Literature DB >> 22199828

N-(4-Chloro-2-nitro-phen-yl)-5-methyl-isoxazole-4-carboxamide.

De-Cai Wang1, Liang-Cheng Huang, Zhu-Yun Liu, Ping Wei, Ping-Kai Ou-Yang.   

Abstract

In the title compound, C(11)H(8)ClN(3)O(4), the dihedral angle between benzene and isoxazole rings is 9.92 (1) °. The nitro group is almost coplanar with the benzene ring with an O-N-C-C torsion angle of 8.4 (3)°. The mol-ecular conformation is stabilized by an intra-molecular N-H⋯O hydrogen bond, closing a six-membered ring.

Entities:  

Year:  2011        PMID: 22199828      PMCID: PMC3238979          DOI: 10.1107/S1600536811047994

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of leflunomide [systematic name: 5-methyl-N-[4-(trifluoro­meth­yl) phen­yl]-isoxazole-4-carboxamide] in the treatment of rheumatoid arthritis, see: Shaw et al. (2011 ▶); Schattenkirchner (2000 ▶). The title compound was synthesized as an immunomodulating leflunomide analog; for another immunomodulating leflunomide analog, see: Huang et al. (2003 ▶).

Experimental

Crystal data

C11H8ClN3O4 M = 281.65 Monoclinic, a = 5.3870 (11) Å b = 23.537 (5) Å c = 9.4600 (19) Å β = 99.86 (3)° V = 1181.8 (4) Å3 Z = 4 Mo Kα radiation μ = 0.34 mm−1 T = 293 K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.905, T max = 0.967 4645 measured reflections 2121 independent reflections 1558 reflections with I > 2σ(I) R int = 0.044 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.143 S = 1.02 2121 reflections 174 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.22 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811047994/ld2035sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811047994/ld2035Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H8ClN3O4F(000) = 576
Mr = 281.65Dx = 1.583 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 5.3870 (11) Åθ = 9–13°
b = 23.537 (5) ŵ = 0.34 mm1
c = 9.4600 (19) ÅT = 293 K
β = 99.86 (3)°Block, white
V = 1181.8 (4) Å30.30 × 0.20 × 0.10 mm
Z = 4
Enraf–Nonius CAD-4 diffractometer1558 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.044
graphiteθmax = 25.2°, θmin = 1.7°
ω/2θ scansh = 0→6
Absorption correction: ψ scan (North et al., 1968)k = −28→28
Tmin = 0.905, Tmax = 0.967l = −11→11
4645 measured reflections3 standard reflections every 200 reflections
2121 independent reflections intensity decay: 1%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H-atom parameters constrained
wR(F2) = 0.143w = 1/[σ2(Fo2) + (0.090P)2] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
2121 reflectionsΔρmax = 0.18 e Å3
174 parametersΔρmin = −0.22 e Å3
0 restraintsExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.010 (3)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl1.14810 (15)0.27507 (3)0.51209 (9)0.0712 (3)
N10.5249 (4)0.33771 (10)0.8313 (2)0.0534 (6)
C10.8613 (5)0.42551 (11)0.5906 (3)0.0476 (6)
H1A0.87680.46280.56060.057*
O10.5463 (5)0.28905 (9)0.8742 (3)0.0868 (8)
O20.3751 (4)0.37087 (9)0.8716 (2)0.0611 (5)
C20.9988 (5)0.38350 (11)0.5390 (3)0.0507 (6)
H2A1.10700.39270.47570.061*
N20.5564 (4)0.45566 (9)0.7398 (2)0.0469 (5)
H2B0.45590.44400.79510.056*
N30.0876 (5)0.56302 (12)0.9317 (3)0.0656 (7)
O30.6784 (4)0.53680 (8)0.6379 (2)0.0586 (5)
C30.9774 (5)0.32777 (11)0.5806 (3)0.0475 (6)
O40.1878 (4)0.61421 (9)0.8857 (2)0.0658 (6)
C40.8225 (5)0.31427 (11)0.6765 (3)0.0501 (6)
H4A0.80990.27680.70600.060*
C50.6850 (5)0.35645 (10)0.7294 (2)0.0434 (6)
C60.6978 (4)0.41348 (10)0.6875 (2)0.0406 (5)
C70.5541 (5)0.51330 (10)0.7158 (2)0.0433 (6)
C80.3842 (4)0.54381 (11)0.7965 (2)0.0444 (6)
C90.2056 (5)0.52340 (12)0.8774 (3)0.0555 (7)
H9A0.17630.48500.89010.067*
C100.3644 (5)0.60153 (11)0.8058 (3)0.0522 (7)
C110.4990 (7)0.65000 (12)0.7545 (4)0.0731 (9)
H11A0.41810.68480.77370.110*
H11B0.49580.64640.65320.110*
H11C0.67050.65030.80350.110*
U11U22U33U12U13U23
Cl0.0730 (5)0.0583 (5)0.0884 (6)0.0099 (4)0.0308 (4)−0.0103 (4)
N10.0613 (14)0.0467 (13)0.0561 (12)−0.0111 (11)0.0211 (11)0.0031 (10)
C10.0504 (14)0.0448 (14)0.0502 (13)−0.0018 (12)0.0158 (11)0.0077 (11)
O10.121 (2)0.0491 (13)0.1062 (18)−0.0060 (12)0.0648 (16)0.0174 (11)
O20.0612 (12)0.0607 (12)0.0687 (12)−0.0006 (10)0.0320 (10)0.0094 (9)
C20.0515 (15)0.0515 (16)0.0530 (14)−0.0043 (12)0.0199 (12)0.0013 (11)
N20.0524 (12)0.0432 (12)0.0493 (11)−0.0006 (9)0.0210 (10)0.0049 (9)
N30.0568 (14)0.0717 (18)0.0722 (15)0.0055 (12)0.0221 (12)−0.0037 (12)
O30.0713 (13)0.0431 (11)0.0691 (11)−0.0025 (9)0.0335 (10)0.0048 (8)
C30.0449 (13)0.0467 (15)0.0520 (14)0.0003 (11)0.0112 (11)−0.0044 (11)
O40.0620 (12)0.0666 (14)0.0703 (12)0.0135 (10)0.0152 (10)−0.0107 (10)
C40.0541 (15)0.0379 (14)0.0587 (15)−0.0039 (11)0.0107 (13)0.0027 (11)
C50.0434 (13)0.0429 (14)0.0454 (13)−0.0068 (11)0.0123 (11)0.0015 (10)
C60.0430 (13)0.0411 (13)0.0377 (11)−0.0023 (10)0.0069 (10)0.0009 (9)
C70.0459 (13)0.0408 (13)0.0431 (13)−0.0014 (11)0.0069 (11)0.0017 (10)
C80.0433 (13)0.0464 (15)0.0428 (12)0.0017 (11)0.0053 (10)−0.0003 (10)
C90.0513 (15)0.0590 (18)0.0577 (15)−0.0006 (13)0.0140 (13)−0.0033 (13)
C100.0521 (15)0.0536 (16)0.0506 (14)0.0088 (13)0.0080 (12)−0.0030 (12)
C110.089 (2)0.0471 (17)0.086 (2)0.0019 (16)0.0222 (18)−0.0016 (15)
Cl—C31.734 (3)O3—C71.210 (3)
N1—O11.214 (3)C3—C41.371 (4)
N1—O21.230 (3)O4—C101.346 (3)
N1—C51.467 (3)C4—C51.382 (3)
C1—C21.374 (4)C4—H4A0.9300
C1—C61.405 (3)C5—C61.405 (3)
C1—H1A0.9300C7—C81.475 (3)
C2—C31.380 (4)C8—C101.367 (4)
C2—H2A0.9300C8—C91.412 (4)
N2—C71.375 (3)C9—H9A0.9300
N2—C61.393 (3)C10—C111.477 (4)
N2—H2B0.8600C11—H11A0.9600
N3—C91.285 (3)C11—H11B0.9600
N3—O41.419 (3)C11—H11C0.9600
O1—N1—O2121.7 (2)C6—C5—N1122.4 (2)
O1—N1—C5118.0 (2)N2—C6—C1122.0 (2)
O2—N1—C5120.3 (2)N2—C6—C5121.6 (2)
C2—C1—C6121.5 (2)C1—C6—C5116.3 (2)
C2—C1—H1A119.2O3—C7—N2124.1 (2)
C6—C1—H1A119.2O3—C7—C8123.3 (2)
C1—C2—C3120.4 (2)N2—C7—C8112.5 (2)
C1—C2—H2A119.8C10—C8—C9103.6 (2)
C3—C2—H2A119.8C10—C8—C7125.4 (2)
C7—N2—C6129.4 (2)C9—C8—C7131.0 (2)
C7—N2—H2B115.3N3—C9—C8113.6 (3)
C6—N2—H2B115.3N3—C9—H9A123.2
C9—N3—O4104.7 (2)C8—C9—H9A123.2
C4—C3—C2119.9 (2)O4—C10—C8109.1 (2)
C4—C3—Cl120.2 (2)O4—C10—C11116.5 (3)
C2—C3—Cl119.8 (2)C8—C10—C11134.3 (3)
C10—O4—N3109.1 (2)C10—C11—H11A109.5
C3—C4—C5119.8 (2)C10—C11—H11B109.5
C3—C4—H4A120.1H11A—C11—H11B109.5
C5—C4—H4A120.1C10—C11—H11C109.5
C4—C5—C6121.9 (2)H11A—C11—H11C109.5
C4—C5—N1115.7 (2)H11B—C11—H11C109.5
C6—C1—C2—C30.7 (4)C4—C5—C6—C1−1.0 (3)
C1—C2—C3—C4−1.5 (4)N1—C5—C6—C1179.2 (2)
C1—C2—C3—Cl178.87 (19)C6—N2—C7—O32.0 (4)
C9—N3—O4—C10−0.4 (3)C6—N2—C7—C8−177.5 (2)
C2—C3—C4—C51.1 (4)O3—C7—C8—C10−7.0 (4)
Cl—C3—C4—C5−179.31 (19)N2—C7—C8—C10172.5 (2)
C3—C4—C5—C60.2 (4)O3—C7—C8—C9171.5 (2)
C3—C4—C5—N1180.0 (2)N2—C7—C8—C9−8.9 (4)
O1—N1—C5—C48.4 (3)O4—N3—C9—C80.4 (3)
O2—N1—C5—C4−171.8 (2)C10—C8—C9—N3−0.2 (3)
O1—N1—C5—C6−171.8 (2)C7—C8—C9—N3−179.0 (2)
O2—N1—C5—C67.9 (4)N3—O4—C10—C80.3 (3)
C7—N2—C6—C1−3.1 (4)N3—O4—C10—C11−177.0 (2)
C7—N2—C6—C5176.7 (2)C9—C8—C10—O4−0.1 (3)
C2—C1—C6—N2−179.6 (2)C7—C8—C10—O4178.8 (2)
C2—C1—C6—C50.6 (3)C9—C8—C10—C11176.5 (3)
C4—C5—C6—N2179.2 (2)C7—C8—C10—C11−4.6 (5)
N1—C5—C6—N2−0.6 (4)
D—H···AD—HH···AD···AD—H···A
N2—H2B···O20.861.942.629 (3)136.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2B⋯O20.861.942.629 (3)136
  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  The use of leflunomide in the treatment of rheumatoid arthritis: an experimental and clinical review.

Authors:  M Schattenkirchner
Journal:  Immunopharmacology       Date:  2000-05

3.  Leflunomide analogues as potential antiinflammatory agents.

Authors:  Wen-Hsin Huang; Chiao-Li Yang; An-Rong Lee; Hui-Fen Chiu
Journal:  Chem Pharm Bull (Tokyo)       Date:  2003-03       Impact factor: 1.645

  3 in total
  1 in total

1.  5-Methyl-N-[2-(trifluoro-meth-yl)phen-yl]isoxazole-4-carboxamide.

Authors:  De-Cai Wang; Jiang-Kai Qiu; Hai-Xi Zhu; Ping Wei; Ping-Kai Ou-Yang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-04-21
  1 in total

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