Literature DB >> 22590029

(2E)-3-(3-Nitro-phen-yl)-1-[4-(piperidin-1-yl)phen-yl]prop-2-en-1-one.

Hoong-Kun Fun, Tze Shyang Chia, Prakash S Nayak, B Narayana, B K Sarojini.   

Abstract

In the title compound, C(20)H(20)N(2)O(3), the piperidine ring adopts a chair conformation and its mean plane forms dihedral angles of 19.63 (9) and 19.44 (9)°, respectively, with the benzene and the nitro-substituted benzene ring. The benzene and nitro-substituted benzene rings are almost coplanar and make a dihedral angle of 4.78 (8)°. In the crystal, mol-ecules are linked by C-H⋯O hydrogen bonds into two-dimensional networks parallel to the ab plane. The crystal packing is further stabilized by π-π inter-actions [maximum centroid-centroid distance = 3.7807 (12) Å].

Entities:  

Year:  2012        PMID: 22590029      PMCID: PMC3343948          DOI: 10.1107/S1600536812008847

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures and background to chalcones, see: Fun et al. (2011a ▶,b ▶,c ▶,d ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶). For ring conformations and ring puckering analysis, see: Cremer & Pople (1975 ▶). For reference bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C20H20N2O3 M = 336.38 Orthorhombic, a = 7.4268 (12) Å b = 11.3884 (18) Å c = 39.447 (6) Å V = 3336.4 (9) Å3 Z = 8 Mo Kα radiation μ = 0.09 mm−1 T = 100 K 0.30 × 0.22 × 0.11 mm

Data collection

Bruker APEX DUO CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.973, T max = 0.990 20847 measured reflections 4870 independent reflections 3174 reflections with I > 2σ(I) R int = 0.062

Refinement

R[F 2 > 2σ(F 2)] = 0.056 wR(F 2) = 0.154 S = 1.04 4870 reflections 226 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.23 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812008847/ds2176sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812008847/ds2176Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812008847/ds2176Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H20N2O3F(000) = 1424
Mr = 336.38Dx = 1.339 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 2665 reflections
a = 7.4268 (12) Åθ = 3.1–29.6°
b = 11.3884 (18) ŵ = 0.09 mm1
c = 39.447 (6) ÅT = 100 K
V = 3336.4 (9) Å3Block, orange
Z = 80.30 × 0.22 × 0.11 mm
Bruker APEX DUO CCD area-detector diffractometer4870 independent reflections
Radiation source: fine-focus sealed tube3174 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.062
φ and ω scansθmax = 30.0°, θmin = 2.9°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −10→9
Tmin = 0.973, Tmax = 0.990k = −16→16
20847 measured reflectionsl = −55→47
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.056Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.154H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0603P)2 + 1.4691P] where P = (Fo2 + 2Fc2)/3
4870 reflections(Δ/σ)max < 0.001
226 parametersΔρmax = 0.29 e Å3
0 restraintsΔρmin = −0.23 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.6504 (2)0.26696 (11)−0.01933 (3)0.0378 (4)
O20.9010 (2)0.54808 (13)0.17630 (4)0.0448 (4)
O30.8344 (2)0.37615 (12)0.15668 (3)0.0388 (4)
N10.5842 (2)0.49503 (12)−0.16639 (4)0.0282 (4)
N20.8685 (2)0.48100 (13)0.15277 (4)0.0297 (4)
C10.6185 (3)0.40300 (17)−0.19185 (5)0.0370 (5)
H1A0.57380.3285−0.18340.044*
H1B0.74730.3954−0.19530.044*
C20.5292 (3)0.43002 (18)−0.22548 (5)0.0403 (5)
H2A0.56380.3710−0.24200.048*
H2B0.39950.4266−0.22280.048*
C30.5819 (3)0.55016 (19)−0.23851 (5)0.0372 (5)
H3A0.51380.5681−0.25880.045*
H3B0.70890.5507−0.24430.045*
C40.5445 (3)0.64214 (17)−0.21165 (5)0.0352 (5)
H4A0.41570.6478−0.20800.042*
H4B0.58700.7179−0.21950.042*
C50.6370 (3)0.61159 (16)−0.17848 (5)0.0333 (5)
H5A0.76640.6138−0.18170.040*
H5B0.60590.6698−0.16150.040*
C60.6084 (2)0.46749 (14)−0.13234 (4)0.0234 (4)
C70.5554 (3)0.35640 (14)−0.11964 (5)0.0260 (4)
H7A0.50740.3008−0.13440.031*
C80.5738 (3)0.32971 (14)−0.08587 (4)0.0242 (4)
H8A0.53810.2560−0.07830.029*
C90.6450 (2)0.41027 (13)−0.06242 (4)0.0215 (4)
C100.6947 (2)0.52043 (13)−0.07476 (4)0.0211 (3)
H10A0.73990.5763−0.05980.025*
C110.6784 (2)0.54852 (14)−0.10881 (4)0.0229 (4)
H11A0.71440.6223−0.11630.027*
C120.6717 (3)0.37118 (14)−0.02707 (4)0.0249 (4)
C130.7283 (3)0.45833 (14)−0.00107 (4)0.0241 (4)
H13A0.73550.5375−0.00670.029*
C140.7688 (3)0.42367 (14)0.03032 (4)0.0243 (4)
H14A0.76050.34370.03480.029*
C150.8250 (2)0.49959 (13)0.05843 (4)0.0213 (3)
C160.8867 (2)0.61466 (14)0.05323 (5)0.0236 (4)
H16A0.89170.64490.03130.028*
C170.9403 (3)0.68375 (14)0.08030 (5)0.0272 (4)
H17A0.98260.75940.07630.033*
C180.9318 (3)0.64173 (14)0.11314 (5)0.0266 (4)
H18A0.96520.68870.13140.032*
C190.8721 (2)0.52768 (15)0.11814 (4)0.0236 (4)
C200.8195 (2)0.45610 (14)0.09165 (4)0.0221 (4)
H20A0.78090.37980.09580.027*
U11U22U33U12U13U23
O10.0575 (11)0.0194 (6)0.0366 (7)−0.0105 (6)−0.0024 (7)−0.0006 (5)
O20.0530 (11)0.0507 (9)0.0308 (7)−0.0046 (8)−0.0067 (7)−0.0089 (6)
O30.0516 (10)0.0305 (7)0.0342 (7)0.0097 (7)0.0058 (7)0.0024 (6)
N10.0357 (10)0.0217 (7)0.0273 (7)0.0073 (7)−0.0075 (7)−0.0091 (6)
N20.0293 (9)0.0296 (8)0.0301 (8)0.0053 (7)−0.0011 (7)−0.0036 (6)
C10.0449 (14)0.0328 (10)0.0334 (10)0.0072 (9)−0.0069 (9)−0.0158 (8)
C20.0478 (15)0.0418 (11)0.0312 (10)0.0023 (10)−0.0072 (9)−0.0146 (8)
C30.0303 (12)0.0533 (13)0.0280 (9)−0.0016 (10)−0.0009 (8)−0.0081 (9)
C40.0414 (13)0.0365 (10)0.0279 (9)0.0028 (9)−0.0026 (9)0.0000 (8)
C50.0452 (14)0.0261 (9)0.0287 (9)0.0047 (9)−0.0062 (9)−0.0064 (7)
C60.0218 (9)0.0198 (7)0.0287 (8)0.0071 (7)−0.0053 (7)−0.0067 (6)
C70.0234 (10)0.0200 (8)0.0346 (9)0.0018 (7)−0.0059 (7)−0.0100 (7)
C80.0208 (10)0.0158 (7)0.0361 (9)−0.0002 (6)−0.0011 (7)−0.0049 (6)
C90.0181 (9)0.0161 (7)0.0303 (8)0.0012 (6)0.0001 (7)−0.0048 (6)
C100.0195 (9)0.0148 (7)0.0290 (8)0.0010 (6)−0.0017 (7)−0.0060 (6)
C110.0232 (10)0.0159 (7)0.0295 (8)0.0028 (7)−0.0013 (7)−0.0048 (6)
C120.0247 (10)0.0200 (7)0.0300 (9)−0.0017 (7)0.0005 (7)−0.0037 (6)
C130.0262 (10)0.0167 (7)0.0295 (9)0.0003 (7)0.0000 (7)−0.0030 (6)
C140.0260 (10)0.0159 (7)0.0309 (9)−0.0017 (7)0.0006 (7)−0.0014 (6)
C150.0180 (9)0.0150 (7)0.0307 (8)0.0012 (6)−0.0007 (7)−0.0024 (6)
C160.0202 (9)0.0169 (7)0.0337 (9)0.0009 (7)0.0007 (7)−0.0002 (6)
C170.0224 (10)0.0157 (7)0.0435 (10)−0.0008 (7)−0.0006 (8)−0.0043 (7)
C180.0210 (10)0.0215 (8)0.0373 (10)0.0008 (7)−0.0036 (7)−0.0095 (7)
C190.0189 (9)0.0234 (8)0.0285 (8)0.0052 (7)−0.0011 (7)−0.0028 (6)
C200.0209 (9)0.0163 (7)0.0291 (8)0.0022 (6)−0.0007 (7)−0.0017 (6)
O1—C121.236 (2)C7—H7A0.9300
O2—N21.226 (2)C8—C91.406 (2)
O3—N21.230 (2)C8—H8A0.9300
N1—C61.391 (2)C9—C101.395 (2)
N1—C51.464 (2)C9—C121.477 (2)
N1—C11.474 (2)C10—C111.386 (2)
N2—C191.466 (2)C10—H10A0.9300
C1—C21.515 (3)C11—H11A0.9300
C1—H1A0.9700C12—C131.488 (2)
C1—H1B0.9700C13—C141.334 (2)
C2—C31.513 (3)C13—H13A0.9300
C2—H2A0.9700C14—C151.467 (2)
C2—H2B0.9700C14—H14A0.9300
C3—C41.516 (3)C15—C201.401 (2)
C3—H3A0.9700C15—C161.403 (2)
C3—H3B0.9700C16—C171.385 (2)
C4—C51.518 (3)C16—H16A0.9300
C4—H4A0.9700C17—C181.382 (3)
C4—H4B0.9700C17—H17A0.9300
C5—H5A0.9700C18—C191.387 (2)
C5—H5B0.9700C18—H18A0.9300
C6—C111.408 (2)C19—C201.382 (2)
C6—C71.417 (2)C20—H20A0.9300
C7—C81.373 (2)
C6—N1—C5118.97 (14)C6—C7—H7A119.6
C6—N1—C1118.37 (14)C7—C8—C9122.09 (16)
C5—N1—C1112.13 (15)C7—C8—H8A119.0
O2—N2—O3123.40 (16)C9—C8—H8A119.0
O2—N2—C19118.41 (15)C10—C9—C8117.18 (16)
O3—N2—C19118.19 (14)C10—C9—C12124.39 (15)
N1—C1—C2112.11 (16)C8—C9—C12118.34 (15)
N1—C1—H1A109.2C11—C10—C9121.49 (15)
C2—C1—H1A109.2C11—C10—H10A119.3
N1—C1—H1B109.2C9—C10—H10A119.3
C2—C1—H1B109.2C10—C11—C6121.31 (15)
H1A—C1—H1B107.9C10—C11—H11A119.3
C3—C2—C1111.60 (18)C6—C11—H11A119.3
C3—C2—H2A109.3O1—C12—C9120.37 (15)
C1—C2—H2A109.3O1—C12—C13120.44 (16)
C3—C2—H2B109.3C9—C12—C13119.18 (14)
C1—C2—H2B109.3C14—C13—C12120.41 (15)
H2A—C2—H2B108.0C14—C13—H13A119.8
C2—C3—C4109.88 (17)C12—C13—H13A119.8
C2—C3—H3A109.7C13—C14—C15126.26 (15)
C4—C3—H3A109.7C13—C14—H14A116.9
C2—C3—H3B109.7C15—C14—H14A116.9
C4—C3—H3B109.7C20—C15—C16118.44 (15)
H3A—C3—H3B108.2C20—C15—C14119.36 (15)
C3—C4—C5111.17 (17)C16—C15—C14122.20 (15)
C3—C4—H4A109.4C17—C16—C15120.77 (16)
C5—C4—H4A109.4C17—C16—H16A119.6
C3—C4—H4B109.4C15—C16—H16A119.6
C5—C4—H4B109.4C18—C17—C16120.84 (16)
H4A—C4—H4B108.0C18—C17—H17A119.6
N1—C5—C4111.55 (16)C16—C17—H17A119.6
N1—C5—H5A109.3C17—C18—C19118.19 (16)
C4—C5—H5A109.3C17—C18—H18A120.9
N1—C5—H5B109.3C19—C18—H18A120.9
C4—C5—H5B109.3C20—C19—C18122.36 (16)
H5A—C5—H5B108.0C20—C19—N2119.06 (15)
N1—C6—C11122.43 (16)C18—C19—N2118.56 (15)
N1—C6—C7120.46 (15)C19—C20—C15119.38 (15)
C11—C6—C7117.06 (15)C19—C20—H20A120.3
C8—C7—C6120.87 (15)C15—C20—H20A120.3
C8—C7—H7A119.6
C6—N1—C1—C2160.67 (19)C8—C9—C12—O17.8 (3)
C5—N1—C1—C2−54.9 (2)C10—C9—C12—C1310.0 (3)
N1—C1—C2—C354.1 (3)C8—C9—C12—C13−173.55 (17)
C1—C2—C3—C4−53.8 (3)O1—C12—C13—C144.7 (3)
C2—C3—C4—C554.8 (2)C9—C12—C13—C14−174.04 (18)
C6—N1—C5—C4−159.97 (17)C12—C13—C14—C15−179.56 (17)
C1—N1—C5—C455.8 (2)C13—C14—C15—C20164.14 (19)
C3—C4—C5—N1−56.2 (2)C13—C14—C15—C16−16.6 (3)
C5—N1—C6—C111.4 (3)C20—C15—C16—C17−0.2 (3)
C1—N1—C6—C11143.41 (19)C14—C15—C16—C17−179.45 (17)
C5—N1—C6—C7178.68 (17)C15—C16—C17—C18−1.0 (3)
C1—N1—C6—C7−39.3 (3)C16—C17—C18—C191.5 (3)
N1—C6—C7—C8−178.05 (17)C17—C18—C19—C20−0.7 (3)
C11—C6—C7—C8−0.6 (3)C17—C18—C19—N2177.91 (16)
C6—C7—C8—C90.1 (3)O2—N2—C19—C20−174.07 (18)
C7—C8—C9—C100.9 (3)O3—N2—C19—C206.5 (3)
C7—C8—C9—C12−175.81 (17)O2—N2—C19—C187.2 (3)
C8—C9—C10—C11−1.4 (3)O3—N2—C19—C18−172.18 (17)
C12—C9—C10—C11175.06 (17)C18—C19—C20—C15−0.5 (3)
C9—C10—C11—C60.9 (3)N2—C19—C20—C15−179.10 (16)
N1—C6—C11—C10177.47 (17)C16—C15—C20—C190.9 (3)
C7—C6—C11—C100.1 (3)C14—C15—C20—C19−179.82 (17)
C10—C9—C12—O1−168.65 (18)
D—H···AD—HH···AD···AD—H···A
C7—H7A···O3i0.932.553.441 (2)161
C16—H16A···O1ii0.932.453.358 (2)164
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C7—H7A⋯O3i0.932.553.441 (2)161
C16—H16A⋯O1ii0.932.453.358 (2)164

Symmetry codes: (i) ; (ii) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  (2E)-1-(2-Hy-droxy-5-methyl-phen-yl)-3-(4-meth-oxy-phen-yl)prop-2-en-1-one.

Authors:  Hoong-Kun Fun; Suhana Arshad; B K Sarojini; V Musthafa Khaleel; B Narayana
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-29

3.  (2E)-3-(3-Benzyl-oxyphen-yl)-1-(2-hydroxy-5-methyl-phen-yl)prop-2-en-1-one.

Authors:  Hoong-Kun Fun; Suhana Arshad; B K Sarojini; V Musthafa Khaleel; B Narayana
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-05-11

4.  (2E)-3-[3-(Benz-yloxy)phen-yl]-1-(2-hy-droxy-phen-yl)prop-2-en-1-one.

Authors:  Hoong-Kun Fun; Wan-Sin Loh; B K Sarojini; V Musthafa Khaleel; B Narayana
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-05-07

5.  (2E)-1-(2,5-Dimeth-oxy-phen-yl)-3-(3-nitro-phen-yl)prop-2-en-1-one.

Authors:  Hoong-Kun Fun; Tze Shyang Chia; B Narayana; Prakash S Nayak; B K Sarojini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-29

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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  1 in total

1.  Crystal structure and Hirshfeld surface analysis of (E)-4-{[2,2-di-chloro-1-(4-meth-oxy-phen-yl)ethen-yl]diazen-yl}benzo-nitrile.

Authors:  Mehmet Akkurt; Namiq Q Shikhaliyev; Ulviyya F Askerova; Sevinc H Mukhtarova; Gunay Z Mammadova; Flavien A A Toze
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2019-07-16
  1 in total

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