Literature DB >> 22561593

Reclassification of Thermoproteus neutrophilus Stetter and Zillig 1989 as Pyrobaculum neutrophilum comb. nov. based on phylogenetic analysis.

Patricia P Chan1, Aaron E Cozen1, Todd M Lowe1.   

Abstract

The hyperthermophilic crenarchaeon Thermoproteus neutrophilus V24Sta(T) was originally classified before sequence-based phylogenetic analysis became standard for bacterial taxonomy. Subsequent phylogenetic analyses by various groups have shown that strain V24Sta(T) groups more closely with strains of the genus Pyrobaculum than with those in the genus Thermoproteus. Based on phylogenetic comparison of rRNA gene sequences and ribosomal proteins, we propose that strain V24Sta(T) be reclassified as Pyrobaculum neutrophilum comb. nov., with the type strain V24Sta(T) ( = DSM 2338(T) = JCM 9278(T)). An emended description of the genus Pyrobaculum is also presented.

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Year:  2012        PMID: 22561593     DOI: 10.1099/ijs.0.043091-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  8 in total

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Authors:  Z J Jay; J P Beam; A Dohnalkova; R Lohmayer; B Bodle; B Planer-Friedrich; M Romine; W P Inskeep
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3.  The distribution, diversity, and importance of 16S rRNA gene introns in the order Thermoproteales.

Authors:  Zackary J Jay; William P Inskeep
Journal:  Biol Direct       Date:  2015-07-09       Impact factor: 4.540

4.  Phylogeny and Taxonomy of Archaea: A Comparison of the Whole-Genome-Based CVTree Approach with 16S rRNA Sequence Analysis.

Authors:  Guanghong Zuo; Zhao Xu; Bailin Hao
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5.  Pnserpin: A Novel Serine Protease Inhibitor from Extremophile Pyrobaculum neutrophilum.

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Journal:  Int J Mol Sci       Date:  2017-01-07       Impact factor: 5.923

6.  Complete genome sequence of Pyrobaculum oguniense.

Authors:  David L Bernick; Kevin Karplus; Lauren M Lui; Joanna K C Coker; Julie N Murphy; Patricia P Chan; Aaron E Cozen; Todd M Lowe
Journal:  Stand Genomic Sci       Date:  2012-07-20

7.  CVTree3 Web Server for Whole-genome-based and Alignment-free Prokaryotic Phylogeny and Taxonomy.

Authors:  Guanghong Zuo; Bailin Hao
Journal:  Genomics Proteomics Bioinformatics       Date:  2015-11-10       Impact factor: 7.691

8.  Methylation guide RNA evolution in archaea: structure, function and genomic organization of 110 C/D box sRNA families across six Pyrobaculum species.

Authors:  Lauren M Lui; Andrew V Uzilov; David L Bernick; Andrea Corredor; Todd M Lowe; Patrick P Dennis
Journal:  Nucleic Acids Res       Date:  2018-06-20       Impact factor: 16.971

  8 in total

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