 0.38793 (16) | 0.69194 (12) | −0.07942 (9) | 0.0287 (3) | |
| O4 | −0.09371 (17) | 0.24233 (13) | −0.40776 (9) | 0.0379 (3) | |
| O5 | −0.23353 (17) | 0.06550 (12) | −0.34113 (10) | 0.0375 (3) | |
| N6 | −0.12170 (18) | 0.18630 (14) | −0.32633 (11) | 0.0274 (3) | |
| N7 | 0.31757 (17) | 0.56377 (13) | 0.04990 (11) | 0.0200 (3) | |
| N8 | 0.59845 (19) | 0.69146 (13) | 0.49121 (11) | 0.0275 (3) | |
| C9 | 0.5749 (2) | 0.80811 (15) | 0.24522 (13) | 0.0208 (3) | |
| C10 | 0.5468 (2) | 0.80762 (15) | 0.12457 (12) | 0.0201 (3) | |
| N11 | 0.09847 (18) | 0.33048 (13) | −0.00698 (11) | 0.0225 (3) | |
| C12 | 0.4136 (2) | 0.68695 (15) | 0.02405 (12) | 0.0208 (3) | |
| C13 | −0.0197 (2) | 0.22865 (17) | −0.10729 (14) | 0.0241 (3) | |
| C14 | −0.0158 (2) | 0.26888 (16) | −0.20893 (13) | 0.0230 (3) | |
| C15 | 0.8152 (2) | 1.04417 (17) | 0.29859 (14) | 0.0290 (4) | |
| C16 | 0.1899 (2) | 0.44557 (15) | −0.03509 (12) | 0.0196 (3) | |
| C17 | 0.7287 (2) | 0.61931 (18) | 0.51622 (16) | 0.0344 (4) | |
| C18 | 0.5727 (3) | 0.7465 (2) | 0.69334 (16) | 0.0470 (5) | |
| C19 | 0.6541 (2) | 0.92756 (16) | 0.09458 (14) | 0.0252 (3) | |
| C20 | 0.7871 (2) | 1.04502 (17) | 0.17969 (15) | 0.0296 (4) | |
| C21 | 0.5227 (3) | 0.75377 (18) | 0.57844 (15) | 0.0354 (4) | |
| C22 | 0.7067 (3) | 0.6728 (2) | 0.71945 (17) | 0.0518 (6) | |
| C23 | 0.7866 (3) | 0.6082 (2) | 0.6301 (2) | 0.0489 (5) | |
| C24 | 0.7100 (2) | 0.92842 (16) | 0.33129 (14) | 0.0251 (3) | |
| O1 | 0.47188 (15) | 0.69476 (11) | 0.27650 (9) | 0.0237 (2) | |
| H19 | 0.631 (3) | 0.9235 (18) | 0.0134 (17) | 0.029 (4)* | |
| H24 | 0.725 (3) | 0.9313 (19) | 0.4158 (17) | 0.032 (4)* | |
| H20 | 0.857 (3) | 1.127 (2) | 0.1564 (17) | 0.040 (5)* | |
| H13 | −0.093 (3) | 0.138 (2) | −0.1026 (15) | 0.028 (4)* | |
| H15 | 0.906 (3) | 1.122 (2) | 0.3591 (17) | 0.035 (5)* | |
| H7 | 0.332 (3) | 0.561 (2) | 0.1221 (18) | 0.033 (5)* | |
| H17 | 0.779 (3) | 0.575 (2) | 0.4501 (18) | 0.040 (5)* | |
| H21 | 0.427 (3) | 0.805 (2) | 0.5559 (19) | 0.052 (6)* | |
| H22 | 0.739 (4) | 0.670 (3) | 0.799 (2) | 0.075 (7)* | |
| H18 | 0.514 (4) | 0.800 (3) | 0.762 (2) | 0.068 (7)* | |
| H23 | 0.877 (3) | 0.558 (2) | 0.641 (2) | 0.056 (6)* | |
| H25 | 0.525 (4) | 0.698 (3) | 0.355 (2) | 0.073 (8)* |
| S1 | 0.0230 (2) | 0.0258 (2) | 0.01336 (19) | 0.00558 (15) | 0.00094 (14) | 0.00226 (14) |
| O2 | 0.0343 (6) | 0.0325 (6) | 0.0151 (5) | 0.0044 (5) | 0.0018 (4) | 0.0073 (4) |
| O4 | 0.0353 (6) | 0.0502 (7) | 0.0181 (6) | 0.0042 (5) | 0.0012 (5) | 0.0023 (5) |
| O5 | 0.0310 (6) | 0.0309 (6) | 0.0347 (7) | −0.0005 (5) | −0.0007 (5) | −0.0057 (5) |
| N6 | 0.0209 (6) | 0.0329 (8) | 0.0206 (7) | 0.0062 (6) | 0.0005 (5) | −0.0030 (6) |
| N7 | 0.0223 (6) | 0.0237 (6) | 0.0121 (6) | 0.0062 (5) | 0.0014 (5) | 0.0033 (5) |
| N8 | 0.0310 (7) | 0.0258 (7) | 0.0186 (6) | −0.0012 (5) | 0.0002 (5) | 0.0063 (5) |
| C9 | 0.0200 (7) | 0.0237 (7) | 0.0195 (7) | 0.0088 (6) | 0.0045 (6) | 0.0049 (6) |
| C10 | 0.0200 (7) | 0.0232 (7) | 0.0176 (7) | 0.0096 (6) | 0.0037 (6) | 0.0035 (6) |
| N11 | 0.0227 (6) | 0.0238 (6) | 0.0200 (6) | 0.0071 (5) | 0.0034 (5) | 0.0044 (5) |
| C12 | 0.0194 (7) | 0.0249 (8) | 0.0186 (7) | 0.0086 (6) | 0.0038 (6) | 0.0051 (6) |
| C13 | 0.0208 (7) | 0.0237 (8) | 0.0249 (8) | 0.0062 (6) | 0.0032 (6) | 0.0027 (6) |
| C14 | 0.0192 (7) | 0.0255 (8) | 0.0197 (7) | 0.0064 (6) | 0.0010 (6) | −0.0006 (6) |
| C15 | 0.0291 (8) | 0.0231 (8) | 0.0263 (8) | 0.0031 (7) | 0.0008 (7) | −0.0009 (7) |
| C16 | 0.0186 (7) | 0.0247 (7) | 0.0158 (7) | 0.0097 (6) | 0.0031 (5) | 0.0030 (6) |
| C17 | 0.0292 (8) | 0.0318 (9) | 0.0379 (10) | 0.0005 (7) | 0.0043 (7) | 0.0128 (8) |
| C18 | 0.0652 (13) | 0.0402 (10) | 0.0225 (9) | −0.0032 (9) | 0.0079 (9) | 0.0052 (8) |
| C19 | 0.0273 (8) | 0.0267 (8) | 0.0220 (8) | 0.0086 (6) | 0.0044 (6) | 0.0078 (6) |
| C20 | 0.0320 (8) | 0.0247 (8) | 0.0300 (9) | 0.0047 (7) | 0.0058 (7) | 0.0084 (7) |
| C21 | 0.0433 (10) | 0.0320 (9) | 0.0248 (9) | 0.0046 (8) | 0.0050 (7) | 0.0047 (7) |
| C22 | 0.0655 (13) | 0.0449 (11) | 0.0231 (10) | −0.0172 (10) | −0.0096 (9) | 0.0168 (9) |
| C23 | 0.0374 (10) | 0.0422 (11) | 0.0595 (14) | −0.0019 (9) | −0.0110 (9) | 0.0292 (10) |
| C24 | 0.0268 (8) | 0.0264 (8) | 0.0187 (8) | 0.0074 (6) | 0.0022 (6) | 0.0018 (6) |
| O1 | 0.0269 (5) | 0.0253 (6) | 0.0146 (5) | 0.0025 (4) | 0.0018 (4) | 0.0048 (4) |
| S1—C14 | 1.7269 (15) | C13—H13 | 0.944 (18) |
| S1—C16 | 1.7363 (14) | C15—C20 | 1.393 (2) |
| O2—C12 | 1.2240 (18) | C15—C24 | 1.382 (2) |
| O4—N6 | 1.2381 (17) | C15—H15 | 0.94 (2) |
| O5—N6 | 1.2265 (18) | C17—C23 | 1.383 (3) |
| N6—C14 | 1.4217 (19) | C17—H17 | 0.97 (2) |
| N7—C12 | 1.3775 (19) | C18—C21 | 1.373 (3) |
| N7—C16 | 1.3684 (19) | C18—C22 | 1.369 (3) |
| N7—H7 | 0.85 (2) | C18—H18 | 1.06 (2) |
| N8—C17 | 1.334 (2) | C19—C20 | 1.377 (2) |
| N8—C21 | 1.335 (2) | C19—H19 | 0.939 (18) |
| C9—C10 | 1.410 (2) | C20—H20 | 0.97 (2) |
| C9—C24 | 1.403 (2) | C21—H21 | 0.98 (2) |
| C9—O1 | 1.3483 (18) | C22—C23 | 1.381 (3) |
| C10—C12 | 1.481 (2) | C22—H22 | 0.94 (3) |
| C10—C19 | 1.403 (2) | C23—H23 | 0.92 (2) |
| N11—C13 | 1.365 (2) | C24—H24 | 0.983 (19) |
| N11—C16 | 1.3148 (19) | O1—H25 | 0.93 (3) |
| C13—C14 | 1.355 (2) | ||
| C14—S1—C16 | 86.32 (7) | N11—C16—S1 | 116.83 (11) |
| O4—N6—C14 | 116.98 (13) | N11—C16—N7 | 121.36 (13) |
| O5—N6—O4 | 124.16 (13) | N8—C17—C23 | 121.43 (18) |
| O5—N6—C14 | 118.86 (13) | N8—C17—H17 | 116.3 (11) |
| C12—N7—H7 | 119.5 (13) | C23—C17—H17 | 122.3 (11) |
| C16—N7—C12 | 123.00 (12) | C21—C18—H18 | 121.1 (13) |
| C16—N7—H7 | 117.4 (13) | C22—C18—C21 | 118.52 (19) |
| C17—N8—C21 | 118.94 (14) | C22—C18—H18 | 120.4 (13) |
| C24—C9—C10 | 118.84 (13) | C10—C19—H19 | 116.6 (11) |
| O1—C9—C10 | 120.13 (13) | C20—C19—C10 | 121.77 (14) |
| O1—C9—C24 | 121.02 (13) | C20—C19—H19 | 121.6 (11) |
| C9—C10—C12 | 124.80 (13) | C15—C20—H20 | 121.2 (11) |
| C19—C10—C9 | 118.97 (13) | C19—C20—C15 | 118.89 (15) |
| C19—C10—C12 | 116.22 (13) | C19—C20—H20 | 119.8 (11) |
| C16—N11—C13 | 109.77 (12) | N8—C21—C18 | 122.73 (18) |
| O2—C12—N7 | 119.41 (13) | N8—C21—H21 | 116.0 (13) |
| O2—C12—C10 | 123.02 (13) | C18—C21—H21 | 121.2 (13) |
| N7—C12—C10 | 117.56 (12) | C18—C22—C23 | 119.32 (17) |
| N11—C13—H13 | 120.4 (11) | C18—C22—H22 | 116.7 (16) |
| C14—C13—N11 | 114.35 (14) | C23—C22—H22 | 124.0 (16) |
| C14—C13—H13 | 125.2 (11) | C17—C23—H23 | 116.4 (15) |
| N6—C14—S1 | 120.07 (11) | C22—C23—C17 | 119.06 (19) |
| C13—C14—S1 | 112.72 (11) | C22—C23—H23 | 124.5 (15) |
| C13—C14—N6 | 127.21 (14) | C9—C24—H24 | 119.1 (11) |
| C20—C15—H15 | 121.3 (11) | C15—C24—C9 | 120.72 (14) |
| C24—C15—C20 | 120.79 (15) | C15—C24—H24 | 120.1 (11) |
| C24—C15—H15 | 117.9 (11) | C9—O1—H25 | 111.8 (16) |
| N7—C16—S1 | 121.81 (11) |
| H··· | ||||
| N7—H7···O1 | 0.85 (2) | 1.95 (2) | 2.6248 (16) | 135.9 (18) |
| O1—H25···N8 | 0.94 (2) | 1.64 (2) | 2.5671 (16) | 175 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N7—H7⋯O1 | 0.85 (2) | 1.95 (2) | 2.6248 (16) | 135.9 (18) |
| O1—H25⋯N8 | 0.94 (2) | 1.64 (2) | 2.5671 (16) | 175 (3) |