Literature DB >> 22590329

5-Methyl-N-[2-(trifluoro-meth-yl)phen-yl]isoxazole-4-carboxamide.

De-Cai Wang1, Jiang-Kai Qiu, Hai-Xi Zhu, Ping Wei, Ping-Kai Ou-Yang.   

Abstract

In the title compound, C(12)H(9)F(3)N(2)O(2), the benzene ring is nearly perpendicular to the isoxazole ring, making a dihedral angle of 82.97 (2)°. In the crystal, mol-ecules are linked by N-H⋯O hydrogen bonds into a supra-molecular chain running along the c axis.

Entities:  

Year:  2012        PMID: 22590329      PMCID: PMC3344567          DOI: 10.1107/S1600536812016467

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of leflunomide [systematic name: 5-methyl-N-[4-(trifluoro­meth­yl) phen­yl]-isoxazole-4-carboxamide] in the treatment of rheumatoid arthritis, see: Shaw et al. (2011 ▶); Schattenkirchner (2000 ▶). For leflunomide analogs, see: Huang et al. (2003 ▶); Wang et al. (2011 ▶).

Experimental

Crystal data

C12H9F3N2O2 M = 270.21 Monoclinic, a = 15.839 (3) Å b = 8.3260 (17) Å c = 9.4250 (19) Å β = 101.29 (3)° V = 1218.9 (4) Å3 Z = 4 Mo Kα radiation μ = 0.13 mm−1 T = 293 K 0.20 × 0.10 × 0.10 mm

Data collection

Enref–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.974, T max = 0.987 2193 measured reflections 2193 independent reflections 1125 reflections with I > 2σ(I) 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.062 wR(F 2) = 0.164 S = 1.00 2193 reflections 172 parameters H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.19 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo,1995 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812016467/xu5516sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812016467/xu5516Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812016467/xu5516Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H9F3N2O2F(000) = 552
Mr = 270.21Dx = 1.472 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 15.839 (3) Åθ = 9–13°
b = 8.3260 (17) ŵ = 0.13 mm1
c = 9.4250 (19) ÅT = 293 K
β = 101.29 (3)°Block, colorless
V = 1218.9 (4) Å30.20 × 0.10 × 0.10 mm
Z = 4
Enref–Nonius CAD-4 diffractometer1125 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.000
Graphite monochromatorθmax = 25.2°, θmin = 1.3°
ω/2θ scansh = −18→18
Absorption correction: ψ scan (North et al., 1968)k = 0→9
Tmin = 0.974, Tmax = 0.987l = 0→11
2193 measured reflections3 standard reflections every 200 reflections
2193 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.062Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.164H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.068P)2] where P = (Fo2 + 2Fc2)/3
2193 reflections(Δ/σ)max < 0.001
172 parametersΔρmax = 0.19 e Å3
0 restraintsΔρmin = −0.19 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.73554 (18)0.2300 (3)0.9712 (3)0.0540 (8)
H1A0.73860.25331.06100.065*
O10.67807 (16)0.2925 (3)0.7394 (2)0.0647 (8)
F10.9108 (2)0.3541 (4)1.0116 (3)0.1322 (13)
C10.9018 (3)−0.0106 (6)0.8447 (4)0.0732 (12)
H1B0.95260.00390.81080.088*
O20.55089 (19)0.6534 (3)0.9342 (3)0.0782 (9)
N20.6083 (3)0.6480 (4)1.0694 (4)0.0790 (11)
F20.97802 (18)0.2773 (4)0.8551 (4)0.1233 (11)
C20.8701 (3)−0.1615 (6)0.8525 (5)0.0844 (14)
H2B0.8989−0.24890.82320.101*
F30.85728 (19)0.3827 (3)0.7915 (3)0.1128 (10)
C30.7957 (3)−0.1853 (5)0.9035 (5)0.0805 (13)
H3A0.7746−0.28860.91030.097*
C40.7526 (3)−0.0551 (5)0.9447 (4)0.0650 (11)
H4A0.7023−0.07070.97970.078*
C50.7837 (2)0.0983 (4)0.9344 (3)0.0512 (9)
C60.8601 (2)0.1205 (5)0.8858 (4)0.0574 (10)
C70.9005 (3)0.2832 (5)0.8849 (5)0.0680 (11)
C80.6852 (2)0.3198 (4)0.8696 (4)0.0486 (9)
C90.6396 (2)0.4541 (4)0.9236 (4)0.0488 (9)
C100.5722 (3)0.5371 (5)0.8487 (4)0.0589 (10)
C110.6589 (3)0.5281 (5)1.0597 (4)0.0641 (11)
H11A0.70290.49481.13430.077*
C120.5197 (3)0.5268 (5)0.7026 (4)0.0761 (12)
H12A0.47700.61010.68970.114*
H12B0.49190.42400.68970.114*
H12C0.55590.53970.63270.114*
U11U22U33U12U13U23
N10.066 (2)0.0617 (19)0.0402 (15)0.0153 (17)0.0235 (14)0.0065 (15)
O10.0783 (18)0.0810 (19)0.0400 (13)0.0171 (15)0.0239 (12)−0.0014 (13)
F10.172 (3)0.127 (3)0.112 (2)−0.071 (2)0.062 (2)−0.0454 (19)
C10.064 (3)0.081 (3)0.083 (3)0.013 (2)0.035 (2)0.003 (2)
O20.093 (2)0.0569 (17)0.094 (2)0.0188 (16)0.0402 (19)0.0020 (16)
N20.111 (3)0.063 (2)0.069 (2)0.010 (2)0.035 (2)−0.0060 (19)
F20.0791 (18)0.124 (2)0.182 (3)−0.0192 (18)0.0619 (19)0.010 (2)
C20.091 (3)0.071 (3)0.100 (4)0.022 (3)0.040 (3)0.003 (3)
F30.108 (2)0.087 (2)0.135 (3)−0.0171 (17)0.0032 (18)0.0453 (18)
C30.097 (3)0.049 (3)0.102 (3)0.003 (2)0.034 (3)0.014 (2)
C40.065 (3)0.068 (3)0.070 (3)−0.001 (2)0.033 (2)0.015 (2)
C50.059 (2)0.054 (2)0.045 (2)0.0066 (19)0.0234 (18)0.0067 (16)
C60.058 (2)0.069 (3)0.050 (2)0.006 (2)0.0218 (18)0.0051 (19)
C70.065 (3)0.075 (3)0.071 (3)0.000 (2)0.033 (2)0.004 (2)
C80.050 (2)0.049 (2)0.052 (2)0.0024 (18)0.0254 (17)0.0047 (17)
C90.061 (2)0.044 (2)0.0470 (19)−0.0004 (18)0.0261 (17)0.0010 (17)
C100.064 (3)0.049 (2)0.070 (2)−0.004 (2)0.030 (2)0.004 (2)
C110.091 (3)0.056 (2)0.051 (2)0.003 (2)0.026 (2)0.0006 (19)
C120.076 (3)0.072 (3)0.081 (3)−0.001 (2)0.017 (2)0.015 (2)
N1—C81.346 (4)C3—C41.377 (5)
N1—C51.417 (4)C3—H3A0.9300
N1—H1A0.8600C4—C51.379 (5)
O1—C81.231 (4)C4—H4A0.9300
F1—C71.314 (4)C5—C61.387 (4)
C1—C21.361 (6)C6—C71.499 (5)
C1—C61.370 (5)C8—C91.475 (4)
C1—H1B0.9300C9—C101.350 (5)
O2—C101.345 (4)C9—C111.401 (5)
O2—N21.415 (4)C10—C121.465 (5)
N2—C111.295 (5)C11—H11A0.9300
F2—C71.312 (4)C12—H12A0.9600
C2—C31.370 (6)C12—H12B0.9600
C2—H2B0.9300C12—H12C0.9600
F3—C71.302 (5)
C8—N1—C5121.8 (3)F3—C7—F1106.5 (4)
C8—N1—H1A119.1F2—C7—F1104.9 (4)
C5—N1—H1A119.1F3—C7—C6114.2 (4)
C2—C1—C6121.1 (4)F2—C7—C6112.7 (4)
C2—C1—H1B119.5F1—C7—C6112.2 (3)
C6—C1—H1B119.5O1—C8—N1122.2 (3)
C10—O2—N2108.9 (3)O1—C8—C9121.8 (3)
C11—N2—O2105.0 (3)N1—C8—C9115.9 (3)
C1—C2—C3120.3 (4)C10—C9—C11105.2 (3)
C1—C2—H2B119.9C10—C9—C8126.8 (3)
C3—C2—H2B119.9C11—C9—C8128.0 (4)
C2—C3—C4119.5 (4)O2—C10—C9108.7 (3)
C2—C3—H3A120.3O2—C10—C12116.3 (4)
C4—C3—H3A120.3C9—C10—C12135.0 (4)
C3—C4—C5120.4 (3)N2—C11—C9112.2 (4)
C3—C4—H4A119.8N2—C11—H11A123.9
C5—C4—H4A119.8C9—C11—H11A123.9
C4—C5—C6119.5 (3)C10—C12—H12A109.5
C4—C5—N1118.9 (3)C10—C12—H12B109.5
C6—C5—N1121.6 (3)H12A—C12—H12B109.5
C1—C6—C5119.2 (4)C10—C12—H12C109.5
C1—C6—C7119.2 (3)H12A—C12—H12C109.5
C5—C6—C7121.6 (3)H12B—C12—H12C109.5
F3—C7—F2105.6 (3)
C10—O2—N2—C11−1.6 (4)C1—C6—C7—F1−123.8 (4)
C6—C1—C2—C3−0.7 (7)C5—C6—C7—F152.7 (5)
C1—C2—C3—C41.0 (7)C5—N1—C8—O10.1 (5)
C2—C3—C4—C50.2 (6)C5—N1—C8—C9−179.3 (3)
C3—C4—C5—C6−1.7 (6)O1—C8—C9—C1016.6 (5)
C3—C4—C5—N1177.1 (4)N1—C8—C9—C10−163.9 (3)
C8—N1—C5—C4−100.9 (4)O1—C8—C9—C11−160.1 (3)
C8—N1—C5—C677.9 (4)N1—C8—C9—C1119.4 (5)
C2—C1—C6—C5−0.8 (6)N2—O2—C10—C91.4 (4)
C2—C1—C6—C7175.8 (4)N2—O2—C10—C12−179.2 (3)
C4—C5—C6—C12.0 (5)C11—C9—C10—O2−0.7 (4)
N1—C5—C6—C1−176.7 (3)C8—C9—C10—O2−177.9 (3)
C4—C5—C6—C7−174.5 (4)C11—C9—C10—C12−180.0 (4)
N1—C5—C6—C76.7 (5)C8—C9—C10—C122.8 (6)
C1—C6—C7—F3114.9 (4)O2—N2—C11—C91.2 (4)
C5—C6—C7—F3−68.6 (5)C10—C9—C11—N2−0.4 (4)
C1—C6—C7—F2−5.7 (6)C8—C9—C11—N2176.9 (3)
C5—C6—C7—F2170.9 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O1i0.862.132.855 (3)142
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O1i0.862.132.855 (3)142

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  The use of leflunomide in the treatment of rheumatoid arthritis: an experimental and clinical review.

Authors:  M Schattenkirchner
Journal:  Immunopharmacology       Date:  2000-05

3.  Leflunomide analogues as potential antiinflammatory agents.

Authors:  Wen-Hsin Huang; Chiao-Li Yang; An-Rong Lee; Hui-Fen Chiu
Journal:  Chem Pharm Bull (Tokyo)       Date:  2003-03       Impact factor: 1.645

4.  N-(4-Chloro-2-nitro-phen-yl)-5-methyl-isoxazole-4-carboxamide.

Authors:  De-Cai Wang; Liang-Cheng Huang; Zhu-Yun Liu; Ping Wei; Ping-Kai Ou-Yang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-16
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.