| Literature DB >> 21588805 |
Wojciech Starosta1, Janusz Leciejewicz.
Abstract
The structure of the title compound, [Li(C(6)H(3)N(2)O(4))(2)(H(5)O(2))], is composed of centrosymmetric monomers in which an Li(I) ion is chelated by two N,O-bonding groups donated by two ligands. The Li(I) ion and both ligand mol-ecules are coplanar [r.m.s. deviation 0.0047 (2) Å] and water O atoms are in the axial positions. The second carboxyl group of each ligand remains protonated. An additional H atom, located between adjacent coordinated water mol-ecules and observed on Fourier maps, maintains the charge balance within the monomers and bridges them by short symmetric hydrogen bonds of 2.518 (3) Å to form catenated ribbons. The monomers also inter-act via hydrogen bonds in which water and carboxyl O atoms act as donors.Entities:
Year: 2010 PMID: 21588805 PMCID: PMC3009182 DOI: 10.1107/S1600536810039176
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Li(C6H3N2O4)2(H5O2)] | |
| Monoclinic, | Mo |
| Cell parameters from 25 reflections | |
| θ = 6–15° | |
| µ = 0.15 mm−1 | |
| β = 111.60 (3)° | |
| Plate, colourless | |
| 0.42 × 0.39 × 0.07 mm |
| Kuma KM-4 four-circle diffractometer | 1207 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 30.1°, θmin = 1.7° |
| profile data from ω/2θ–scans | |
| Absorption correction: analytical ( | |
| 4355 measured reflections | 3 standard reflections every 200 reflections |
| 2181 independent reflections | intensity decay: 0.8% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2181 reflections | (Δ/σ)max < 0.001 |
| 135 parameters | Δρmax = 0.40 e Å−3 |
| 3 restraints | Δρmin = −0.31 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| N1 | 0.1189 (4) | 0.08134 (5) | 0.4137 (2) | 0.0216 (3) | |
| O1 | −0.1491 (4) | 0.04967 (4) | 0.6760 (2) | 0.0308 (3) | |
| O3 | 0.5111 (3) | 0.11620 (5) | 0.0040 (2) | 0.0288 (3) | |
| O2 | −0.2209 (3) | 0.13593 (5) | 0.7509 (2) | 0.0297 (3) | |
| C5 | 0.2683 (4) | 0.14735 (6) | 0.2292 (3) | 0.0208 (4) | |
| N2 | 0.2452 (4) | 0.09550 (5) | 0.2750 (2) | 0.0215 (3) | |
| C2 | 0.0209 (4) | 0.11977 (6) | 0.5110 (2) | 0.0196 (3) | |
| C7 | −0.1279 (4) | 0.10016 (6) | 0.6606 (2) | 0.0208 (4) | |
| C8 | 0.4088 (4) | 0.15946 (6) | 0.0675 (3) | 0.0226 (4) | |
| O4 | 0.4208 (4) | 0.20499 (4) | 0.0057 (2) | 0.0405 (4) | |
| C4 | 0.1727 (5) | 0.18911 (6) | 0.3287 (3) | 0.0264 (4) | |
| H4 | 0.1930 | 0.2253 | 0.2965 | 0.032* | |
| C3 | 0.0479 (5) | 0.17513 (6) | 0.4753 (3) | 0.0253 (4) | |
| H3 | −0.0165 | 0.2014 | 0.5486 | 0.030* | |
| Li1 | 0.0000 | 0.0000 | 0.5000 | 0.0588 (19) | |
| O6 | 0.4949 (4) | −0.00562 (5) | 0.8091 (2) | 0.0415 (4) | |
| H61 | 0.606 (6) | 0.0181 (8) | 0.792 (4) | 0.062* | |
| H62 | 0.558 (6) | −0.0364 (7) | 0.807 (4) | 0.062* | |
| H31 | 0.617 (7) | 0.1250 (8) | −0.089 (4) | 0.042 (7)* | |
| H63 | 0.5000 | 0.0000 | 1.0000 | 0.080 (14)* |
| N1 | 0.0282 (8) | 0.0198 (6) | 0.0270 (7) | 0.0007 (5) | 0.0221 (6) | 0.0017 (5) |
| O1 | 0.0433 (9) | 0.0227 (5) | 0.0420 (7) | −0.0012 (5) | 0.0339 (6) | 0.0023 (5) |
| O3 | 0.0415 (9) | 0.0237 (5) | 0.0362 (7) | 0.0014 (5) | 0.0319 (6) | 0.0020 (5) |
| O2 | 0.0401 (9) | 0.0289 (6) | 0.0350 (7) | 0.0004 (5) | 0.0311 (5) | −0.0016 (4) |
| C5 | 0.0247 (9) | 0.0204 (6) | 0.0235 (7) | −0.0007 (7) | 0.0160 (6) | 0.0004 (5) |
| N2 | 0.0295 (9) | 0.0200 (5) | 0.0245 (7) | 0.0004 (6) | 0.0211 (6) | 0.0018 (5) |
| C2 | 0.0234 (9) | 0.0205 (6) | 0.0215 (7) | −0.0009 (6) | 0.0162 (6) | 0.0000 (5) |
| C7 | 0.0215 (9) | 0.0260 (7) | 0.0221 (7) | −0.0010 (6) | 0.0162 (6) | 0.0000 (5) |
| C8 | 0.0289 (10) | 0.0216 (7) | 0.0243 (7) | −0.0016 (6) | 0.0182 (7) | −0.0013 (5) |
| O4 | 0.0689 (11) | 0.0230 (6) | 0.0506 (8) | −0.0029 (7) | 0.0465 (7) | 0.0046 (5) |
| C4 | 0.0384 (12) | 0.0187 (6) | 0.0308 (9) | 0.0008 (7) | 0.0229 (8) | 0.0013 (6) |
| C3 | 0.0352 (11) | 0.0195 (7) | 0.0312 (9) | 0.0001 (7) | 0.0239 (7) | −0.0029 (6) |
| Li1 | 0.108 (6) | 0.0194 (19) | 0.095 (4) | −0.006 (3) | 0.091 (4) | −0.001 (2) |
| O6 | 0.0709 (13) | 0.0209 (6) | 0.0542 (9) | −0.0033 (6) | 0.0484 (8) | 0.0009 (5) |
| N1—N2 | 1.327 (2) | C2—C7 | 1.507 (3) |
| N1—C2 | 1.330 (2) | C8—O4 | 1.2024 (19) |
| N1—Li1 | 2.2194 (14) | C4—C3 | 1.366 (3) |
| O1—C7 | 1.2558 (18) | C4—H4 | 0.9300 |
| O1—Li1 | 2.0019 (15) | C3—H3 | 0.9300 |
| O3—C8 | 1.311 (2) | Li1—O1i | 2.0020 (15) |
| O3—H31 | 0.96 (4) | Li1—N1i | 2.2195 (14) |
| O2—C7 | 1.241 (2) | Li1—O6 | 2.535 (2) |
| C5—N2 | 1.3274 (19) | Li1—O6i | 2.535 (2) |
| C5—C4 | 1.392 (2) | O6—H61 | 0.836 (18) |
| C5—C8 | 1.498 (3) | O6—H62 | 0.822 (16) |
| C2—C3 | 1.399 (2) | O6—H63 | 1.2600 |
| N2—N1—C2 | 119.32 (13) | C2—C3—H3 | 121.3 |
| N2—N1—Li1 | 130.38 (11) | O1—Li1—O1i | 180.0 |
| C2—N1—Li1 | 110.08 (12) | O1—Li1—N1 | 77.50 (6) |
| C7—O1—Li1 | 119.98 (14) | O1i—Li1—N1 | 102.50 (6) |
| C8—O3—H31 | 112.3 (14) | O1—Li1—N1i | 102.50 (6) |
| N2—C5—C4 | 122.17 (19) | O1i—Li1—N1i | 77.50 (6) |
| N2—C5—C8 | 117.00 (16) | N1—Li1—N1i | 180.0 |
| C4—C5—C8 | 120.82 (14) | O1—Li1—O6 | 90.68 (6) |
| C5—N2—N1 | 120.70 (16) | O1i—Li1—O6 | 89.32 (6) |
| N1—C2—C3 | 122.66 (18) | N1—Li1—O6 | 89.54 (5) |
| N1—C2—C7 | 115.88 (13) | N1i—Li1—O6 | 90.46 (5) |
| C3—C2—C7 | 121.45 (17) | O1—Li1—O6i | 89.32 (6) |
| O2—C7—O1 | 127.48 (19) | O1i—Li1—O6i | 90.68 (6) |
| O2—C7—C2 | 116.05 (14) | N1—Li1—O6i | 90.46 (5) |
| O1—C7—C2 | 116.45 (16) | N1i—Li1—O6i | 89.54 (5) |
| O4—C8—O3 | 125.3 (2) | O6—Li1—O6i | 180.0 |
| O4—C8—C5 | 121.33 (18) | Li1—O6—H61 | 109.5 (17) |
| O3—C8—C5 | 113.34 (14) | Li1—O6—H62 | 106.8 (17) |
| C3—C4—C5 | 117.69 (15) | H61—O6—H62 | 112 (3) |
| C3—C4—H4 | 121.2 | Li1—O6—H63 | 117.00 |
| C5—C4—H4 | 121.2 | H61—O6—H63 | 107.00 |
| C4—C3—C2 | 117.40 (17) | H62—O6—H63 | 104.00 |
| C4—C3—H3 | 121.3 |
| H··· | ||||
| O6—H63···O6ii | 1.26 | 1.26 | 2.518 (3) | 180 |
| O6—H61···O1iii | 0.84 (2) | 1.82 (2) | 2.608 (2) | 157 (3) |
| O3—H31···O2iv | 0.96 (4) | 1.56 (4) | 2.525 (2) | 176 (2) |
| O6—H62···O3v | 0.82 (2) | 2.42 (2) | 2.9957 (19) | 128 (3) |
| O6—H62···N2v | 0.82 (2) | 1.93 (2) | 2.712 (2) | 159 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O6—H63⋯O6i | 1.26 | 1.26 | 2.518 (3) | 180 |
| O6—H61⋯O1ii | 0.84 (2) | 1.82 (2) | 2.608 (2) | 157 (3) |
| O3—H31⋯O2iii | 0.96 (4) | 1.56 (4) | 2.525 (2) | 176 (2) |
| O6—H62⋯O3iv | 0.82 (2) | 2.42 (2) | 2.9957 (19) | 128 (3) |
| O6—H62⋯N2iv | 0.82 (2) | 1.93 (2) | 2.712 (2) | 159 (3) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .