Literature DB >> 22546537

Gene duplication and the evolution of plant MADS-box transcription factors.

Chiara A Airoldi1, Brendan Davies.   

Abstract

Since the first MADS-box transcription factor genes were implicated in the establishment of floral organ identity in a couple of model plants, the size and scope of this gene family has begun to be appreciated in a much wider range of species. Over the course of millions of years the number of MADS-box genes in plants has increased to the point that the Arabidopsis genome contains more than 100. The understanding gained from studying the evolution, regulation and function of multiple MADS-box genes in an increasing set of species, makes this large plant transcription factor gene family an ideal subject to study the processes that lead to an increase in gene number and the selective birth, death and repurposing of its component members. Here we will use examples taken from the MADS-box gene family to review what is known about the factors that influence the loss and retention of genes duplicated in different ways and examine the varied fates of the retained genes and their associated biological outcomes.
Copyright © 2012. Published by Elsevier Ltd.

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Year:  2012        PMID: 22546537     DOI: 10.1016/j.jgg.2012.02.008

Source DB:  PubMed          Journal:  J Genet Genomics        ISSN: 1673-8527            Impact factor:   4.275


  41 in total

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Authors:  Dorothee Staiger; John W S Brown
Journal:  Plant Cell       Date:  2013-10-31       Impact factor: 11.277

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Journal:  Mol Genet Genomics       Date:  2014-11-28       Impact factor: 3.291

3.  Phylogenomic Synteny Network Analysis of MADS-Box Transcription Factor Genes Reveals Lineage-Specific Transpositions, Ancient Tandem Duplications, and Deep Positional Conservation.

Authors:  Tao Zhao; Rens Holmer; Suzanne de Bruijn; Gerco C Angenent; Harrold A van den Burg; M Eric Schranz
Journal:  Plant Cell       Date:  2017-06-05       Impact factor: 11.277

4.  Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana.

Authors:  Melissa D Lehti-Shiu; Sahra Uygun; Gaurav D Moghe; Nicholas Panchy; Liang Fang; David E Hufnagel; Hannah L Jasicki; Michael Feig; Shin-Han Shiu
Journal:  Plant Physiol       Date:  2015-06-23       Impact factor: 8.340

5.  Current trends and future directions in flower development research.

Authors:  Charlie P Scutt; Michiel Vandenbussche
Journal:  Ann Bot       Date:  2014-11       Impact factor: 4.357

6.  VRN1 genes variability in tetraploid wheat species with a spring growth habit.

Authors:  Irina Konopatskaia; Valeriya Vavilova; Elena Ya Kondratenko; Alexandr Blinov; Nikolay P Goncharov
Journal:  BMC Plant Biol       Date:  2016-11-16       Impact factor: 4.215

7.  Genome-wide identification and comparative analysis of the cation proton antiporters family in pear and four other Rosaceae species.

Authors:  Hongsheng Zhou; Kaijie Qi; Xing Liu; Hao Yin; Peng Wang; Jianqing Chen; Juyou Wu; Shaoling Zhang
Journal:  Mol Genet Genomics       Date:  2016-05-19       Impact factor: 3.291

8.  Evolutionary and Functional Analysis of Membrane-Bound NAC Transcription Factor Genes in Soybean.

Authors:  Shuo Li; Nan Wang; Dandan Ji; Zheyong Xue; Yanchong Yu; Yupei Jiang; Jinglin Liu; Zhenhua Liu; Fengning Xiang
Journal:  Plant Physiol       Date:  2016-09-26       Impact factor: 8.340

9.  Genome-wide analysis of the MADS-box gene family in Brassica rapa (Chinese cabbage).

Authors:  Weike Duan; Xiaoming Song; Tongkun Liu; Zhinan Huang; Jun Ren; Xilin Hou; Ying Li
Journal:  Mol Genet Genomics       Date:  2014-09-13       Impact factor: 3.291

Review 10.  Evolution of Gene Duplication in Plants.

Authors:  Nicholas Panchy; Melissa Lehti-Shiu; Shin-Han Shiu
Journal:  Plant Physiol       Date:  2016-06-10       Impact factor: 8.340

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