| Literature DB >> 22542812 |
Kavishwar B Wagholikar1, Kathy L MacLaughlin, Michael R Henry, Robert A Greenes, Ronald A Hankey, Hongfang Liu, Rajeev Chaudhry.
Abstract
OBJECTIVE: To develop a computerized clinical decision support system (CDSS) for cervical cancer screening that can interpret free-text Papanicolaou (Pap) reports.Entities:
Mesh:
Year: 2012 PMID: 22542812 PMCID: PMC3422840 DOI: 10.1136/amiajnl-2012-000820
Source DB: PubMed Journal: J Am Med Inform Assoc ISSN: 1067-5027 Impact factor: 4.497
Figure 1Overview of the clinical decision support system (CDSS). There are three modules: guideline engine, data module and free-text processor. The data module seeks patient information from the Mayo electronic medical record (EMR). It holds the information in a form that is amenable to the guideline engine and depends on the free-text processor to interpret free-text Papanicolaou (Pap) reports. The guideline engine and free-text processor are essentially rule-based.
Figure 2Schematic diagram shows some of the concepts in Papanicolaou (Pap) report required for applying the national guidelines for cervical cancer screening. ASC-H, high grade squamous intraepithelial lesion; ASC-US, atypical squamous cells of undetermined significance; (ASKS), ; DNOEC, inadequate transformation zone component; GECA, glandular epithelial cell abnormality; HPV, human papillomavirus; HSIL, intraepithelial lesions categorized as high grade; LSIL, intraepithelial lesions categorized as low grade; NHPV, negative HPV test; PHPV, positive HPV test; SCC, squamous cell carcinoma; UNSAR, unsatisfactory for evaluation; NIL, negative for intraepithelial lesion or malignancy.
Distribution of Pap reports across parameters relevant to the guideline rulebase
| Count | % | Cytology | Endocervical zone component | HPV test |
| 9 | 0 | Abnormal (other than ASC-US) | Inadequate | Negative |
| 13 | 0 | Positive | ||
| 64 | 0 | Not performed | ||
| 166 | 0 | Adequate | Negative | |
| 168 | 0 | Positive | ||
| 937 | 2 | Not performed | ||
| 1357 | 3 | |||
| 12 | 0 | ASC-US | Inadequate | Not performed |
| 29 | 0 | Positive | ||
| 68 | 0 | Negative | ||
| 142 | 0 | Adequate | Not performed | |
| 453 | 1 | Positive | ||
| 966 | 2 | Negative | ||
| 1670 | 4 | |||
| 57 | 0 | Negative | Inadequate | Positive |
| 340 | 1 | Adequate | Positive | |
| 2325 | 6 | Inadequate | Negative | |
| 2953 | 7 | Inadequate | Not performed | |
| 13212 | 31 | Adequate | Negative | |
| 19098 | 45 | Adequate | Not performed | |
| 37985 | 91 | |||
| 383 | 1 | Unsatisfactory for evaluation | – | Negative |
| 510 | 1 | – | Not performed | |
| 5 | 0 | – | Positive | |
| 89 | 2 | |||
| 41910 | 100 |
ASC-US, atypical squamous cells of undetermined significance; HPV, human papillomavirus; Pap, Papanicolaou.
Figure 3Flowchart abstraction for the guideline rulebase. ASC-US, atypical squamous cells of undetermined significance; G/C, gynecology clinic; CR, cervical cytology (Pap) report; HPV, human papillomavirus; Pap, Papanicolaou.
Distribution of data points in the guideline rulebase/flowchart across EMR sections
| EMR sections | Type of information | No of flowchart nodes |
| Registration | Sex, age | 4 |
| Patient-provided information | History of hysterectomy | 1 |
| Patient documents | Pap reports | 6 |
| Problem list | Risk of cervical cancer | 1 |
| Laboratory reports | HPV test result | 3 |
EMR, electronic medical record; HPV, human papillomavirus; Pap, Papanicolaou.
Distribution of cases across the decision table
| History of hysterectomy | Last cytology | Last HPV | Last EZC | Age, years | High risk | Previous HPV | Recommendation | No of cases |
| No | Negative | Negative | Inadequate | Consider repeating Pap at 6/12 months | 5 | |||
| No | Negative | Positive | Report absent | Repeat combined Pap–HPV test at 12 months | 4 | |||
| No | Report absent | ≥21 | Pap now | 3 | ||||
| Yes | No Pap needed | 1 | ||||||
| No | ASC-US | Negative | Repeat Pap at 12 months | 9 | ||||
| No | Negative | Negative | Adequate | ≥30 and ≤62 | No | Repeat Pap at 3 years | 9 | |
| No | Negative | Positive | Not performed | Repeat combined Pap–HPV test at 12 months | 9 | |||
| No | Unsatisfactory for evaluation | Repeat Pap at 3 months | 3 | |||||
| No | Negative | Negative | Adequate | >64 | No Pap needed | 4 | ||
| No | Negative | Negative | Adequate | ≥30 and ≤64 | Yes | Repeat Pap at 1 year | 1 | |
| No | Negative | Negative | Adequate | ≥21 and <30 | Repeat Pap at 2 years | 1 | ||
| No | Negative | Not performed | Adequate | ≥21 and <30 | Repeat Pap at 2 years | 2 | ||
| No | Negative | Positive | Negative | Repeat combined Pap–HPV test at 12 months | 5 | |||
| No | Negative | Positive | Positive | Refer to G/N | 4 | |||
| No | Abnormal (other than ASC-US) | Refer to G/N | 6 | |||||
| No | Report absent | <21 | No Pap needed | 3 | ||||
| No | ASC-US | Positive | Refer to G/N | 5 |
Each row indicates the set of variables that correspond to a decision path in the flowchart.
Some cells in the table are blank, which indicates that those variables were not required to be evaluated for the particular decision path.
ASC-US, atypical squamous cells of undetermined significance; EZC, endocervical zone component; G/N, gynecology; HPV, human papillomavirus; Pap, Papanicolaou.
Reasons for suboptimal recommendations by the physician
| Case | Reason |
| 1 | Missed age |
| 2 | Missed previous report |
| 3 | Missed previous report |
| 4 | Missed history of hysterectomy |
| 5 | Read report from different date |
| 6 | Read report from different date |