Literature DB >> 22562933

A hyperactive transposase of the maize transposable element activator (Ac).

Katina Lazarow1, My-Linh Du, Ruth Weimer, Reinhard Kunze.   

Abstract

Activator/Dissociation (Ac/Ds) transposable elements from maize are widely used as insertional mutagenesis and gene isolation tools in plants and more recently also in medaka and zebrafish. They are particularly valuable for plant species that are transformation-recalcitrant and have long generation cycles or large genomes with low gene densities. Ac/Ds transposition frequencies vary widely, however, and in some species they are too low for large-scale mutagenesis. We discovered a hyperactive Ac transposase derivative, AcTPase(4x), that catalyzes in the yeast Saccharomyces cerevisiae 100-fold more frequent Ds excisions than the wild-type transposase, whereas the reintegration frequency of excised Ds elements is unchanged (57%). Comparable to the wild-type transposase in plants, AcTPase(4x) catalyzes Ds insertion preferentially into coding regions and to genetically linked sites, but the mutant protein apparently has lost the weak bias of the wild-type protein for insertion sites with elevated guanine-cytosine content and nonrandom protein-DNA twist. AcTPase(4x) exhibits hyperactivity also in Arabidopsis thaliana where it effects a more than sixfold increase in Ds excision relative to wild-type AcTPase and thus may be useful to facilitate Ac/Ds-based insertion mutagenesis approaches.

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Year:  2012        PMID: 22562933      PMCID: PMC3389971          DOI: 10.1534/genetics.112.139642

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  43 in total

Review 1.  The hAT family: a versatile transposon group common to plants, fungi, animals, and man.

Authors:  F Kempken; F Windhofer
Journal:  Chromosoma       Date:  2001-04       Impact factor: 4.316

2.  Transposition of hAT elements links transposable elements and V(D)J recombination.

Authors:  Liqin Zhou; Rupak Mitra; Peter W Atkinson; Alison Burgess Hickman; Fred Dyda; Nancy L Craig
Journal:  Nature       Date:  2004-12-23       Impact factor: 49.962

3.  In vivo aggregation of maize Activator (Ac) transposase in nuclei of maize endosperm and Petunia protoplasts.

Authors:  M Heinlein; T Brattig; R Kunze
Journal:  Plant J       Date:  1994-05       Impact factor: 6.417

4.  Effective generation of transgenic reporter and gene trap lines of the medaka (Oryzias latipes) using the Ac/Ds transposon system.

Authors:  Alexander Froschauer; David Sprott; Franziska Gerwien; Yvonne Henker; Franziska Rudolph; Frank Pfennig; Herwig O Gutzeit
Journal:  Transgenic Res       Date:  2011-04-30       Impact factor: 2.788

5.  An efficient method for dispersing Ds elements in the barley genome as a tool for determining gene function.

Authors:  T Koprek; D McElroy; J Louwerse; R Williams-Carrier; P G Lemaux
Journal:  Plant J       Date:  2000-10       Impact factor: 6.417

6.  Transposition of maize Ac/Ds transposable elements in the yeast Saccharomyces cerevisiae.

Authors:  C F Weil; R Kunze
Journal:  Nat Genet       Date:  2000-10       Impact factor: 38.330

7.  Maize Ac/Ds transposon system leads to highly efficient germline transmission of transgenes in medaka (Oryzias latipes).

Authors:  Grace Hwee Boon Ng; Zhiyuan Gong
Journal:  Biochimie       Date:  2011-07-18       Impact factor: 4.079

8.  Transposase binding site methylation in the epigenetically inactivated Ac derivative Ds-cy.

Authors:  L Wang; R Kunze
Journal:  Plant J       Date:  1998-02       Impact factor: 6.417

9.  piggyBac can bypass DNA synthesis during cut and paste transposition.

Authors:  Rupak Mitra; Jennifer Fain-Thornton; Nancy L Craig
Journal:  EMBO J       Date:  2008-03-20       Impact factor: 11.598

10.  An Ac/Ds-mediated gene trap system for functional genomics in barley.

Authors:  Katina Lazarow; Stephanie Lütticke
Journal:  BMC Genomics       Date:  2009-01-29       Impact factor: 3.969

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  12 in total

1.  Transposition of a rice Mutator-like element in the yeast Saccharomyces cerevisiae.

Authors:  Dongyan Zhao; Ann Ferguson; Ning Jiang
Journal:  Plant Cell       Date:  2015-01-13       Impact factor: 11.277

2.  Vast potential for using the piggyBac transposon to engineer transgenic plants at specific genomic locations.

Authors:  Eric T Johnson; Jesse B Owens; Stefan Moisyadi
Journal:  Bioengineered       Date:  2016       Impact factor: 3.269

3.  SAturated Transposon Analysis in Yeast (SATAY) for Deep Functional Mapping of Yeast Genomes.

Authors:  Agnès H Michel; Benoît Kornmann
Journal:  Methods Mol Biol       Date:  2022

4.  A small indel mutation in an anthocyanin transporter causes variegated colouration of peach flowers.

Authors:  Jun Cheng; Liao Liao; Hui Zhou; Chao Gu; Lu Wang; Yuepeng Han
Journal:  J Exp Bot       Date:  2015-09-10       Impact factor: 6.992

5.  Functional mapping of yeast genomes by saturated transposition.

Authors:  Agnès H Michel; Riko Hatakeyama; Philipp Kimmig; Meret Arter; Matthias Peter; Joao Matos; Claudio De Virgilio; Benoît Kornmann
Journal:  Elife       Date:  2017-05-08       Impact factor: 8.140

Review 6.  Host-transposon interactions: conflict, cooperation, and cooption.

Authors:  Rachel L Cosby; Ni-Chen Chang; Cédric Feschotte
Journal:  Genes Dev       Date:  2019-09-01       Impact factor: 11.361

7.  Comparing the utility of in vivo transposon mutagenesis approaches in yeast species to infer gene essentiality.

Authors:  Anton Levitan; Andrew N Gale; Emma K Dallon; Darby W Kozan; Kyle W Cunningham; Roded Sharan; Judith Berman
Journal:  Curr Genet       Date:  2020-07-17       Impact factor: 3.886

8.  Functional analysis of the catalytic triad of the hAT-family transposase TcBuster.

Authors:  Lauren E Woodard; Felisha M Williams; Isria C Jarrett; Matthew H Wilson
Journal:  Plasmid       Date:  2021-01-18       Impact factor: 3.466

9.  Maize Transposable Elements Ac/Ds as Insertion Mutagenesis Tools in Candida albicans.

Authors:  Kevin Mielich; Ella Shtifman-Segal; Julia C Golz; Guisheng Zeng; Yue Wang; Judith Berman; Reinhard Kunze
Journal:  G3 (Bethesda)       Date:  2018-03-28       Impact factor: 3.154

10.  Gene Essentiality Analyzed by In Vivo Transposon Mutagenesis and Machine Learning in a Stable Haploid Isolate of Candida albicans.

Authors:  Ella Shtifman Segal; Vladimir Gritsenko; Anton Levitan; Bhawna Yadav; Naama Dror; Jacob L Steenwyk; Yael Silberberg; Kevin Mielich; Antonis Rokas; Neil A R Gow; Reinhard Kunze; Roded Sharan; Judith Berman
Journal:  mBio       Date:  2018-10-30       Impact factor: 7.867

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