| Literature DB >> 22557997 |
Jochen Nuester1, Stefan Vogt, Matthew Newville, Adam B Kustka, Benjamin S Twining.
Abstract
Tclass="Chemical">he elementEntities:
Keywords: extended redfield ratio; iron; metallome; nickel; nitrogen fixation; vanadium; zinc
Year: 2012 PMID: 22557997 PMCID: PMC3337509 DOI: 10.3389/fmicb.2012.00150
Source DB: PubMed Journal: Front Microbiol ISSN: 1664-302X Impact factor: 5.640
Figure 1Location of sampling stations in the Sargasso Sea overlaid on a map of sea surface height anomaly as determined by remote sensing from Jason, TOPEX/Poseidon, Geosat Follow-On, ERS-2 and Envisat satellites (Colorado Center for Astrodynamics Research, University of Colorado at Boulder; Leben et al., . Bermuda can be seen to the northwest of the study region.
Summary of locations, sampling times, ambient temperature and salinity, and analyses performed.
| Station | Latitude | Longitude | Local date | Local time | Temperature | Salinity | ICP-MS/CHN | SXRF (GSECARS) | SXRF (2ID-E) |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32° 10′N | 64° 30′W | 8/19/10 | 14:30 | n.d. | n.d. | 4 | n.d. | n.d. |
| 2 | 31° 58′N | 64° 17′W | 8/19/10 | 23:00 | 28.9 | 36.7 | 3 | n.d. | n.d. |
| 3 | 31° 66′N | 64° 17′W | 8/20/10 | 8:00 | 28.5 | 36.7 | 4 | 9 | n.d. |
| 4 | 31° 66′N | 64° 17′W | 8/20/10 | 19:30 | 28.7 | 36.7 | 4 | 2 | n.d. |
| 5 | 31°70′N | 64° 16′W | 8/21/10 | 15:00 | 28.7 | 36.7 | 4 | 11 | n.d. |
| 7 | 31° 67′N | 64° 17′W | 8/22/10 | 12:00 | 28.8 | 36.7 | n.d. | 7 | 14 |
The number of replicate samples analyzed is listed for each technique. For inductively coupled plasma mass spectrometry (ICP-MS) and CHN analysis the number of replicate bulk colony assemblages analyzed is shown. For synchrotron x-ray fluorescence (SXRF) the number of trichome sections analyzed is shown. GSECARS and 2ID-E indicate the beamlines used to conduct SXRF analyses at the Advanced Photon Source.
Mean element quotas measured by CHN and ICP-MS for .
| Station | C | N | P | V | Mn | Fe | Ni | Cu | Zn | Mo | Cd | C:N | C:P | V:C | Mn:C | Fe:C | Ni:C | Cu:C | Zn:C | Mo:C | Cd:C |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Blank | |||||||||||||||||||||
| 1 | |||||||||||||||||||||
| 2 | |||||||||||||||||||||
| 3 | |||||||||||||||||||||
| 4 | |||||||||||||||||||||
| 5 | |||||||||||||||||||||
C, N, and P are in units of nmol·colony.
P-normalized mean metal stoichiometries of .
| Station | Technique | Time | V:P | Mn:P | Fe:P | Ni:P | Zn:P | Mo:P | Cd:P |
|---|---|---|---|---|---|---|---|---|---|
| 1 | ICP-MS | 14:30 | |||||||
| 2 | ICP-MS | 23:00 | |||||||
| 3 | ICP-MS | 8:00 | |||||||
| 3 | SXRF | 8:00 | |||||||
| 4 | ICP-MS | 19:30 | |||||||
| 4 | SXRF | 19:30 | |||||||
| 3.9 | 0.5 | 25.9 | |||||||
| 5 | ICP-MS | 15:00 | |||||||
| 5 | SXRF | 15:00 | |||||||
| 7 | SXRF | 12:00 | |||||||
Cd:P stoichiometry is presented as umol mol.
Figure 2P-normalized metal quotas of . The bars are means ± SD for replicate filters (ICP-MS) or for different trichome sections in colonies collected from the same station (SXRF). Only data for non-oxalate-washed trichomes and colonies are included.
Figure 3Light micrographs, false-color element (P, S, V, Fe and Ni) maps, and differential phase contrast images (phase) (Hornberger et al., . The color scale for element maps is shown, with warmer colors indicating higher element concentrations. The color scheme of the differential phase contrast image does not follow the color scale for the element maps. The location of each trichome section is indicated on the light micrograph with a unique outline color. Maps C-1 (green), C-2 (yellow), and C-3 (blue) were recorded at the GSECARS beamline, while maps C-I to C-IV (red) were recorded at 2ID-E.
Figure 4Light micrographs, false-color element (P, S, V, Fe and Ni) maps, and differential phase contrast images (phase) (Hornberger et al., . The color scale for element maps is shown, with warmer colors indicating higher element concentrations. The color scheme of the differential phase contrast image does not follow the color scale for the element maps. The location of each trichome section is indicated on the light micrograph with a unique outline color. MAP D-1 (green) was recorded at the GSECARS beamline, while maps D-I (orange), D-II (dark blue), D-III (light blue), D-IV (yellow), and D-V (red) were recorded at 2ID-E.
Figure 5Comparison of element concentrations in overlapping trichome sections analyzed with GSECARS and 2ID-E beamlines. The panels on the left present V, Fe, and Mn concentrations as nmol cm−2. The four panels on the right present V, Fe, and Mn concentrations normalized to P (mmol mol−1). The bars are means ± SD. n.d., concentrations below detection level.
Comparison of areal element concentrations and P- and S-normalized stoichiometries for V, Mn, and Fe measured at GSECARS and at 2ID-E.
| GSECARS | 2ID-E | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Trichome | V | Mn | Fe | V:P | Mn:P | Fe:P | V:S | Mn:S | Fe:S | Trichome | V | Mn | Fe | V:P | Mn:P | Fe:P | V:S | Mn:S | Fe:S |
| C-1 | 1.02 | 0.01 | 0.24 | 143 | 1.62 | 33.3 | 25.7 | 0.29 | 5.97 | C-I | 2.08 | 0.03 | 1.06 | 116 | 2.85 | 56.3 | 15.5 | 0.23 | 7.86 |
| C-2 | 0.47 | 0.02 | 0.61 | 75.5 | 3.51 | 98.4 | 17.0 | 0.79 | 22.12 | C-II | 1.27 | 0.05 | 1.17 | 74.4 | 3.92 | 67.0 | 13.1 | 0.49 | 12.1 |
| C-3 | 0.72 | 0.01 | 0.23 | 112 | 1.56 | 36.5 | 18.8 | 0.26 | 6.10 | C-III | 1.16 | 0.03 | 1.22 | 59.8 | 2.59 | 60.8 | 12.1 | 0.36 | 12.8 |
| D-1 | 0.80 | n.d. | 0.16 | 190 | n.d. | 39.3 | 44.2 | n.d. | 9.15 | D-I | 4.10 | n.d. | 0.88 | 209 | n.d. | 43.2 | 29.9 | n.d. | 6.41 |
| D-II | 5.20 | n.d. | 1.21 | 205 | n.d. | 45.8 | 36.5 | n.d. | 8.45 | ||||||||||
| D-III | 5.29 | n.d. | 0.97 | 221 | n.d. | 39.1 | 38.8 | n.d. | 7.14 | ||||||||||
| D-IV | 3.49 | n.d. | 0.90 | 171 | n.d. | 42.4 | 26.3 | n.d. | 6.77 | ||||||||||
Areal concentrations are presented in nmol cm.
Figure 6Comparison of SXRF-analyzed trichome sections with or without oxalate treatment to remove externally bound elements. Areal concentrations are presented in nmol cm−2. Each station has its unique symbol: St 3 – triangle, St 4 – circle, St 5 – square, and St 7 – diamond. The statistical significance of the effect of oxalate rinsing on the metal quotas (as determined with a two-way ANOVA; see text), is shown in each panel.
Figure 7Temporal comparison of P-normalized element quotas determined by ICP-MS for natural . Bars are means ± SD.
Figure 8Temporal comparison of S-normalized element stoichiometries determined with SXRF (combined oxalate and non-oxalate data from both beamlines) on individual trichome sections. Bars are means ± SD. The statistical significance of the effect of sampling time on the element stoichiometries (as determined with a non-parametric Kruskal–Wallis test; see text), is shown in each panel.
Figure 9Light micrographs, false-color element (P, S, V, Fe and Ni) maps, and differential phase contrast images (phase) (Hornberger et al., . The color scale for element maps is shown, with warmer colors indicating higher element concentrations. The color scheme of the differential phase contrast image does not follow the color scale for the element maps. The location of each analyzed trichome section is indicated on the light micrograph. MAP A-1 (orange) and map A-2 (green) were recorded at the GSECARS beamline, while maps A-I (red) and A-II (yellow) were recorded at 2ID-E.
Figure 11Light micrographs and false-color element (P, S,V, and Fe) maps of a . The color scale for element maps is shown, with warmer colors indicating higher element concentrations. The location of the analyzed trichome section is indicated on the light micrograph in red (V-1). This map was recorded at GSECARS.
Figure 12One dimensional line plot along the main axis of trichome D-1. Data were extracted from the entire visible section of the trichome mapped here. Associated elemental maps of P, V, and Fe are given below.
Comparison of S-normalized stoichiometries for P, V, Mn, and Fe measured at GSECARS and at 2ID-E.
| Time | P:S | V:S | Mn:S | Fe:S |
|---|---|---|---|---|
| 8:00 | ||||
| 12:00 | ||||
| 15:00 | ||||
| 19:30 | ||||
Data are presented in mmol mol.