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Literature DB >> 22547162

Identification and phylogenetic analysis of orf viruses isolated from outbreaks in goats of Assam, a northeastern state of India.

Durlav Prasad Bora¹, Nagendra Nath Barman, Sailendra Kumar Das, Veerakyathappa Bhanuprakash, Revanaiah Yogisharadhya, Gnanavel Venkatesan, Amit Kumar, Gitika Rajbongshi, Elina Khatoon, Apurba Chakraborty, Kamal Malla Bujarbaruah.

Abstract

Two outbreaks of orf virus (ORFV) (a parapoxvirus) infection in goats, which occurred in Golaghat and Kamrup districts of Assam, a northeastern part of India, were investigated. The disease was diagnosed by standard virological and molecular techniques. The entire protein-coding region of B2L gene of two isolates were cloned and sequenced. Phylogenetic analysis based on B2L amino acid sequences showed that the ORFVs identified in these outbreaks were closely related to each other and both were closer to ORFV-Shahjahanpur 82/04 isolate from north India. The present study revealed that the precise characterization of the genomic region (B2L gene) might provide evidence for the genetic variation and movement of circulating ORFV strains in India.

Entities: Chemical

Mesh：

Year: 2012 PMID： 22547162 DOI： 10.1007/s11262-012-0740-y

Source DB: PubMed Journal: Virus Genes ISSN： 0920-8569 Impact factor: 2.198

12 in total

1. Mixed infection of peste des petits ruminants and orf on a goat farm in Shahjahanpur, India.

Authors: P Saravanan; V Balamurugan; A Sen; J Sarkar; B Sahay; K K Rajak; M Hosamani; M P Yadav; R K Singh
Journal: Vet Rec Date: 2007-03-24 Impact factor: 2.695

Review 2. Orf: an update on current research and future perspectives.

Authors: Madhusudan Hosamani; Alessandra Scagliarini; Veerakyathappa Bhanuprakash; Colin J McInnes; Raj Kumar Singh
Journal: Expert Rev Anti Infect Ther Date: 2009-09 Impact factor: 5.091

3. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors: Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal: Mol Biol Evol Date: 2011-05-04 Impact factor: 16.240

4. TaqMan real-time PCR assay based on DNA polymerase gene for rapid detection of Orf infection.

Authors: D P Bora; G Venkatesan; V Bhanuprakash; V Balamurugan; M Prabhu; M S Siva Sankar; R Yogisharadhya
Journal: J Virol Methods Date: 2011-09-17 Impact factor: 2.014

5. Sequence and phylogenetic analyses of an Indian isolate of orf virus from sheep.

Authors: Gnanavel Venkatesan; Vinayagamurthy Balamurugan; Durlav Prasad Bora; Revanaiah Yogisharadhya; Manimuthu Prabhu; Veerakyathappa Bhanuprakash
Journal: Vet Ital Date: 2011 Jul-Sep Impact factor: 1.101

6. Detection and diagnosis of parapoxvirus by the polymerase chain reaction.

Authors: Y Inoshima; A Morooka; H Sentsui
Journal: J Virol Methods Date: 2000-02 Impact factor: 2.014

7. Comparative sequence analysis of major envelope protein gene (B2L) of Indian orf viruses isolated from sheep and goats.

Authors: Madhusudan Hosamani; V Bhanuprakash; A Scagliarini; R K Singh
Journal: Vet Microbiol Date: 2006-05-07 Impact factor: 3.293

8. Identification and phylogenetic analysis of an Orf virus isolated from an outbreak in sheep in the Jilin province of China.

Authors: Kui Zhao; Deguang Song; Wenqi He; Huijun Lu; Bingbing Zhang; Chao Li; Keyan Chen; Feng Gao
Journal: Vet Microbiol Date: 2009-10-31 Impact factor: 3.293

9. Isolation and characterization of an Indian ORF virus from goats.

Authors: M Hosamani; S Yadav; D J Kallesh; B Mondal; V Bhanuprakash; R K Singh
Journal: Zoonoses Public Health Date: 2007 Impact factor: 2.702

10. Detection and phylogenetic analysis of Orf virus from sheep in Brazil: a case report.

Authors: Jônatas S Abrahão; Rafael K Campos; Giliane S Trindade; Maria I M Guedes; Zélia I P Lobato; Carlos Mazur; Paulo C P Ferreira; Cláudio A Bonjardim; Erna G Kroon
Journal: Virol J Date: 2009-05-04 Impact factor: 4.099

15 in total

1. Isolation and molecular characterization of Orf virus from natural outbreaks in goats of Assam.

Authors: Mousumi Bora; Durlav Prasad Bora; Nagendra Nath Barman; Biswajyoti Borah; Padma Lochan Bora; Archana Talukdar; Shantanu Tamuly
Journal: Virusdisease Date: 2015-06-23

2. Molecular characterization of Indian sheeppox and goatpox viruses based on RPO30 and GPCR genes.

Authors: Ramasamy Santhamani; Revanaiah Yogisharadhya; Gnanavel Venkatesan; Sathish Bhadravati Shivachandra; Awadh Bihari Pandey; Muthannan Andavar Ramakrishnan
Journal: Virus Genes Date: 2014-06-22 Impact factor: 2.332

3. Molecular evidence and phylogenetic analysis of orf virus isolates from outbreaks in Tripura state of North-East India.

Authors: Gnanavel Venkatesan; Ankan De; Sargam Arya; Amit Kumar; D Muthuchelvan; Bikas Ch Debnath; Tapan Kumar Dutta; Divakar Hemadri; A B Pandey
Journal: Virusdisease Date: 2018-03-22

Identification and phylogenetic analysis of orf viruses isolated from outbreaks in goats of Assam, a northeastern state of India.

1. Mixed infection of peste des petits ruminants and orf on a goat farm in Shahjahanpur, India.

Review 2. Orf: an update on current research and future perspectives.

3. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

4. TaqMan real-time PCR assay based on DNA polymerase gene for rapid detection of Orf infection.

5. Sequence and phylogenetic analyses of an Indian isolate of orf virus from sheep.

6. Detection and diagnosis of parapoxvirus by the polymerase chain reaction.

7. Comparative sequence analysis of major envelope protein gene (B2L) of Indian orf viruses isolated from sheep and goats.

8. Identification and phylogenetic analysis of an Orf virus isolated from an outbreak in sheep in the Jilin province of China.

9. Isolation and characterization of an Indian ORF virus from goats.

10. Detection and phylogenetic analysis of Orf virus from sheep in Brazil: a case report.

1. Isolation and molecular characterization of Orf virus from natural outbreaks in goats of Assam.

2. Molecular characterization of Indian sheeppox and goatpox viruses based on RPO30 and GPCR genes.

3. Molecular evidence and phylogenetic analysis of orf virus isolates from outbreaks in Tripura state of North-East India.

4. Isolation and molecular characterization of contagious pustular dermatitis virus from Rajasthan, India.

5. Occurrence and identification of contagious ecthyma in blackbuck.

6. Molecular characterization of orf virus from sheep and goats in Ethiopia, 2008-2013.

7. Seroprevalence of contagious ecthyma in goats of Assam: An analysis by indirect enzyme-linked immunosorbent assay.

8. Isolation and characterization of orf viruses from Korean black goats.

9. Heterogeneity among orf virus isolates from goats in Fujian Province, Southern China.

10. Phylogenetic analysis of eight sudanese camel contagious ecthyma viruses based on B2L gene sequence.