Literature DB >> 2255907

How big is the universe of exons?

R L Dorit1, L Schoenbach, W Gilbert.   

Abstract

If genes have been assembled from exon subunits, the frequency with which exons are reused leads to an estimate of the size of the underlying exon universe. An exon database was constructed from available protein sequences, and homologous exons were identified on the basis of amino acid identity; statistically significant matches were determined by Monte Carlo methods. It is estimated that only 1000 to 7000 exons were needed to construct all proteins.

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Year:  1990        PMID: 2255907     DOI: 10.1126/science.2255907

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  68 in total

1.  Exon structure conservation despite low sequence similarity: a relic of dramatic events in evolution?

Authors:  M J Betts; R Guigó; P Agarwal; R B Russell
Journal:  EMBO J       Date:  2001-10-01       Impact factor: 11.598

Review 2.  Comparative genomics of plant chromosomes.

Authors:  A H Paterson; J E Bowers; M D Burow; X Draye; C G Elsik; C X Jiang; C S Katsar; T H Lan; Y R Lin; R Ming; R J Wright
Journal:  Plant Cell       Date:  2000-09       Impact factor: 11.277

3.  A screen for fast evolving genes from Drosophila.

Authors:  K J Schmid; D Tautz
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-02       Impact factor: 11.205

4.  Origins of genes: "big bang" or continuous creation?

Authors:  P K Keese; A Gibbs
Journal:  Proc Natl Acad Sci U S A       Date:  1992-10-15       Impact factor: 11.205

5.  On the structural and functional modularity of glycinamide ribonucleotide formyltransferases.

Authors:  Seung-Goo Lee; Stefan Lutz; Stephen J Benkovic
Journal:  Protein Sci       Date:  2003-10       Impact factor: 6.725

6.  On the use of the transmembrane domain of bacteriorhodopsin as a template for modeling the three-dimensional structure of guanine nucleotide-binding regulatory protein-coupled receptors.

Authors:  L Pardo; J A Ballesteros; R Osman; H Weinstein
Journal:  Proc Natl Acad Sci U S A       Date:  1992-05-01       Impact factor: 11.205

7.  Statistical analysis and prediction of the exonic structure of human genes.

Authors:  M S Gelfand
Journal:  J Mol Evol       Date:  1992-09       Impact factor: 2.395

8.  Experimental support for the evolution of symmetric protein architecture from a simple peptide motif.

Authors:  Jihun Lee; Michael Blaber
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-20       Impact factor: 11.205

9.  Phylogenetic continuum indicates "galaxies" in the protein universe: preliminary results on the natural group structures of proteins.

Authors:  I Ladunga
Journal:  J Mol Evol       Date:  1992-04       Impact factor: 2.395

10.  Exons encoding the highly conserved part of human glutaminyl-tRNA synthetase.

Authors:  E Kaiser; D Eberhard; R Knippers
Journal:  J Mol Evol       Date:  1992-01       Impact factor: 2.395

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