Literature DB >> 22582376

Genome sequences of the ethanol-tolerant Lactobacillus vini strains LMG 23202T and JP7.8.9.

Brígida Thaís Luckwu de Lucena1, Genivaldo G Z Silva, Billy Manoel Dos Santos, Graciela M Dias, Gilda Rose S Amaral, Ana Paula B Moreira, Marcos Antônio de Morais Júnior, Bas E Dutilh, Robert A Edwards, Valdir Balbino, Cristiane C Thompson, Fabiano L Thompson.   

Abstract

We report on the genome sequences of Lactobacillus vini type strain LMG 23202(T) (DSM 20605) (isolated from fermenting grape musts in Spain) and the industrial strain L. vini JP7.8.9 (isolated from a bioethanol plant in northeast Brazil). All contigs were assembled using gsAssembler, and genes were predicted and annotated using Rapid Annotation using Subsystem Technology (RAST). The identified genome sequence of LMG 23202(T) had 2.201.333 bp, 37.6% G+C, and 1,833 genes, whereas the identified genome sequence of JP7.8.9 had 2.301.037 bp, 37.8% G+C, and 1,739 genes. The gene repertoire of the species L. vini offers promising opportunities for biotechnological applications.

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Year:  2012        PMID: 22582376      PMCID: PMC3370616          DOI: 10.1128/JB.00446-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  6 in total

1.  Genome sequencing in microfabricated high-density picolitre reactors.

Authors:  Marcel Margulies; Michael Egholm; William E Altman; Said Attiya; Joel S Bader; Lisa A Bemben; Jan Berka; Michael S Braverman; Yi-Ju Chen; Zhoutao Chen; Scott B Dewell; Lei Du; Joseph M Fierro; Xavier V Gomes; Brian C Godwin; Wen He; Scott Helgesen; Chun Heen Ho; Chun He Ho; Gerard P Irzyk; Szilveszter C Jando; Maria L I Alenquer; Thomas P Jarvie; Kshama B Jirage; Jong-Bum Kim; James R Knight; Janna R Lanza; John H Leamon; Steven M Lefkowitz; Ming Lei; Jing Li; Kenton L Lohman; Hong Lu; Vinod B Makhijani; Keith E McDade; Michael P McKenna; Eugene W Myers; Elizabeth Nickerson; John R Nobile; Ramona Plant; Bernard P Puc; Michael T Ronan; George T Roth; Gary J Sarkis; Jan Fredrik Simons; John W Simpson; Maithreyan Srinivasan; Karrie R Tartaro; Alexander Tomasz; Kari A Vogt; Greg A Volkmer; Shally H Wang; Yong Wang; Michael P Weiner; Pengguang Yu; Richard F Begley; Jonathan M Rothberg
Journal:  Nature       Date:  2005-07-31       Impact factor: 49.962

Review 2.  How microbes tolerate ethanol and butanol.

Authors:  Siqing Liu; Nasib Qureshi
Journal:  N Biotechnol       Date:  2009-07-02       Impact factor: 5.079

3.  Short- and long-term adaptation to ethanol stress and its cross-protective consequences in Lactobacillus plantarum.

Authors:  Hermien van Bokhorst-van de Veen; Tjakko Abee; Marcel Tempelaars; Peter A Bron; Michiel Kleerebezem; Maria L Marco
Journal:  Appl Environ Microbiol       Date:  2011-06-24       Impact factor: 4.792

4.  Lactobacillus vini sp. nov., a wine lactic acid bacterium homofermentative for pentoses.

Authors:  Ana María Rodas; Empar Chenoll; M Carmen Macián; Sergi Ferrer; Isabel Pardo; Rosa Aznar
Journal:  Int J Syst Evol Microbiol       Date:  2006-03       Impact factor: 2.747

5.  Diversity of lactic acid bacteria of the bioethanol process.

Authors:  Brigida T L Lucena; Billy M dos Santos; João Ls Moreira; Ana Paula B Moreira; Alvaro C Nunes; Vasco Azevedo; Anderson Miyoshi; Fabiano L Thompson; Marcos Antonio de Morais
Journal:  BMC Microbiol       Date:  2010-11-23       Impact factor: 3.605

6.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969

  6 in total
  2 in total

1.  Characterization of pro-inflammatory flagellin proteins produced by Lactobacillus ruminis and related motile Lactobacilli.

Authors:  B Anne Neville; Brian M Forde; Marcus J Claesson; Trevor Darby; Avril Coghlan; Kenneth Nally; R Paul Ross; Paul W O'Toole
Journal:  PLoS One       Date:  2012-07-10       Impact factor: 3.240

2.  Sequencing at sea: challenges and experiences in Ion Torrent PGM sequencing during the 2013 Southern Line Islands Research Expedition.

Authors:  Yan Wei Lim; Daniel A Cuevas; Genivaldo Gueiros Z Silva; Kristen Aguinaldo; Elizabeth A Dinsdale; Andreas F Haas; Mark Hatay; Savannah E Sanchez; Linda Wegley-Kelly; Bas E Dutilh; Timothy T Harkins; Clarence C Lee; Warren Tom; Stuart A Sandin; Jennifer E Smith; Brian Zgliczynski; Mark J A Vermeij; Forest Rohwer; Robert A Edwards
Journal:  PeerJ       Date:  2014-08-19       Impact factor: 2.984

  2 in total

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