| Literature DB >> 22590198 |
A Jahubar Ali, S Athimoolam, S Asath Bahadur.
Abstract
IN THE TITLE COMPOUND (SYSTEMATIC NAME: 2-amino-1-methyl-4-oxo-4,5-dihydro-1H-imidazol-3-ium 2-chloro-acetate), C(4)H(8)N(3)O(+)·C(2)H(2)ClO(2) (-), the mol-ecular aggregations are stabil-ized through classical (N-H⋯O) and non-classical (C-H⋯O and C-H⋯N) hydrogen-bonding inter-actions. The cations are linked to the anions, forming ion pairs through two N-H⋯O bonds that produce characteristic R(2) (2)(8) ring motifs. These cation-anion pairs are connected through another N-H⋯O hydrogen bond, leading to an R(4) (2)(8) ring motif. Further weak C-H⋯N inter-actions link the mol-ecules along the a axis, while other C-H⋯O inter-actions generate zigzag chains extending along b.Entities:
Year: 2012 PMID: 22590198 PMCID: PMC3344436 DOI: 10.1107/S1600536812012068
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C4H8N3O+·C2H2ClO2− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 2516 reflections |
| θ = 2.2–23.4° | |
| µ = 0.40 mm−1 | |
| β = 95.326 (2)° | Block, colourless |
| 0.24 × 0.22 × 0.19 mm | |
| Bruker SMART APEX CCD area-detector diffractometer | 1472 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 25.0°, θmin = 2.3° |
| ω scans | |
| 8205 measured reflections | |
| 1587 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1587 reflections | (Δ/σ)max < 0.001 |
| 131 parameters | Δρmax = 0.33 e Å−3 |
| 0 restraints | Δρmin = −0.27 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N11 | 1.0950 (2) | 0.16015 (11) | 0.55491 (13) | 0.0435 (4) | |
| C11 | 1.1347 (4) | 0.13325 (16) | 0.67962 (17) | 0.0517 (5) | |
| H11A | 1.0491 | 0.1753 | 0.7270 | 0.078* | |
| H11B | 1.2969 | 0.1383 | 0.7052 | 0.078* | |
| H11C | 1.0845 | 0.0683 | 0.6895 | 0.078* | |
| C12 | 1.2339 (3) | 0.22831 (14) | 0.49571 (17) | 0.0474 (5) | |
| H12A | 1.3926 | 0.2064 | 0.4957 | 0.057* | |
| H12B | 1.2328 | 0.2908 | 0.5336 | 0.057* | |
| C13 | 1.1149 (3) | 0.23140 (13) | 0.37071 (18) | 0.0471 (5) | |
| O13 | 1.1682 (3) | 0.27677 (12) | 0.28629 (14) | 0.0668 (5) | |
| N14 | 0.9267 (3) | 0.17187 (11) | 0.37131 (14) | 0.0434 (4) | |
| C15 | 0.9179 (3) | 0.13198 (12) | 0.48112 (15) | 0.0390 (4) | |
| N15 | 0.7527 (3) | 0.07372 (13) | 0.50395 (16) | 0.0482 (4) | |
| H1N | 0.741 (4) | 0.0498 (17) | 0.569 (2) | 0.063 (7)* | |
| H2N | 0.636 (4) | 0.0637 (17) | 0.441 (2) | 0.062 (6)* | |
| H14N | 0.835 (4) | 0.1546 (17) | 0.311 (2) | 0.062 (7)* | |
| C21 | 0.4400 (3) | 0.07309 (13) | 0.22026 (16) | 0.0434 (4) | |
| C22 | 0.2464 (4) | 0.04780 (17) | 0.12518 (18) | 0.0561 (5) | |
| H22A | 0.0995 | 0.0614 | 0.1564 | 0.067* | |
| H22B | 0.2520 | −0.0206 | 0.1099 | 0.067* | |
| O21 | 0.6111 (2) | 0.11830 (11) | 0.19341 (13) | 0.0578 (4) | |
| O22 | 0.4072 (2) | 0.04254 (11) | 0.32210 (12) | 0.0547 (4) | |
| Cl1 | 0.25524 (10) | 0.10901 (5) | −0.01176 (5) | 0.0725 (3) |
| N11 | 0.0406 (8) | 0.0488 (8) | 0.0392 (8) | −0.0010 (6) | −0.0055 (6) | −0.0015 (6) |
| C11 | 0.0518 (11) | 0.0622 (12) | 0.0390 (10) | 0.0059 (9) | −0.0074 (8) | −0.0025 (9) |
| C12 | 0.0363 (9) | 0.0517 (11) | 0.0536 (11) | −0.0030 (7) | 0.0016 (8) | −0.0055 (8) |
| C13 | 0.0405 (9) | 0.0501 (10) | 0.0510 (11) | −0.0005 (8) | 0.0067 (8) | 0.0015 (8) |
| O13 | 0.0589 (9) | 0.0813 (11) | 0.0612 (10) | −0.0129 (7) | 0.0108 (7) | 0.0176 (8) |
| N14 | 0.0409 (8) | 0.0507 (9) | 0.0373 (8) | −0.0039 (6) | −0.0028 (6) | 0.0016 (6) |
| C15 | 0.0382 (9) | 0.0401 (8) | 0.0379 (9) | 0.0037 (7) | −0.0009 (7) | −0.0010 (7) |
| N15 | 0.0462 (10) | 0.0556 (10) | 0.0414 (9) | −0.0097 (7) | −0.0043 (8) | 0.0082 (7) |
| C21 | 0.0448 (10) | 0.0456 (9) | 0.0380 (9) | −0.0027 (7) | −0.0056 (8) | 0.0014 (7) |
| C22 | 0.0539 (11) | 0.0694 (13) | 0.0427 (10) | −0.0161 (10) | −0.0087 (9) | 0.0053 (9) |
| O21 | 0.0544 (8) | 0.0748 (10) | 0.0418 (8) | −0.0223 (7) | −0.0081 (6) | 0.0098 (6) |
| O22 | 0.0545 (8) | 0.0661 (9) | 0.0413 (8) | −0.0140 (7) | −0.0068 (6) | 0.0123 (6) |
| Cl1 | 0.0710 (4) | 0.0998 (5) | 0.0426 (3) | −0.0207 (3) | −0.0164 (3) | 0.0133 (3) |
| N11—C15 | 1.318 (2) | N14—C15 | 1.357 (2) |
| N11—C12 | 1.446 (2) | N14—H14N | 0.86 (3) |
| N11—C11 | 1.446 (2) | C15—N15 | 1.299 (2) |
| C11—H11A | 0.9600 | N15—H1N | 0.81 (3) |
| C11—H11B | 0.9600 | N15—H2N | 0.94 (3) |
| C11—H11C | 0.9600 | C21—O21 | 1.236 (2) |
| C12—C13 | 1.505 (3) | C21—O22 | 1.251 (2) |
| C12—H12A | 0.9700 | C21—C22 | 1.517 (2) |
| C12—H12B | 0.9700 | C22—Cl1 | 1.762 (2) |
| C13—O13 | 1.203 (2) | C22—H22A | 0.9700 |
| C13—N14 | 1.371 (2) | C22—H22B | 0.9700 |
| C15—N11—C12 | 109.98 (15) | C15—N14—C13 | 110.45 (16) |
| C15—N11—C11 | 125.12 (16) | C15—N14—H14N | 122.0 (16) |
| C12—N11—C11 | 124.71 (15) | C13—N14—H14N | 127.1 (16) |
| N11—C11—H11A | 109.5 | N15—C15—N11 | 127.46 (17) |
| N11—C11—H11B | 109.5 | N15—C15—N14 | 121.71 (16) |
| H11A—C11—H11B | 109.5 | N11—C15—N14 | 110.83 (16) |
| N11—C11—H11C | 109.5 | C15—N15—H1N | 124.1 (18) |
| H11A—C11—H11C | 109.5 | C15—N15—H2N | 116.0 (14) |
| H11B—C11—H11C | 109.5 | H1N—N15—H2N | 120 (2) |
| N11—C12—C13 | 102.72 (14) | O21—C21—O22 | 126.16 (17) |
| N11—C12—H12A | 111.2 | O21—C21—C22 | 120.37 (16) |
| C13—C12—H12A | 111.2 | O22—C21—C22 | 113.46 (16) |
| N11—C12—H12B | 111.2 | C21—C22—Cl1 | 114.92 (14) |
| C13—C12—H12B | 111.2 | C21—C22—H22A | 108.5 |
| H12A—C12—H12B | 109.1 | Cl1—C22—H22A | 108.5 |
| O13—C13—N14 | 125.77 (19) | C21—C22—H22B | 108.5 |
| O13—C13—C12 | 128.30 (18) | Cl1—C22—H22B | 108.5 |
| N14—C13—C12 | 105.92 (16) | H22A—C22—H22B | 107.5 |
| C15—N11—C12—C13 | −3.13 (19) | C11—N11—C15—N15 | −2.4 (3) |
| C11—N11—C12—C13 | −178.40 (16) | C12—N11—C15—N14 | 2.9 (2) |
| N11—C12—C13—O13 | −178.5 (2) | C11—N11—C15—N14 | 178.17 (16) |
| N11—C12—C13—N14 | 2.23 (19) | C13—N14—C15—N15 | 179.15 (17) |
| O13—C13—N14—C15 | −179.97 (19) | C13—N14—C15—N11 | −1.4 (2) |
| C12—C13—N14—C15 | −0.7 (2) | O21—C21—C22—Cl1 | −13.4 (3) |
| C12—N11—C15—N15 | −177.63 (18) | O22—C21—C22—Cl1 | 167.75 (15) |
| H··· | ||||
| N15—H1 | 0.81 (3) | 2.02 (3) | 2.762 (2) | 152 (2) |
| N15—H2 | 0.94 (3) | 1.82 (3) | 2.758 (2) | 179 (2) |
| N14—H14 | 0.86 (3) | 1.83 (3) | 2.686 (2) | 173 (2) |
| C11—H11 | 0.96 | 2.46 | 3.305 (3) | 147 |
| C11—H11 | 0.96 | 2.55 | 3.448 (3) | 156 |
| C12—H12 | 0.97 | 2.78 | 3.695 (3) | 157 |
| C12—H12 | 0.97 | 2.36 | 3.208 (2) | 146 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N15—H1 | 0.81 (3) | 2.02 (3) | 2.762 (2) | 152 (2) |
| N15—H2 | 0.94 (3) | 1.82 (3) | 2.758 (2) | 179 (2) |
| N14—H14 | 0.86 (3) | 1.83 (3) | 2.686 (2) | 173 (2) |
| C11—H11 | 0.96 | 2.46 | 3.305 (3) | 147 |
| C11—H11 | 0.96 | 2.55 | 3.448 (3) | 156 |
| C12—H12 | 0.97 | 2.78 | 3.695 (3) | 157 |
| C12—H12 | 0.97 | 2.36 | 3.208 (2) | 146 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .