Literature DB >> 22543348

A simple, versatile method for GFP-based super-resolution microscopy via nanobodies.

Jonas Ries1, Charlotte Kaplan, Evgenia Platonova, Hadi Eghlidi, Helge Ewers.   

Abstract

We developed a method to use any GFP-tagged construct in single-molecule super-resolution microscopy. By targeting GFP with small, high-affinity antibodies coupled to organic dyes, we achieved nanometer spatial resolution and minimal linkage error when analyzing microtubules, living neurons and yeast cells. We show that in combination with libraries encoding GFP-tagged proteins, virtually any known protein can immediately be used in super-resolution microscopy and that simplified labeling schemes allow high-throughput super-resolution imaging.

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Year:  2012        PMID: 22543348     DOI: 10.1038/nmeth.1991

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  20 in total

1.  Global analysis of protein localization in budding yeast.

Authors:  Won-Ki Huh; James V Falvo; Luke C Gerke; Adam S Carroll; Russell W Howson; Jonathan S Weissman; Erin K O'Shea
Journal:  Nature       Date:  2003-10-16       Impact factor: 49.962

2.  Short-range spectroscopic ruler based on a single-molecule optical switch.

Authors:  Mark Bates; Timothy R Blosser; Xiaowei Zhuang
Journal:  Phys Rev Lett       Date:  2005-03-15       Impact factor: 9.161

3.  Targeting and tracing antigens in live cells with fluorescent nanobodies.

Authors:  Ulrich Rothbauer; Kourosh Zolghadr; Sergei Tillib; Danny Nowak; Lothar Schermelleh; Anja Gahl; Natalija Backmann; Katja Conrath; Serge Muyldermans; M Cristina Cardoso; Heinrich Leonhardt
Journal:  Nat Methods       Date:  2006-11       Impact factor: 28.547

4.  High-density mapping of single-molecule trajectories with photoactivated localization microscopy.

Authors:  Suliana Manley; Jennifer M Gillette; George H Patterson; Hari Shroff; Harald F Hess; Eric Betzig; Jennifer Lippincott-Schwartz
Journal:  Nat Methods       Date:  2008-01-13       Impact factor: 28.547

5.  Fluorescence nanoscopy by ground-state depletion and single-molecule return.

Authors:  Jonas Fölling; Mariano Bossi; Hannes Bock; Rebecca Medda; Christian A Wurm; Birka Hein; Stefan Jakobs; Christian Eggeling; Stefan W Hell
Journal:  Nat Methods       Date:  2008-09-15       Impact factor: 28.547

6.  Three-dimensional sub-100 nm resolution fluorescence microscopy of thick samples.

Authors:  Manuel F Juette; Travis J Gould; Mark D Lessard; Michael J Mlodzianoski; Bhupendra S Nagpure; Brian T Bennett; Samuel T Hess; Joerg Bewersdorf
Journal:  Nat Methods       Date:  2008-05-11       Impact factor: 28.547

7.  Dynamics of septin ring and collar formation in Saccharomyces cerevisiae.

Authors:  Hsin Chen; Audrey S Howell; Alex Robeson; Daniel J Lew
Journal:  Biol Chem       Date:  2011-07-07       Impact factor: 3.915

8.  Genetic control of the cell division cycle in yeast. IV. Genes controlling bud emergence and cytokinesis.

Authors:  L H Hartwell
Journal:  Exp Cell Res       Date:  1971-12       Impact factor: 3.905

9.  Cell cycle control of septin ring dynamics in the budding yeast.

Authors:  V J Cid; L Adamiková; M Sánchez; M Molina; C Nombela
Journal:  Microbiology       Date:  2001-06       Impact factor: 2.777

10.  Fast, single-molecule localization that achieves theoretically minimum uncertainty.

Authors:  Carlas S Smith; Nikolai Joseph; Bernd Rieger; Keith A Lidke
Journal:  Nat Methods       Date:  2010-04-04       Impact factor: 28.547

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  189 in total

1.  Super-resolve me: from micro to nano.

Authors:  Michael Eisenstein
Journal:  Nature       Date:  2015-10-15       Impact factor: 49.962

Review 2.  Nanobodies as Probes for Protein Dynamics in Vitro and in Cells.

Authors:  Oleg Y Dmitriev; Svetlana Lutsenko; Serge Muyldermans
Journal:  J Biol Chem       Date:  2015-12-16       Impact factor: 5.157

Review 3.  FRET-FLIM applications in plant systems.

Authors:  Christoph A Bücherl; Arjen Bader; Adrie H Westphal; Sergey P Laptenok; Jan Willem Borst
Journal:  Protoplasma       Date:  2014-01-04       Impact factor: 3.356

Review 4.  Seeing the forest tree by tree: super-resolution light microscopy meets the neurosciences.

Authors:  Marta Maglione; Stephan J Sigrist
Journal:  Nat Neurosci       Date:  2013-06-25       Impact factor: 24.884

5.  Aptamers as potential tools for super-resolution microscopy.

Authors:  Felipe Opazo; Matthew Levy; Michelle Byrom; Christina Schäfer; Claudia Geisler; Teja W Groemer; Andrew D Ellington; Silvio O Rizzoli
Journal:  Nat Methods       Date:  2012-10       Impact factor: 28.547

6.  Molecular profiling of neurons based on connectivity.

Authors:  Mats I Ekstrand; Alexander R Nectow; Zachary A Knight; Kaamashri N Latcha; Lisa E Pomeranz; Jeffrey M Friedman
Journal:  Cell       Date:  2014-05-22       Impact factor: 41.582

7.  Three-dimensional total-internal reflection fluorescence nanoscopy with nanometric axial resolution by photometric localization of single molecules.

Authors:  Alan M Szalai; Bruno Siarry; Jerónimo Lukin; David J Williamson; Nicolás Unsain; Alfredo Cáceres; Mauricio Pilo-Pais; Guillermo Acuna; Damián Refojo; Dylan M Owen; Sabrina Simoncelli; Fernando D Stefani
Journal:  Nat Commun       Date:  2021-01-22       Impact factor: 14.919

Review 8.  Applying superresolution localization-based microscopy to neurons.

Authors:  Haining Zhong
Journal:  Synapse       Date:  2015-02-28       Impact factor: 2.562

Review 9.  Three-Dimensional Localization of Single Molecules for Super-Resolution Imaging and Single-Particle Tracking.

Authors:  Lexy von Diezmann; Yoav Shechtman; W E Moerner
Journal:  Chem Rev       Date:  2017-02-02       Impact factor: 60.622

10.  Covalent Protein Labeling by SpyTag-SpyCatcher in Fixed Cells for Super-Resolution Microscopy.

Authors:  Veronica Pessino; Y Rose Citron; Siyu Feng; Bo Huang
Journal:  Chembiochem       Date:  2017-06-22       Impact factor: 3.164

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