| Literature DB >> 22590329 |
De-Cai Wang1, Jiang-Kai Qiu, Hai-Xi Zhu, Ping Wei, Ping-Kai Ou-Yang.
Abstract
In the title compound, C(12)H(9)F(3)N(2)O(2), the benzene ring is nearly perpendicular to the isoxazole ring, making a dihedral angle of 82.97 (2)°. In the crystal, mol-ecules are linked by N-H⋯O hydrogen bonds into a supra-molecular chain running along the c axis.Entities:
Year: 2012 PMID: 22590329 PMCID: PMC3344567 DOI: 10.1107/S1600536812016467
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H9F3N2O2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
| θ = 9–13° | |
| µ = 0.13 mm−1 | |
| β = 101.29 (3)° | Block, colorless |
| 0.20 × 0.10 × 0.10 mm | |
| Enref–Nonius CAD-4 diffractometer | 1125 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 25.2°, θmin = 1.3° |
| ω/2θ scans | |
| Absorption correction: ψ scan (North | |
| 2193 measured reflections | 3 standard reflections every 200 reflections |
| 2193 independent reflections | intensity decay: 1% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2193 reflections | (Δ/σ)max < 0.001 |
| 172 parameters | Δρmax = 0.19 e Å−3 |
| 0 restraints | Δρmin = −0.19 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| N1 | 0.73554 (18) | 0.2300 (3) | 0.9712 (3) | 0.0540 (8) | |
| H1A | 0.7386 | 0.2533 | 1.0610 | 0.065* | |
| O1 | 0.67807 (16) | 0.2925 (3) | 0.7394 (2) | 0.0647 (8) | |
| F1 | 0.9108 (2) | 0.3541 (4) | 1.0116 (3) | 0.1322 (13) | |
| C1 | 0.9018 (3) | −0.0106 (6) | 0.8447 (4) | 0.0732 (12) | |
| H1B | 0.9526 | 0.0039 | 0.8108 | 0.088* | |
| O2 | 0.55089 (19) | 0.6534 (3) | 0.9342 (3) | 0.0782 (9) | |
| N2 | 0.6083 (3) | 0.6480 (4) | 1.0694 (4) | 0.0790 (11) | |
| F2 | 0.97802 (18) | 0.2773 (4) | 0.8551 (4) | 0.1233 (11) | |
| C2 | 0.8701 (3) | −0.1615 (6) | 0.8525 (5) | 0.0844 (14) | |
| H2B | 0.8989 | −0.2489 | 0.8232 | 0.101* | |
| F3 | 0.85728 (19) | 0.3827 (3) | 0.7915 (3) | 0.1128 (10) | |
| C3 | 0.7957 (3) | −0.1853 (5) | 0.9035 (5) | 0.0805 (13) | |
| H3A | 0.7746 | −0.2886 | 0.9103 | 0.097* | |
| C4 | 0.7526 (3) | −0.0551 (5) | 0.9447 (4) | 0.0650 (11) | |
| H4A | 0.7023 | −0.0707 | 0.9797 | 0.078* | |
| C5 | 0.7837 (2) | 0.0983 (4) | 0.9344 (3) | 0.0512 (9) | |
| C6 | 0.8601 (2) | 0.1205 (5) | 0.8858 (4) | 0.0574 (10) | |
| C7 | 0.9005 (3) | 0.2832 (5) | 0.8849 (5) | 0.0680 (11) | |
| C8 | 0.6852 (2) | 0.3198 (4) | 0.8696 (4) | 0.0486 (9) | |
| C9 | 0.6396 (2) | 0.4541 (4) | 0.9236 (4) | 0.0488 (9) | |
| C10 | 0.5722 (3) | 0.5371 (5) | 0.8487 (4) | 0.0589 (10) | |
| C11 | 0.6589 (3) | 0.5281 (5) | 1.0597 (4) | 0.0641 (11) | |
| H11A | 0.7029 | 0.4948 | 1.1343 | 0.077* | |
| C12 | 0.5197 (3) | 0.5268 (5) | 0.7026 (4) | 0.0761 (12) | |
| H12A | 0.4770 | 0.6101 | 0.6897 | 0.114* | |
| H12B | 0.4919 | 0.4240 | 0.6897 | 0.114* | |
| H12C | 0.5559 | 0.5397 | 0.6327 | 0.114* |
| N1 | 0.066 (2) | 0.0617 (19) | 0.0402 (15) | 0.0153 (17) | 0.0235 (14) | 0.0065 (15) |
| O1 | 0.0783 (18) | 0.0810 (19) | 0.0400 (13) | 0.0171 (15) | 0.0239 (12) | −0.0014 (13) |
| F1 | 0.172 (3) | 0.127 (3) | 0.112 (2) | −0.071 (2) | 0.062 (2) | −0.0454 (19) |
| C1 | 0.064 (3) | 0.081 (3) | 0.083 (3) | 0.013 (2) | 0.035 (2) | 0.003 (2) |
| O2 | 0.093 (2) | 0.0569 (17) | 0.094 (2) | 0.0188 (16) | 0.0402 (19) | 0.0020 (16) |
| N2 | 0.111 (3) | 0.063 (2) | 0.069 (2) | 0.010 (2) | 0.035 (2) | −0.0060 (19) |
| F2 | 0.0791 (18) | 0.124 (2) | 0.182 (3) | −0.0192 (18) | 0.0619 (19) | 0.010 (2) |
| C2 | 0.091 (3) | 0.071 (3) | 0.100 (4) | 0.022 (3) | 0.040 (3) | 0.003 (3) |
| F3 | 0.108 (2) | 0.087 (2) | 0.135 (3) | −0.0171 (17) | 0.0032 (18) | 0.0453 (18) |
| C3 | 0.097 (3) | 0.049 (3) | 0.102 (3) | 0.003 (2) | 0.034 (3) | 0.014 (2) |
| C4 | 0.065 (3) | 0.068 (3) | 0.070 (3) | −0.001 (2) | 0.033 (2) | 0.015 (2) |
| C5 | 0.059 (2) | 0.054 (2) | 0.045 (2) | 0.0066 (19) | 0.0234 (18) | 0.0067 (16) |
| C6 | 0.058 (2) | 0.069 (3) | 0.050 (2) | 0.006 (2) | 0.0218 (18) | 0.0051 (19) |
| C7 | 0.065 (3) | 0.075 (3) | 0.071 (3) | 0.000 (2) | 0.033 (2) | 0.004 (2) |
| C8 | 0.050 (2) | 0.049 (2) | 0.052 (2) | 0.0024 (18) | 0.0254 (17) | 0.0047 (17) |
| C9 | 0.061 (2) | 0.044 (2) | 0.0470 (19) | −0.0004 (18) | 0.0261 (17) | 0.0010 (17) |
| C10 | 0.064 (3) | 0.049 (2) | 0.070 (2) | −0.004 (2) | 0.030 (2) | 0.004 (2) |
| C11 | 0.091 (3) | 0.056 (2) | 0.051 (2) | 0.003 (2) | 0.026 (2) | 0.0006 (19) |
| C12 | 0.076 (3) | 0.072 (3) | 0.081 (3) | −0.001 (2) | 0.017 (2) | 0.015 (2) |
| N1—C8 | 1.346 (4) | C3—C4 | 1.377 (5) |
| N1—C5 | 1.417 (4) | C3—H3A | 0.9300 |
| N1—H1A | 0.8600 | C4—C5 | 1.379 (5) |
| O1—C8 | 1.231 (4) | C4—H4A | 0.9300 |
| F1—C7 | 1.314 (4) | C5—C6 | 1.387 (4) |
| C1—C2 | 1.361 (6) | C6—C7 | 1.499 (5) |
| C1—C6 | 1.370 (5) | C8—C9 | 1.475 (4) |
| C1—H1B | 0.9300 | C9—C10 | 1.350 (5) |
| O2—C10 | 1.345 (4) | C9—C11 | 1.401 (5) |
| O2—N2 | 1.415 (4) | C10—C12 | 1.465 (5) |
| N2—C11 | 1.295 (5) | C11—H11A | 0.9300 |
| F2—C7 | 1.312 (4) | C12—H12A | 0.9600 |
| C2—C3 | 1.370 (6) | C12—H12B | 0.9600 |
| C2—H2B | 0.9300 | C12—H12C | 0.9600 |
| F3—C7 | 1.302 (5) | ||
| C8—N1—C5 | 121.8 (3) | F3—C7—F1 | 106.5 (4) |
| C8—N1—H1A | 119.1 | F2—C7—F1 | 104.9 (4) |
| C5—N1—H1A | 119.1 | F3—C7—C6 | 114.2 (4) |
| C2—C1—C6 | 121.1 (4) | F2—C7—C6 | 112.7 (4) |
| C2—C1—H1B | 119.5 | F1—C7—C6 | 112.2 (3) |
| C6—C1—H1B | 119.5 | O1—C8—N1 | 122.2 (3) |
| C10—O2—N2 | 108.9 (3) | O1—C8—C9 | 121.8 (3) |
| C11—N2—O2 | 105.0 (3) | N1—C8—C9 | 115.9 (3) |
| C1—C2—C3 | 120.3 (4) | C10—C9—C11 | 105.2 (3) |
| C1—C2—H2B | 119.9 | C10—C9—C8 | 126.8 (3) |
| C3—C2—H2B | 119.9 | C11—C9—C8 | 128.0 (4) |
| C2—C3—C4 | 119.5 (4) | O2—C10—C9 | 108.7 (3) |
| C2—C3—H3A | 120.3 | O2—C10—C12 | 116.3 (4) |
| C4—C3—H3A | 120.3 | C9—C10—C12 | 135.0 (4) |
| C3—C4—C5 | 120.4 (3) | N2—C11—C9 | 112.2 (4) |
| C3—C4—H4A | 119.8 | N2—C11—H11A | 123.9 |
| C5—C4—H4A | 119.8 | C9—C11—H11A | 123.9 |
| C4—C5—C6 | 119.5 (3) | C10—C12—H12A | 109.5 |
| C4—C5—N1 | 118.9 (3) | C10—C12—H12B | 109.5 |
| C6—C5—N1 | 121.6 (3) | H12A—C12—H12B | 109.5 |
| C1—C6—C5 | 119.2 (4) | C10—C12—H12C | 109.5 |
| C1—C6—C7 | 119.2 (3) | H12A—C12—H12C | 109.5 |
| C5—C6—C7 | 121.6 (3) | H12B—C12—H12C | 109.5 |
| F3—C7—F2 | 105.6 (3) | ||
| C10—O2—N2—C11 | −1.6 (4) | C1—C6—C7—F1 | −123.8 (4) |
| C6—C1—C2—C3 | −0.7 (7) | C5—C6—C7—F1 | 52.7 (5) |
| C1—C2—C3—C4 | 1.0 (7) | C5—N1—C8—O1 | 0.1 (5) |
| C2—C3—C4—C5 | 0.2 (6) | C5—N1—C8—C9 | −179.3 (3) |
| C3—C4—C5—C6 | −1.7 (6) | O1—C8—C9—C10 | 16.6 (5) |
| C3—C4—C5—N1 | 177.1 (4) | N1—C8—C9—C10 | −163.9 (3) |
| C8—N1—C5—C4 | −100.9 (4) | O1—C8—C9—C11 | −160.1 (3) |
| C8—N1—C5—C6 | 77.9 (4) | N1—C8—C9—C11 | 19.4 (5) |
| C2—C1—C6—C5 | −0.8 (6) | N2—O2—C10—C9 | 1.4 (4) |
| C2—C1—C6—C7 | 175.8 (4) | N2—O2—C10—C12 | −179.2 (3) |
| C4—C5—C6—C1 | 2.0 (5) | C11—C9—C10—O2 | −0.7 (4) |
| N1—C5—C6—C1 | −176.7 (3) | C8—C9—C10—O2 | −177.9 (3) |
| C4—C5—C6—C7 | −174.5 (4) | C11—C9—C10—C12 | −180.0 (4) |
| N1—C5—C6—C7 | 6.7 (5) | C8—C9—C10—C12 | 2.8 (6) |
| C1—C6—C7—F3 | 114.9 (4) | O2—N2—C11—C9 | 1.2 (4) |
| C5—C6—C7—F3 | −68.6 (5) | C10—C9—C11—N2 | −0.4 (4) |
| C1—C6—C7—F2 | −5.7 (6) | C8—C9—C11—N2 | 176.9 (3) |
| C5—C6—C7—F2 | 170.9 (4) |
| H··· | ||||
| N1—H1 | 0.86 | 2.13 | 2.855 (3) | 142 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.86 | 2.13 | 2.855 (3) | 142 |
Symmetry code: (i) .