Literature DB >> 22589851

Poly[hydrazin-1-ium [diaqua-bis-(μ(4)-pyridazine-3,6-dicarboxyl-ato)trilithate] monohydrate].

Wojciech Starosta1, Janusz Leciejewicz.   

Abstract

The structure of the title compound, {(N(2)H(5))[Li(3)(C(6)H(2)N(2)O(4))(2)(H(2)O)(2)]·H(2)O}(n), is composed of mol-ecular dimers, each built up of two symmetry-related Li(I) ions with distorted trigonal-bipyramidal coordinations bridged by two deprotonated ligand mol-ecules via their N,O-bonding sites. Doubly solvated Li(I) ions with a distorted tetra-hedral geometry link adjacent dimers, forming a polymer generated by bridging bidentate carboxyl-ato O atoms to Li(I) ions in adjacent dimers, forming anionic layers parallel to the ac plane with monoprotonated hydrazinium cations and crystal water mol-ecules positioned between them. The layers are held together by an extended system of hydrogen bonds in which the hydrazinium cations and coordinated and crystal water mol-ecules act as donors and carboxyl-ate O atoms act as acceptors.

Entities:  

Year:  2012        PMID: 22589851      PMCID: PMC3343883          DOI: 10.1107/S1600536812012743

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of LiI complexes with pyridazine-3,6-dicarboxyl­ate ligands, see: Starosta & Leciejewicz (2010 ▶, 2011 ▶, 2012 ▶). The structure of a hydrazine adduct of pyridazine-3,6-dicarb­oxy­lic acid was also reported by Starosta & Leciejewicz (2008 ▶).

Experimental

Crystal data

(N2H5)[Li3(C6H2N2O4)2(H2O)2]·H2O M = 440.12 Triclinic, a = 5.215 (1) Å b = 7.3356 (15) Å c = 24.001 (5) Å α = 97.62 (3)° β = 90.62 (3)° γ = 95.77 (3)° V = 905.2 (3) Å3 Z = 2 Mo Kα radiation μ = 0.14 mm−1 T = 293 K 0.40 × 0.14 × 0.06 mm

Data collection

Kuma KM-4 four-cricle diffractometer Absorption correction: analytical (CrysAlis RED; Oxford Diffraction, 2008 ▶) T min = 0.982, T max = 0.992 5141 measured reflections 4676 independent reflections 2660 reflections with I > 2σ(I) R int = 0.051 3 standard reflections every 200 reflections intensity decay: 1.4%

Refinement

R[F 2 > 2σ(F 2)] = 0.057 wR(F 2) = 0.243 S = 1.06 4676 reflections 329 parameters 10 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.56 e Å−3 Δρmin = −0.48 e Å−3 Data collection: KM-4 Software (Kuma, 1996 ▶); cell refinement: KM-4 Software; data reduction: DATAPROC (Kuma, 2001 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812012743/kp2395sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812012743/kp2395Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(N2H5)[Li3(C6H2N2O4)2(H2O)2]·H2OZ = 2
Mr = 440.12F(000) = 452
Triclinic, P1Dx = 1.615 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.215 (1) ÅCell parameters from 25 reflections
b = 7.3356 (15) Åθ = 6–15°
c = 24.001 (5) ŵ = 0.14 mm1
α = 97.62 (3)°T = 293 K
β = 90.62 (3)°Plate, colourless
γ = 95.77 (3)°0.40 × 0.14 × 0.06 mm
V = 905.2 (3) Å3
Kuma KM-4 four-cricle diffractometer2660 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.051
Graphite monochromatorθmax = 30.1°, θmin = 1.7°
profile data from ω/2θ scansh = −7→0
Absorption correction: analytical (CrysAlis RED; Oxford Diffraction, 2008)k = −9→10
Tmin = 0.982, Tmax = 0.992l = −31→33
5141 measured reflections3 standard reflections every 200 reflections
4676 independent reflections intensity decay: 1.4%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.057Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.243H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.1704P)2 + 0.0007P] where P = (Fo2 + 2Fc2)/3
4676 reflections(Δ/σ)max < 0.001
329 parametersΔρmax = 0.56 e Å3
10 restraintsΔρmin = −0.48 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O210.5659 (4)0.6958 (3)−0.10200 (9)0.0309 (5)
O120.1688 (4)0.6942 (3)0.56969 (10)0.0294 (5)
N210.7101 (4)0.8483 (3)0.00022 (10)0.0205 (5)
O110.5736 (4)0.7887 (3)0.60076 (9)0.0306 (5)
N110.7993 (5)0.8737 (3)0.44798 (10)0.0227 (5)
O230.6818 (5)0.9204 (3)0.19576 (9)0.0301 (5)
O220.1624 (4)0.6266 (3)−0.07499 (10)0.0307 (5)
N120.7115 (5)0.8489 (3)0.49847 (10)0.0219 (5)
O240.9860 (5)1.0790 (3)0.15156 (9)0.0335 (5)
C230.6641 (5)0.8841 (4)0.09640 (12)0.0215 (6)
C170.4028 (5)0.7428 (4)0.56305 (12)0.0218 (5)
N220.7999 (5)0.9209 (3)0.05164 (10)0.0225 (5)
C280.7876 (6)0.9699 (4)0.15267 (13)0.0255 (6)
C180.7881 (6)0.8250 (4)0.34710 (12)0.0258 (6)
O130.9742 (5)0.9479 (3)0.34981 (10)0.0368 (6)
C160.6660 (6)0.7916 (4)0.40213 (12)0.0219 (6)
C270.3945 (5)0.6834 (4)−0.06642 (12)0.0225 (6)
C140.3368 (6)0.6633 (4)0.45630 (12)0.0244 (6)
H140.17870.59620.46050.029*
C240.4272 (6)0.7763 (4)0.09217 (13)0.0261 (6)
H240.33700.75240.12410.031*
C260.4807 (5)0.7464 (4)−0.00552 (12)0.0199 (5)
C250.3319 (5)0.7071 (4)0.03952 (13)0.0259 (6)
H250.17320.63620.03420.031*
C130.4859 (5)0.7499 (4)0.50274 (12)0.0198 (5)
C150.4332 (6)0.6814 (4)0.40447 (13)0.0275 (6)
H150.34680.62250.37190.033*
Li11.0824 (10)1.0999 (8)0.4223 (2)0.0296 (11)
Li20.9101 (9)0.8297 (8)−0.0796 (2)0.0283 (11)
Li30.7103 (10)0.6895 (7)0.2248 (2)0.0278 (11)
N10.4289 (6)0.1897 (5)0.27436 (13)0.0376 (7)
N20.1607 (6)0.1293 (5)0.26487 (13)0.0404 (7)
O10.4489 (5)0.4788 (4)0.20777 (11)0.0344 (6)
H110.449 (10)0.404 (7)0.230 (2)0.052*
H120.449 (9)0.426 (7)0.170 (2)0.052*
O30.9495 (6)0.4090 (4)0.32720 (12)0.0462 (7)
H310.912 (10)0.399 (8)0.3605 (11)0.069*
H320.852 (9)0.474 (7)0.3144 (19)0.069*
O20.9871 (5)0.5947 (4)0.18013 (13)0.0465 (7)
O140.6997 (5)0.7239 (4)0.30427 (10)0.0383 (6)
H220.977 (14)0.524 (8)0.1501 (17)0.10 (2)*
H211.112 (9)0.559 (8)0.195 (3)0.08 (2)*
H10.451 (11)0.188 (7)0.3107 (9)0.064 (16)*
H40.138 (13)0.029 (6)0.283 (2)0.081 (18)*
H20.497 (9)0.104 (5)0.2505 (18)0.058 (14)*
H50.066 (12)0.221 (7)0.280 (3)0.11 (3)*
H30.124 (12)0.102 (8)0.2283 (10)0.082 (19)*
U11U22U33U12U13U23
O210.0201 (10)0.0448 (13)0.0251 (11)−0.0021 (9)0.0015 (8)−0.0012 (9)
O120.0152 (10)0.0384 (12)0.0354 (12)0.0010 (8)0.0057 (8)0.0091 (9)
N210.0150 (11)0.0246 (11)0.0215 (12)0.0002 (8)0.0003 (8)0.0029 (9)
O110.0194 (10)0.0481 (13)0.0235 (11)−0.0024 (9)0.0014 (8)0.0065 (9)
N110.0177 (11)0.0273 (12)0.0236 (12)−0.0010 (9)0.0000 (9)0.0071 (9)
O230.0348 (12)0.0328 (11)0.0240 (11)0.0046 (9)0.0060 (9)0.0071 (8)
O220.0164 (10)0.0389 (12)0.0344 (12)−0.0016 (8)−0.0022 (8)−0.0004 (9)
N120.0168 (11)0.0272 (12)0.0220 (12)0.0019 (9)0.0019 (9)0.0039 (9)
O240.0317 (13)0.0422 (13)0.0237 (11)−0.0107 (10)−0.0029 (9)0.0048 (9)
C230.0184 (13)0.0228 (13)0.0240 (13)0.0029 (10)0.0022 (10)0.0046 (10)
C170.0192 (13)0.0234 (13)0.0236 (13)0.0044 (10)0.0031 (10)0.0041 (10)
N220.0165 (11)0.0266 (12)0.0239 (12)0.0008 (9)0.0005 (9)0.0026 (9)
C280.0259 (15)0.0251 (13)0.0262 (15)0.0050 (11)0.0014 (11)0.0036 (11)
C180.0274 (15)0.0281 (14)0.0225 (14)0.0027 (11)0.0033 (11)0.0061 (11)
O130.0379 (13)0.0428 (13)0.0266 (12)−0.0125 (10)0.0073 (10)0.0053 (9)
C160.0213 (13)0.0231 (13)0.0209 (13)0.0013 (10)0.0003 (10)0.0029 (10)
C270.0181 (13)0.0237 (13)0.0257 (14)0.0037 (10)−0.0019 (10)0.0016 (10)
C140.0182 (13)0.0282 (14)0.0262 (14)−0.0020 (10)−0.0003 (10)0.0047 (11)
C240.0195 (14)0.0326 (15)0.0269 (15)−0.0001 (11)0.0056 (11)0.0083 (11)
C260.0130 (12)0.0209 (12)0.0262 (14)0.0049 (9)0.0010 (10)0.0030 (10)
C250.0148 (13)0.0294 (14)0.0329 (16)−0.0023 (10)0.0021 (11)0.0060 (12)
C130.0146 (12)0.0234 (12)0.0226 (13)0.0047 (9)0.0030 (9)0.0054 (9)
C150.0225 (14)0.0310 (15)0.0263 (15)−0.0040 (11)−0.0045 (11)0.0000 (11)
Li10.017 (2)0.037 (3)0.034 (3)−0.002 (2)0.000 (2)0.004 (2)
Li20.017 (2)0.038 (3)0.029 (3)0.001 (2)0.0007 (19)0.002 (2)
Li30.030 (3)0.034 (3)0.018 (2)−0.002 (2)0.0002 (19)0.0032 (19)
N10.0311 (15)0.0461 (17)0.0335 (16)−0.0010 (12)−0.0028 (12)0.0021 (13)
N20.0354 (17)0.054 (2)0.0300 (16)−0.0107 (14)−0.0003 (12)0.0093 (14)
O10.0334 (13)0.0375 (13)0.0298 (13)−0.0042 (10)0.0006 (10)0.0012 (10)
O30.0443 (16)0.0570 (17)0.0426 (15)0.0141 (13)0.0074 (12)0.0186 (13)
O20.0270 (14)0.0605 (18)0.0490 (17)0.0069 (12)0.0068 (12)−0.0063 (14)
O140.0470 (15)0.0435 (14)0.0210 (11)−0.0076 (11)−0.0008 (10)0.0006 (9)
O21—C271.248 (4)C24—H240.9300
O12—C171.254 (3)C26—C251.382 (4)
O12—Li1i2.088 (6)C25—H250.9300
N21—N221.337 (3)C15—H150.9300
N21—C261.341 (3)Li1—N112.260 (6)
O11—C171.252 (4)Li1—O131.982 (6)
O11—Li1ii2.010 (6)Li1—O11ii2.010 (5)
N11—N121.329 (3)Li1—O12i2.088 (6)
N11—C161.334 (4)Li1—N12ii2.144 (6)
O23—C281.256 (4)Li2—O211.990 (6)
O22—C271.246 (4)Li2—N212.186 (6)
O22—Li2iii2.097 (6)Li2—O24iv1.995 (6)
N12—C131.331 (4)Li2—O22v2.097 (6)
N12—Li1ii2.144 (6)Li2—N22iv2.276 (6)
O24—C281.245 (4)Li3—O141.893 (5)
O24—Li2iv1.995 (6)Li3—O21.938 (6)
C23—N221.335 (4)Li3—O11.952 (6)
C23—C241.393 (4)Li3—O231.934 (6)
C23—C281.520 (4)N1—N21.430 (4)
C17—C131.521 (4)N1—H10.88 (2)
N22—Li2iv2.276 (6)N1—H20.897 (19)
C18—O141.240 (4)N2—H40.90 (2)
C18—O131.251 (4)N2—H50.92 (2)
C18—C161.511 (4)N2—H30.89 (2)
C16—C151.396 (4)O1—H110.82 (5)
C27—C261.522 (4)O1—H120.93 (5)
C14—C151.364 (4)O3—H310.835 (19)
C14—C131.395 (4)O3—H320.814 (19)
C14—H140.9300O2—H220.83 (2)
C24—C251.367 (4)O2—H210.82 (2)
C27—O21—Li2120.1 (3)N12—C13—C14123.2 (2)
C17—O12—Li1i117.5 (2)N12—C13—C17113.8 (2)
N22—N21—C26119.4 (2)C14—C13—C17122.9 (2)
N22—N21—Li2129.1 (2)C14—C15—C16117.6 (3)
C26—N21—Li2110.7 (2)C14—C15—H15121.2
C17—O11—Li1ii117.2 (2)C16—C15—H15121.2
N12—N11—C16119.5 (2)O13—Li1—O11ii98.3 (3)
N12—N11—Li1129.9 (2)O13—Li1—O12i103.8 (3)
C16—N11—Li1108.1 (2)O11ii—Li1—O12i108.2 (3)
C28—O23—Li3126.2 (3)O13—Li1—N12ii153.2 (3)
C27—O22—Li2iii116.2 (2)O11ii—Li1—N12ii79.1 (2)
N11—N12—C13119.7 (2)O12i—Li1—N12ii102.3 (2)
N11—N12—Li1ii128.2 (2)O13—Li1—N1176.6 (2)
C13—N12—Li1ii110.9 (2)O11ii—Li1—N11155.5 (3)
C28—O24—Li2iv119.8 (2)O12i—Li1—N1196.3 (2)
N22—C23—C24123.0 (3)N12ii—Li1—N1194.7 (2)
N22—C23—C28114.7 (2)O21—Li2—O24iv100.7 (3)
C24—C23—C28122.3 (2)O21—Li2—O22v106.4 (3)
O11—C17—O12126.9 (3)O24iv—Li2—O22v101.2 (2)
O11—C17—C13116.8 (2)O21—Li2—N2177.79 (19)
O12—C17—C13116.3 (3)O24iv—Li2—N21153.1 (3)
C23—N22—N21119.3 (2)O22v—Li2—N21105.0 (3)
C23—N22—Li2iv107.7 (2)O21—Li2—N22iv156.5 (3)
N21—N22—Li2iv130.4 (2)O24iv—Li2—N22iv76.4 (2)
O24—C28—O23126.5 (3)O22v—Li2—N22iv97.0 (2)
O24—C28—C23117.1 (3)N21—Li2—N22iv94.3 (2)
O23—C28—C23116.5 (3)O14—Li3—O23110.5 (3)
O14—C18—O13126.7 (3)O14—Li3—O2126.1 (3)
O14—C18—C16116.8 (3)O23—Li3—O2101.0 (3)
O13—C18—C16116.4 (3)O14—Li3—O199.9 (3)
C18—O13—Li1120.8 (2)O23—Li3—O1121.7 (3)
N11—C16—C15122.9 (3)O2—Li3—O199.0 (3)
N11—C16—C18114.9 (2)N2—N1—H1103 (4)
C15—C16—C18122.2 (3)N2—N1—H2100 (3)
O22—C27—O21127.7 (3)H1—N1—H2118 (5)
O22—C27—C26116.6 (3)N1—N2—H4103 (4)
O21—C27—C26115.8 (2)N1—N2—H5109 (5)
C15—C14—C13117.0 (3)H4—N2—H5112 (6)
C15—C14—H14121.5N1—N2—H3111 (4)
C13—C14—H14121.5H4—N2—H3112 (6)
C25—C24—C23117.7 (3)H5—N2—H3109 (6)
C25—C24—H24121.2Li3—O1—H11114 (4)
C23—C24—H24121.2Li3—O1—H12113 (3)
N21—C26—C25123.3 (3)H11—O1—H12113 (5)
N21—C26—C27113.8 (2)H31—O3—H32109 (3)
C25—C26—C27122.9 (2)Li3—O2—H22129 (5)
C24—C25—C26117.4 (3)Li3—O2—H21121 (5)
C24—C25—H25121.3H22—O2—H21100 (6)
C26—C25—H25121.3C18—O14—Li3143.4 (3)
D—H···AD—HH···AD···AD—H···A
N2—H3···O24vi0.89 (2)1.95 (2)2.824 (4)168 (6)
N2—H5···O3iii0.92 (2)1.82 (3)2.709 (5)162 (7)
N1—H2···O23vii0.90 (2)2.07 (2)2.965 (4)175 (5)
N2—H4···O13vi0.90 (2)1.96 (5)2.716 (4)140 (6)
N1—H1···O11viii0.88 (2)2.12 (2)2.981 (4)167 (5)
O2—H21···O1v0.82 (2)1.94 (3)2.737 (4)163 (7)
O2—H22···O22ix0.83 (2)2.07 (3)2.868 (4)162 (7)
O3—H31···O12viii0.84 (2)1.93 (2)2.741 (4)164 (5)
O3—H32···O140.81 (2)2.11 (3)2.875 (4)156 (5)
O1—H12···O21ix0.93 (5)1.76 (5)2.684 (3)174 (4)
O1—H11···N10.82 (5)2.00 (5)2.814 (4)171 (5)
Table 1

Selected bond lengths (Å)

Li1—N112.260 (6)
Li1—O131.982 (6)
Li1—O11i2.010 (5)
Li1—O12ii2.088 (6)
Li1—N12i2.144 (6)
Li2—O211.990 (6)
Li2—N212.186 (6)
Li2—O24iii1.995 (6)
Li2—O22iv2.097 (6)
Li2—N22iii2.276 (6)
Li3—O141.893 (5)
Li3—O21.938 (6)
Li3—O11.952 (6)
Li3—O231.934 (6)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H3⋯O24v0.89 (2)1.95 (2)2.824 (4)168 (6)
N2—H5⋯O3vi0.92 (2)1.82 (3)2.709 (5)162 (7)
N1—H2⋯O23vii0.90 (2)2.07 (2)2.965 (4)175 (5)
N2—H4⋯O13v0.90 (2)1.96 (5)2.716 (4)140 (6)
N1—H1⋯O11viii0.88 (2)2.12 (2)2.981 (4)167 (5)
O2—H21⋯O1iv0.82 (2)1.94 (3)2.737 (4)163 (7)
O2—H22⋯O22ix0.83 (2)2.07 (3)2.868 (4)162 (7)
O3—H31⋯O12viii0.84 (2)1.93 (2)2.741 (4)164 (5)
O3—H32⋯O140.81 (2)2.11 (3)2.875 (4)156 (5)
O1—H12⋯O21ix0.93 (5)1.76 (5)2.684 (3)174 (4)
O1—H11⋯N10.82 (5)2.00 (5)2.814 (4)171 (5)

Symmetry codes: (iv) ; (v) ; (vi) ; (vii) ; (viii) ; (ix) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Hydrazinediium bis-(6-carboxy-pyridazine-3-carboxyl-ate) dihydrate.

Authors:  Wojciech Starosta; Janusz Leciejewicz
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-01-16

3.  Bis[[(6-carb-oxy-pyridazine-3-carboxyl-ato-κN,O)lithium]-μ-penta-hydrogen-dioxy-gen(1+)].

Authors:  Wojciech Starosta; Janusz Leciejewicz
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-09

4.  Bis(hydrazin-1-ium) bis-(μ(2)-pyridazine-3,6-dicarboxyl-ato)bis-(aqua-lithiate) octa-aqua-bis-(μ(3)-pyridazine-3,6-dicarboxyl-ato)tetra-lithium.

Authors:  Wojciech Starosta; Janusz Leciejewicz
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-24

5.  catena-Poly[[μ(2)-aqua-diaqua-bis-(μ(4)-pyridazine-3,6-dicarboxyl-ato)tetra-lithium] monohydrate].

Authors:  Wojciech Starosta; Janusz Leciejewicz
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-30
  5 in total

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