Literature DB >> 22539542

Phylogenetics of tribe Orchideae (Orchidaceae: Orchidoideae) based on combined DNA matrices: inferences regarding timing of diversification and evolution of pollination syndromes.

Luis A Inda1, Manuel Pimentel, Mark W Chase.   

Abstract

BACKGROUND AND AIMS: Tribe Orchideae (Orchidaceae: Orchidoideae) comprises around 62 mostly terrestrial genera, which are well represented in the Northern Temperate Zone and less frequently in tropical areas of both the Old and New Worlds. Phylogenetic relationships within this tribe have been studied previously using only nuclear ribosomal DNA (nuclear ribosomal internal transcribed spacer, nrITS). However, different parts of the phylogenetic tree in these analyses were weakly supported, and integrating information from different plant genomes is clearly necessary in orchids, where reticulate evolution events are putatively common. The aims of this study were to: (1) obtain a well-supported and dated phylogenetic hypothesis for tribe Orchideae, (ii) assess appropriateness of recent nomenclatural changes in this tribe in the last decade, (3) detect possible examples of reticulate evolution and (4) analyse in a temporal context evolutionary trends for subtribe Orchidinae with special emphasis on pollination systems.
METHODS: The analyses included 118 samples, belonging to 103 species and 25 genera, for three DNA regions (nrITS, mitochondrial cox1 intron and plastid rpl16 intron). Bayesian and maximum-parsimony methods were used to construct a well-supported and dated tree. Evolutionary trends in the subtribe were analysed using Bayesian and maximum-likelihood methods of character evolution. KEY
RESULTS: The dated phylogenetic tree strongly supported the recently recircumscribed generic concepts of Bateman and collaborators. Moreover, it was found that Orchidinae have diversified in the Mediterranean basin during the last 15 million years, and one potential example of reticulate evolution in the subtribe was identified. In Orchidinae, pollination systems have shifted on numerous occasions during the last 23 million years.
CONCLUSIONS: The results indicate that ancestral Orchidinae were hymenopteran-pollinated, food-deceptive plants and that these traits have been dominant throughout the evolutionary history of the subtribe in the Mediterranean. Evidence was also obtained that the onset of sexual deception might be linked to an increase in labellum size, and the possibility is discussed that diversification in Orchidinae developed in parallel with diversification of bees and wasps from the Miocene onwards.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22539542      PMCID: PMC3380586          DOI: 10.1093/aob/mcs083

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  53 in total

Review 1.  Mating behavior and chemical communication in the order Hymenoptera.

Authors:  M Ayasse; R J Paxton; J Tengö
Journal:  Annu Rev Entomol       Date:  2001       Impact factor: 19.686

2.  SeqState: primer design and sequence statistics for phylogenetic DNA datasets.

Authors:  Kai Müller
Journal:  Appl Bioinformatics       Date:  2005

3.  Analysis of family-level relationships in bees (Hymenoptera: Apiformes) using 28S and two previously unexplored nuclear genes: CAD and RNA polymerase II.

Authors:  Bryan N Danforth; Jennifer Fang; Sedonia Sipes
Journal:  Mol Phylogenet Evol       Date:  2006-01-18       Impact factor: 4.286

4.  AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics.

Authors:  Johan A A Nylander; James C Wilgenbusch; Dan L Warren; David L Swofford
Journal:  Bioinformatics       Date:  2007-08-30       Impact factor: 6.937

5.  Large population sizes mitigate negative effects of variable weather conditions on fruit set in two spring woodland orchids.

Authors:  Hans Jacquemyn; Rein Brys; Olivier Honnay
Journal:  Biol Lett       Date:  2009-05-20       Impact factor: 3.703

Review 6.  Review. Specificity in pollination and consequences for postmating reproductive isolation in deceptive Mediterranean orchids.

Authors:  Salvatore Cozzolino; Giovanni Scopece
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2008-09-27       Impact factor: 6.237

7.  Spatial genetic structure and frequency of interspecific hybridization in Platanthera aquilonis and P. dilatata (Orchidaceae) occurring in sympatry.

Authors:  Lisa E Wallace
Journal:  Am J Bot       Date:  2006-07       Impact factor: 3.844

8.  MATICCE: mapping transitions in continuous character evolution.

Authors:  Andrew L Hipp; Marcial Escudero
Journal:  Bioinformatics       Date:  2009-10-30       Impact factor: 6.937

9.  A phylogenetic analysis of the Orchidaceae: evidence from rbcL nucleotide.

Authors:  K M Cameron; M W Chase; W M Whitten; P J Kores; D C Jarrell; V A Albert; T Yukawa; H G Hills; D H Goldman
Journal:  Am J Bot       Date:  1999-02       Impact factor: 3.844

10.  Sex pheromone mimicry in the early spider orchid (ophrys sphegodes): patterns of hydrocarbons as the key mechanism for pollination by sexual deception.

Authors:  F P Schiestl; M Ayasse; H F Paulus; C Löfstedt; B S Hansson; F Ibarra; W Francke
Journal:  J Comp Physiol A       Date:  2000-06       Impact factor: 1.836

View more
  21 in total

1.  Ancestral deceit and labile evolution of nectar production in the African orchid genus Disa.

Authors:  Steven D Johnson; Nina Hobbhahn; Benny Bytebier
Journal:  Biol Lett       Date:  2013-07-31       Impact factor: 3.703

2.  Integrative taxonomy of the fly orchid group: insights from chemical ecology.

Authors:  Nina Joffard; Bruno Buatois; Bertrand Schatz
Journal:  Naturwissenschaften       Date:  2016-09-10

3.  Eugenol synthase genes in floral scent variation in Gymnadenia species.

Authors:  Alok K Gupta; Ines Schauvinhold; Eran Pichersky; Florian P Schiestl
Journal:  Funct Integr Genomics       Date:  2014-09-20       Impact factor: 3.410

4.  Molecular phylogeny and evolutionary history of the Eurasiatic orchid genus Himantoglossum s.l. (Orchidaceae).

Authors:  Gábor Sramkó; Molnár V Attila; Julie A Hawkins; Richard M Bateman
Journal:  Ann Bot       Date:  2014-10-07       Impact factor: 4.357

5.  In situ morphometric survey elucidates the evolutionary systematics of the Eurasian Himantoglossum clade (Orchidaceae: Orchidinae).

Authors:  Richard M Bateman; Attila Molnár V; Gábor Sramkó
Journal:  PeerJ       Date:  2017-01-31       Impact factor: 2.984

6.  Deceptive strategy in Dactylorhiza orchids: multidirectional evolution of floral chemistry.

Authors:  Ada Wróblewska; Lech Szczepaniak; Andrzej Bajguz; Iwona Jędrzejczyk; Izabela Tałałaj; Beata Ostrowiecka; Emilia Brzosko; Edyta Jermakowicz; Paweł Mirski
Journal:  Ann Bot       Date:  2019-06-24       Impact factor: 4.357

7.  Phylogenomic Relationships of Diploids and the Origins of Allotetraploids in Dactylorhiza (Orchidaceae).

Authors:  Marie K Brandrud; Juliane Baar; Maria T Lorenzo; Alexander Athanasiadis; Richard M Bateman; Mark W Chase; Mikael Hedrén; Ovidiu Paun
Journal:  Syst Biol       Date:  2020-01-01       Impact factor: 9.160

8.  Restriction-site associated DNA sequencing supports a sister group relationship of Nigritella and Gymnadenia (Orchidaceae).

Authors:  Marie K Brandrud; Ovidiu Paun; Richard Lorenz; Juliane Baar; Mikael Hedrén
Journal:  Mol Phylogenet Evol       Date:  2019-03-23       Impact factor: 5.019

9.  Transcriptome and proteome data reveal candidate genes for pollinator attraction in sexually deceptive orchids.

Authors:  Khalid E M Sedeek; Weihong Qi; Monica A Schauer; Alok K Gupta; Lucy Poveda; Shuqing Xu; Zhong-Jian Liu; Ueli Grossniklaus; Florian P Schiestl; Philipp M Schlüter
Journal:  PLoS One       Date:  2013-05-29       Impact factor: 3.240

10.  Phylogenetics of tribe Collabieae (Orchidaceae, Epidendroideae) based on four chloroplast genes with morphological appraisal.

Authors:  Xiao-Guo Xiang; Wei-Tao Jin; De-Zhu Li; André Schuiteman; Wei-Chang Huang; Jian-Wu Li; Xiao-Hua Jin; Zhen-Yu Li
Journal:  PLoS One       Date:  2014-01-31       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.