Literature DB >> 22590300

4-[(1E)-3-(2,6-Dichloro-3-fluoro-phen-yl)-3-oxoprop-1-en-1-yl]benzonitrile.

Aletti S Praveen, Hemmige S Yathirajan, Badiadka Narayana, Thomas Gerber, Eric Hosten, Richard Betz.   

Abstract

In the title mol-ecule, C(16)H(8)Cl(2)FNO, the benzene rings form a dihedral angle of 78.69 (8)°. The F atom is disordered over two positions in a 0.530 (3):0.470 (3) ratio. The crystal packing exhibits π-π inter-actions between dichloro-substituted rings [centroid-centroid distance = 3.6671 (10) Å] and weak inter-molecular C-H⋯F contacts.

Entities:  

Year:  2012        PMID: 22590300      PMCID: PMC3344538          DOI: 10.1107/S1600536812015589

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of chalcones, see: Rajendra Prasad et al. (2008 ▶); Shivakumar et al. (2005 ▶); Churkin et al. (1982 ▶); Herencia et al. (1998 ▶). For a related structure, see: Betz et al. (2012 ▶). For the graph-set analysis of hydrogen bonds, see: Etter et al. (1990 ▶); Bernstein et al. (1995 ▶).

Experimental

Crystal data

C16H8Cl2FNO M = 320.13 Monoclinic, a = 13.2751 (3) Å b = 8.5002 (2) Å c = 13.9854 (3) Å β = 116.773 (1)° V = 1408.95 (6) Å3 Z = 4 Mo Kα radiation μ = 0.47 mm−1 T = 200 K 0.55 × 0.32 × 0.20 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.783, T max = 0.913 12885 measured reflections 3480 independent reflections 2904 reflections with I > 2σ(I) R int = 0.013

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.098 S = 1.05 3480 reflections 200 parameters H-atom parameters constrained Δρmax = 0.41 e Å−3 Δρmin = −0.43 e Å−3 Data collection: APEX2 (Bruker, 2010 ▶); cell refinement: SAINT (Bruker, 2010 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812015589/cv5282sup1.cif Supplementary material file. DOI: 10.1107/S1600536812015589/cv5282Isup2.cdx Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812015589/cv5282Isup3.hkl Supplementary material file. DOI: 10.1107/S1600536812015589/cv5282Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H8Cl2FNOF(000) = 648
Mr = 320.13Dx = 1.509 Mg m3
Monoclinic, P21/cMelting point = 414–417 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 13.2751 (3) ÅCell parameters from 7660 reflections
b = 8.5002 (2) Åθ = 2.9–28.3°
c = 13.9854 (3) ŵ = 0.47 mm1
β = 116.773 (1)°T = 200 K
V = 1408.95 (6) Å3Platelet, green
Z = 40.55 × 0.32 × 0.20 mm
Bruker APEXII CCD diffractometer3480 independent reflections
Radiation source: fine-focus sealed tube2904 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.013
φ and ω scansθmax = 28.3°, θmin = 2.9°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −17→17
Tmin = 0.783, Tmax = 0.913k = −8→11
12885 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.098H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0358P)2 + 0.6287P] where P = (Fo2 + 2Fc2)/3
3480 reflections(Δ/σ)max < 0.001
200 parametersΔρmax = 0.41 e Å3
0 restraintsΔρmin = −0.43 e Å3
xyzUiso*/UeqOcc. (<1)
Cl10.32198 (4)0.25664 (5)0.03764 (4)0.05826 (14)
Cl20.43426 (5)0.87196 (6)0.08058 (4)0.06998 (17)
O10.23229 (11)0.62352 (16)−0.09939 (9)0.0582 (3)
N1−0.11644 (13)0.5937 (3)0.40221 (14)0.0785 (6)
C10.21695 (12)0.57997 (17)0.14653 (12)0.0392 (3)
H10.29270.54730.18910.047*
C20.18838 (14)0.6169 (2)0.04481 (13)0.0460 (4)
H20.11400.65440.00170.055*
C30.26474 (14)0.60326 (19)−0.00432 (12)0.0435 (3)
C4−0.06074 (13)0.5902 (2)0.35969 (14)0.0525 (4)
C110.14352 (12)0.58457 (17)0.19935 (11)0.0370 (3)
C120.03215 (13)0.6397 (2)0.14813 (13)0.0487 (4)
H120.00220.67710.07650.058*
C13−0.03410 (13)0.6403 (2)0.20037 (13)0.0489 (4)
H13−0.10970.67710.16470.059*
C140.00933 (12)0.58722 (18)0.30543 (12)0.0408 (3)
C150.11978 (12)0.5340 (2)0.35809 (12)0.0440 (3)
H150.14980.49840.43010.053*
C160.18571 (12)0.53320 (19)0.30467 (12)0.0407 (3)
H160.26140.49680.34070.049*
C210.38739 (13)0.56076 (18)0.06658 (11)0.0394 (3)
C220.42114 (12)0.40474 (19)0.08897 (11)0.0404 (3)
C240.61343 (14)0.4808 (3)0.19589 (13)0.0538 (4)
H240.68990.45390.24090.065*
C260.47029 (15)0.6754 (2)0.10883 (13)0.0467 (4)
C230.53293 (14)0.3657 (2)0.15222 (13)0.0474 (4)
H230.55420.25820.16560.057*0.470 (3)
F1B0.6550 (2)0.7502 (4)0.2076 (2)0.0847 (11)0.470 (3)
C250.58158 (15)0.6354 (2)0.17347 (14)0.0545 (4)
H250.63670.71600.20270.065*0.530 (3)
F1A0.56085 (16)0.2148 (3)0.16948 (16)0.0610 (7)0.530 (3)
U11U22U33U12U13U23
Cl10.0520 (2)0.0417 (2)0.0616 (3)−0.00337 (17)0.00832 (19)0.00136 (18)
Cl20.1033 (4)0.0436 (2)0.0648 (3)−0.0126 (2)0.0394 (3)−0.0003 (2)
O10.0635 (7)0.0718 (9)0.0403 (6)0.0168 (6)0.0242 (6)0.0145 (6)
N10.0455 (8)0.1321 (18)0.0629 (10)0.0129 (10)0.0288 (8)−0.0008 (11)
C10.0376 (7)0.0386 (7)0.0407 (7)0.0002 (6)0.0171 (6)0.0005 (6)
C20.0444 (8)0.0502 (9)0.0432 (8)0.0089 (7)0.0195 (7)0.0076 (7)
C30.0508 (8)0.0405 (8)0.0406 (8)0.0047 (7)0.0217 (7)0.0052 (6)
C40.0361 (7)0.0725 (12)0.0473 (9)0.0051 (8)0.0172 (7)−0.0027 (8)
C110.0355 (7)0.0349 (7)0.0389 (7)−0.0007 (6)0.0153 (6)−0.0010 (6)
C120.0397 (8)0.0596 (10)0.0418 (8)0.0076 (7)0.0139 (6)0.0099 (7)
C130.0336 (7)0.0586 (10)0.0497 (9)0.0088 (7)0.0146 (6)0.0058 (7)
C140.0346 (7)0.0428 (8)0.0451 (8)−0.0006 (6)0.0182 (6)−0.0052 (6)
C150.0392 (7)0.0525 (9)0.0404 (7)0.0054 (6)0.0179 (6)0.0025 (7)
C160.0332 (7)0.0465 (8)0.0401 (7)0.0059 (6)0.0147 (6)0.0024 (6)
C210.0461 (8)0.0440 (8)0.0327 (7)0.0000 (6)0.0219 (6)0.0015 (6)
C220.0405 (7)0.0443 (8)0.0348 (7)−0.0011 (6)0.0155 (6)−0.0012 (6)
C240.0390 (8)0.0831 (13)0.0393 (8)−0.0030 (8)0.0176 (7)−0.0014 (8)
C260.0603 (9)0.0472 (9)0.0411 (8)−0.0065 (7)0.0303 (7)−0.0005 (7)
C230.0464 (8)0.0571 (10)0.0389 (7)0.0080 (7)0.0193 (7)0.0015 (7)
F1B0.0738 (17)0.107 (2)0.0622 (16)−0.0519 (16)0.0211 (13)−0.0060 (14)
C250.0535 (9)0.0717 (12)0.0433 (8)−0.0211 (9)0.0260 (8)−0.0071 (8)
F1A0.0529 (11)0.0588 (13)0.0594 (12)0.0184 (9)0.0147 (9)0.0096 (9)
Cl1—C221.7267 (16)C13—H130.9500
Cl2—C261.7338 (18)C14—C151.387 (2)
O1—C31.2112 (18)C15—C161.383 (2)
N1—C41.139 (2)C15—H150.9500
C1—C21.334 (2)C16—H160.9500
C1—C111.465 (2)C21—C261.387 (2)
C1—H10.9500C21—C221.390 (2)
C2—C31.463 (2)C22—C231.383 (2)
C2—H20.9500C24—C231.373 (3)
C3—C211.520 (2)C24—C251.373 (3)
C4—C141.441 (2)C24—H240.9500
C11—C161.390 (2)C26—C251.383 (3)
C11—C121.402 (2)C23—F1A1.327 (3)
C12—C131.373 (2)C23—H230.9500
C12—H120.9500F1B—C251.308 (3)
C13—C141.390 (2)C25—H250.9500
C2—C1—C11126.67 (14)C15—C16—H16119.3
C2—C1—H1116.7C11—C16—H16119.3
C11—C1—H1116.7C26—C21—C22117.46 (14)
C1—C2—C3123.90 (14)C26—C21—C3121.47 (15)
C1—C2—H2118.1C22—C21—C3121.05 (14)
C3—C2—H2118.1C23—C22—C21121.15 (15)
O1—C3—C2121.68 (15)C23—C22—Cl1119.24 (13)
O1—C3—C21119.79 (14)C21—C22—Cl1119.61 (11)
C2—C3—C21118.53 (13)C23—C24—C25118.87 (16)
N1—C4—C14179.4 (2)C23—C24—H24120.6
C16—C11—C12118.39 (14)C25—C24—H24120.6
C16—C11—C1118.96 (13)C25—C26—C21120.98 (17)
C12—C11—C1122.65 (13)C25—C26—Cl2119.32 (14)
C13—C12—C11120.68 (15)C21—C26—Cl2119.70 (13)
C13—C12—H12119.7F1A—C23—C24120.69 (17)
C11—C12—H12119.7F1A—C23—C22118.67 (17)
C12—C13—C14120.06 (14)C24—C23—C22120.64 (17)
C12—C13—H13120.0F1A—C23—H231.0
C14—C13—H13120.0C24—C23—H23119.7
C15—C14—C13120.21 (14)C22—C23—H23119.7
C15—C14—C4120.30 (14)F1B—C25—C24121.9 (2)
C13—C14—C4119.48 (14)F1B—C25—C26117.1 (2)
C16—C15—C14119.30 (14)C24—C25—C26120.87 (16)
C16—C15—H15120.4F1B—C25—H253.7
C14—C15—H15120.4C24—C25—H25119.6
C15—C16—C11121.34 (13)C26—C25—H25119.6
C11—C1—C2—C3−177.25 (15)C26—C21—C22—C230.9 (2)
C1—C2—C3—O1172.76 (17)C3—C21—C22—C23179.07 (13)
C1—C2—C3—C21−6.6 (2)C26—C21—C22—Cl1−179.43 (11)
C2—C1—C11—C16176.31 (16)C3—C21—C22—Cl1−1.24 (19)
C2—C1—C11—C12−4.1 (3)C22—C21—C26—C25−2.0 (2)
C16—C11—C12—C13−1.1 (2)C3—C21—C26—C25179.84 (14)
C1—C11—C12—C13179.29 (16)C22—C21—C26—Cl2178.12 (11)
C11—C12—C13—C140.6 (3)C3—C21—C26—Cl2−0.07 (19)
C12—C13—C14—C150.2 (3)C25—C24—C23—F1A178.08 (18)
C12—C13—C14—C4179.32 (17)C25—C24—C23—C22−1.7 (2)
N1—C4—C14—C15136 (21)C21—C22—C23—F1A−178.81 (16)
N1—C4—C14—C13−43 (21)Cl1—C22—C23—F1A1.5 (2)
C13—C14—C15—C16−0.5 (2)C21—C22—C23—C240.9 (2)
C4—C14—C15—C16−179.57 (16)Cl1—C22—C23—C24−178.75 (12)
C14—C15—C16—C110.0 (2)C23—C24—C25—F1B−176.2 (2)
C12—C11—C16—C150.8 (2)C23—C24—C25—C260.6 (2)
C1—C11—C16—C15−179.54 (14)C21—C26—C25—F1B178.18 (19)
O1—C3—C21—C2684.6 (2)Cl2—C26—C25—F1B−1.9 (2)
C2—C3—C21—C26−96.08 (18)C21—C26—C25—C241.3 (2)
O1—C3—C21—C22−93.55 (19)Cl2—C26—C25—C24−178.81 (13)
C2—C3—C21—C2285.81 (19)
D—H···AD—HH···AD···AD—H···A
C1—H1···F1Ai0.952.503.130 (2)124
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C1—H1⋯F1Ai0.952.503.130 (2)124

Symmetry code: (i) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

Authors:  M C Etter; J C MacDonald; J Bernstein
Journal:  Acta Crystallogr B       Date:  1990-04-01

3.  Synthesis and anti-inflammatory activity of chalcone derivatives.

Authors:  F Herencia; M L Ferrándiz; A Ubeda; J N Domínguez; J E Charris; G M Lobo; M J Alcaraz
Journal:  Bioorg Med Chem Lett       Date:  1998-05-19       Impact factor: 2.823

4.  (2E)-1-(2,6-Dichloro-3-fluoro-phen-yl)-3-(4-fluoro-phen-yl)prop-2-en-1-one.

Authors:  Richard Betz; Thomas Gerber; Eric Hosten; Aletti S Praveen; Hemmige S Yathirajan; Badiadka Narayana
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-25

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

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