Literature DB >> 22582372

Complete genome sequence of the fruiting myxobacterium Corallococcus coralloides DSM 2259.

Stuart Huntley1, Ye Zhang, Anke Treuner-Lange, Susanne Kneip, Christoph W Sensen, Lotte Søgaard-Andersen.   

Abstract

Corallococcus coralloides, like most other myxobacteria, undergoes a developmental program culminating in the formation of fruiting bodies. C. coralloides fruiting bodies are morphologically distinct from those of other fruiting myxobacteria for which full-length genome sequences are available. The genome sequence of the 10.0-Mb C. coralloides genome is presented herein.

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Year:  2012        PMID： 22582372      PMCID： PMC3370603          DOI： 10.1128/JB.00397-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  14 in total

Review 1.  The ecology of the myxobacteria.

Authors:  H Reichenbach
Journal:  Environ Microbiol       Date:  1999-02       Impact factor: 5.491

Review 2.  Biology and global distribution of myxobacteria in soils.

Authors:  W Dawid
Journal:  FEMS Microbiol Rev       Date:  2000-10       Impact factor: 16.408

3.  Fully automated genome analysis that reflects user needs and preferences. A detailed introduction to the MAGPIE system architecture.

Authors:  T Gaasterland; C W Sensen
Journal:  Biochimie       Date:  1996       Impact factor: 4.079

4.  Evolution of sensory complexity recorded in a myxobacterial genome.

Authors:  B S Goldman; W C Nierman; D Kaiser; S C Slater; A S Durkin; J A Eisen; J Eisen; C M Ronning; W B Barbazuk; M Blanchard; C Field; C Halling; G Hinkle; O Iartchuk; H S Kim; C Mackenzie; R Madupu; N Miller; A Shvartsbeyn; S A Sullivan; M Vaudin; R Wiegand; H B Kaplan
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-02       Impact factor: 11.205

5.  Genome sequence of the halotolerant marine bacterium Myxococcus fulvus HW-1.

Authors:  Zhi-Feng Li; Xia Li; Hong Liu; Xin Liu; Kui Han; Zhi-Hong Wu; Wei Hu; Fei-Fei Li; Yue-Zhong Li
Journal:  J Bacteriol       Date:  2011-09       Impact factor: 3.490

Review 6.  Extracellular biology of Myxococcus xanthus.

Authors:  Anna Konovalova; Tobias Petters; Lotte Søgaard-Andersen
Journal:  FEMS Microbiol Rev       Date:  2009-10-20       Impact factor: 16.408

7.  Complete genome sequence of Haliangium ochraceum type strain (SMP-2).

Authors:  Natalia Ivanova; Chris Daum; Elke Lang; Birte Abt; Markus Kopitz; Elizabeth Saunders; Alla Lapidus; Susan Lucas; Tijana Glavina Del Rio; Matt Nolan; Hope Tice; Alex Copeland; Jan-Fang Cheng; Feng Chen; David Bruce; Lynne Goodwin; Sam Pitluck; Konstantinos Mavromatis; Amrita Pati; Natalia Mikhailova; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; John C Detter; Thomas Brettin; Manfred Rohde; Markus Göker; Jim Bristow; Victor Markowitz; Jonathan A Eisen; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk
Journal:  Stand Genomic Sci       Date:  2010-01-28

8.  BASys: a web server for automated bacterial genome annotation.

Authors:  Gary H Van Domselaar; Paul Stothard; Savita Shrivastava; Joseph A Cruz; AnChi Guo; Xiaoli Dong; Paul Lu; Duane Szafron; Russ Greiner; David S Wishart
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

9.  Aggressive assembly of pyrosequencing reads with mates.

Authors:  Jason R Miller; Arthur L Delcher; Sergey Koren; Eli Venter; Brian P Walenz; Anushka Brownley; Justin Johnson; Kelvin Li; Clark Mobarry; Granger Sutton
Journal:  Bioinformatics       Date:  2008-10-24       Impact factor: 6.937

10.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
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  24 in total

1.  Intra- and interprotein phosphorylation between two-hybrid histidine kinases controls Myxococcus xanthus developmental progression.

Authors:  Andreas Schramm; Bongsoo Lee; Penelope I Higgs
Journal:  J Biol Chem       Date:  2012-06-01       Impact factor: 5.157

2.  Functional Analysis of a Novel β-(1,3)-Glucanase from Corallococcus sp. Strain EGB Containing a Fascin-Like Module.

Authors:  Jie Zhou; Zhoukun Li; Jiale Wu; Lifeng Li; Ding Li; Xianfeng Ye; Xue Luo; Yan Huang; Zhongli Cui; Hui Cao
Journal:  Appl Environ Microbiol       Date:  2017-08-01       Impact factor: 4.792

3.  Polyketide synthase gene diversity within the microbiome of the sponge Arenosclera brasiliensis, endemic to the Southern Atlantic Ocean.

Authors:  Amaro E Trindade-Silva; Cintia P J Rua; Bruno G N Andrade; Ana Carolina Paulo Vicente; Genivaldo G Z Silva; Roberto G S Berlinck; Fabiano L Thompson
Journal:  Appl Environ Microbiol       Date:  2012-12-28       Impact factor: 4.792

4.  AmyM, a Novel Maltohexaose-Forming α-Amylase from Corallococcus sp. strain EGB.

Authors:  Zhoukun Li; Jiale Wu; Biying Zhang; Fei Wang; Xianfeng Ye; Yan Huang; Qiang Huang; Zhongli Cui
Journal:  Appl Environ Microbiol       Date:  2015-01-09       Impact factor: 4.792

5.  Bacterial community structure and bacterial isolates having antimicrobial potential in shrimp pond aquaculture.

Authors:  Sardar Ali; Jianmin Xie; Sahib Zada; Zhong Hu; Yueling Zhang; Runlin Cai; Hui Wang
Journal:  AMB Express       Date:  2022-06-23       Impact factor: 4.126

6.  Novel Maltogenic Amylase CoMA from Corallococcus sp. Strain EGB Catalyzes the Conversion of Maltooligosaccharides and Soluble Starch to Maltose.

Authors:  Jie Zhou; Zhoukun Li; Han Zhang; Jiale Wu; Xianfeng Ye; Weiliang Dong; Min Jiang; Yan Huang; Zhongli Cui
Journal:  Appl Environ Microbiol       Date:  2018-07-02       Impact factor: 4.792

7.  Comparative Genomics of Myxobacterial Chemosensory Systems.

Authors:  Gaurav Sharma; Indu Khatri; Srikrishna Subramanian
Journal:  J Bacteriol       Date:  2018-01-10       Impact factor: 3.490

8.  A response regulator interfaces between the Frz chemosensory system and the MglA/MglB GTPase/GAP module to regulate polarity in Myxococcus xanthus.

Authors:  Daniela Keilberg; Kristin Wuichet; Florian Drescher; Lotte Søgaard-Andersen
Journal:  PLoS Genet       Date:  2012-09-13       Impact factor: 5.917

9.  Complete genome sequence of Myxococcus stipitatus strain DSM 14675, a fruiting myxobacterium.

Authors:  Stuart Huntley; Susanne Kneip; Anke Treuner-Lange; Lotte Søgaard-Andersen
Journal:  Genome Announc       Date:  2013-03-21

10.  Evolution and diversity of the Ras superfamily of small GTPases in prokaryotes.

Authors:  Kristin Wuichet; Lotte Søgaard-Andersen
Journal:  Genome Biol Evol       Date:  2014-12-04       Impact factor: 3.416
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