Literature DB >> 22542599

A network of PUF proteins and Ras signaling promote mRNA repression and oogenesis in C. elegans.

Arnaud Hubstenberger1, Cristiana Cameron, Rebecca Shtofman, Shiri Gutman, Thomas C Evans.   

Abstract

Cell differentiation requires integration of gene expression controls with dynamic changes in cell morphology, function, and control. Post-transcriptional mRNA regulation and signaling systems are important to this process but their mechanisms and connections are unclear. During C. elegans oogenesis, we find that two groups of PUF RNA binding proteins (RNABPs), PUF-3/11 and PUF-5/6/7, control different specific aspects of oocyte formation. PUF-3/11 limits oocyte growth, while PUF-5/6/7 promotes oocyte organization and formation. These two PUF groups repress mRNA translation through overlapping but distinct sets of 3' untranslated regions (3'UTRs). Several PUF-dependent mRNAs encode other mRNA regulators suggesting both PUF groups control developmental patterning of mRNA regulation circuits. Furthermore, we find that the Ras-MapKinase/ERK pathway functions with PUF-5/6/7 to repress specific mRNAs and control oocyte organization and growth. These results suggest that diversification of PUF proteins and their integration with Ras-MAPK signaling modulates oocyte differentiation. Together with other studies, these findings suggest positive and negative interactions between the Ras-MAPK system and PUF RNA-binding proteins likely occur at multiple levels. Changes in these interactions over time can influence spatiotemporal patterning of tissue development.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22542599      PMCID: PMC3361503          DOI: 10.1016/j.ydbio.2012.03.019

Source DB:  PubMed          Journal:  Dev Biol        ISSN: 0012-1606            Impact factor:   3.582


  70 in total

1.  Control of the proliferation versus meiotic development decision in the C. elegans germline through regulation of GLD-1 protein accumulation.

Authors:  Dave Hansen; Laura Wilson-Berry; Thanh Dang; Tim Schedl
Journal:  Development       Date:  2003-12-03       Impact factor: 6.868

Review 2.  Cell signaling in protein synthesis ribosome biogenesis and translation initiation and elongation.

Authors:  Sarah J Mahoney; Jamie M Dempsey; John Blenis
Journal:  Prog Mol Biol Transl Sci       Date:  2009-10-27       Impact factor: 3.622

3.  Bam and Bgcn antagonize Nanos-dependent germ-line stem cell maintenance.

Authors:  Yun Li; Nicole T Minor; Joseph K Park; Dennis M McKearin; Jean Z Maines
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-22       Impact factor: 11.205

4.  A single C. elegans PUF protein binds RNA in multiple modes.

Authors:  Yvonne Yiling Koh; Laura Opperman; Craig Stumpf; Arpita Mandan; Sunduz Keles; Marvin Wickens
Journal:  RNA       Date:  2009-04-15       Impact factor: 4.942

5.  Structural basis for specific recognition of multiple mRNA targets by a PUF regulatory protein.

Authors:  Yeming Wang; Laura Opperman; Marvin Wickens; Traci M Tanaka Hall
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-09       Impact factor: 11.205

6.  Genome-wide analysis of mRNA targets for Caenorhabditis elegans FBF, a conserved stem cell regulator.

Authors:  Aaron M Kershner; Judith Kimble
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-08       Impact factor: 11.205

7.  Mammalian Pumilio 2 regulates dendrite morphogenesis and synaptic function.

Authors:  John P Vessey; Lucia Schoderboeck; Ewald Gingl; Ettore Luzi; Julia Riefler; Francesca Di Leva; Daniela Karra; Sabine Thomas; Michael A Kiebler; Paolo Macchi
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-28       Impact factor: 11.205

8.  Regulation of the mitosis/meiosis decision in the Caenorhabditis elegans germline.

Authors:  Sarah L Crittenden; Christian R Eckmann; Liaoteng Wang; David S Bernstein; Marvin Wickens; Judith Kimble
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2003-08-29       Impact factor: 6.237

9.  The STAR/Maxi-KH domain protein GLD-1 mediates a developmental switch in the translational control of C. elegans PAL-1.

Authors:  Darcy Mootz; Diana M Ho; Craig P Hunter
Journal:  Development       Date:  2004-06-16       Impact factor: 6.868

10.  Genome-wide RNAi screening in Caenorhabditis elegans.

Authors:  Ravi S Kamath; Julie Ahringer
Journal:  Methods       Date:  2003-08       Impact factor: 3.608

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  12 in total

1.  Translation repressors, an RNA helicase, and developmental cues control RNP phase transitions during early development.

Authors:  Arnaud Hubstenberger; Scott L Noble; Cristiana Cameron; Thomas C Evans
Journal:  Dev Cell       Date:  2013-10-28       Impact factor: 12.270

2.  PRIMA: a gene-centered, RNA-to-protein method for mapping RNA-protein interactions.

Authors:  Alex M Tamburino; Ebru Kaymak; Shaleen Shrestha; Amy D Holdorf; Sean P Ryder; Albertha J M Walhout
Journal:  Translation (Austin)       Date:  2017-02-28

3.  A PUF Hub Drives Self-Renewal in Caenorhabditis elegans Germline Stem Cells.

Authors:  Kimberly A Haupt; Kimberley T Law; Amy L Enright; Charlotte R Kanzler; Heaji Shin; Marvin Wickens; Judith Kimble
Journal:  Genetics       Date:  2019-11-18       Impact factor: 4.562

4.  Ubiquitin ligases and a processive proteasome facilitate protein clearance during the oocyte-to-embryo transition in Caenorhabditis elegans.

Authors:  Caroline A Spike; Tatsuya Tsukamoto; David Greenstein
Journal:  Genetics       Date:  2022-05-05       Impact factor: 4.402

Review 5.  Translational Control of Germ Cell Decisions.

Authors:  Kumari Pushpa; Ganga Anil Kumar; Kuppuswamy Subramaniam
Journal:  Results Probl Cell Differ       Date:  2017

6.  PUF-8, a Pumilio homolog, inhibits the proliferative fate in the Caenorhabditis elegans germline.

Authors:  Hilary Racher; Dave Hansen
Journal:  G3 (Bethesda)       Date:  2012-10-01       Impact factor: 3.154

7.  HES-Mediated Repression of Pten in Caenorhabditis elegans.

Authors:  Han Ting Chou; Raymarie Gomez Vazquez; Kun Wang; Richard Campbell; Gaolin Zheng Milledge; Walter W Walthall; Casonya M Johnson
Journal:  G3 (Bethesda)       Date:  2015-10-04       Impact factor: 3.154

8.  Modifiers of solid RNP granules control normal RNP dynamics and mRNA activity in early development.

Authors:  Arnaud Hubstenberger; Cristiana Cameron; Scott L Noble; Sean Keenan; Thomas C Evans
Journal:  J Cell Biol       Date:  2015-11-02       Impact factor: 10.539

Review 9.  The PUF Protein Family: Overview on PUF RNA Targets, Biological Functions, and Post Transcriptional Regulation.

Authors:  Ming Wang; Laurent Ogé; Maria-Dolores Perez-Garcia; Latifa Hamama; Soulaiman Sakr
Journal:  Int J Mol Sci       Date:  2018-01-30       Impact factor: 5.923

10.  The endogenous mex-3 3´UTR is required for germline repression and contributes to optimal fecundity in C. elegans.

Authors:  Mennatallah M Y Albarqi; Sean P Ryder
Journal:  PLoS Genet       Date:  2021-08-23       Impact factor: 5.917

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