Literature DB >> 22538396

One-step amino acid selective isotope labeling of proteins in prototrophic Escherichia coli strains.

Christopher O'Grady1, Benjamin L Rempel, Akosiererem Sokaribo, Sergiy Nokhrin, Oleg Y Dmitriev.   

Abstract

Amino acid selective isotope labeling is a useful approach to simplification of nuclear magnetic resonance (NMR) spectra of large proteins. Cell-free protein synthesis offers essentially unlimited flexibility of labeling patterns but is labor-intensive and expensive. In vivo labeling is simple in principle but generally requires auxotrophic strains, inhibitors of amino acid synthesis, or complex media formulations. We describe a simple procedure for amino acid selective labeling of proteins expressed in prototrophic Escherichia coli strains. Excellent labeling selectivity was achieved for histidine, lysine, methionine, and alanine. Simplicity and robustness of this protocol make it a useful tool for protein NMR.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22538396     DOI: 10.1016/j.ab.2012.04.019

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  10 in total

1.  Resonance assignment for a particularly challenging protein based on systematic unlabeling of amino acids to complement incomplete NMR data sets.

Authors:  Peter Bellstedt; Thomas Seiboth; Sabine Häfner; Henriette Kutscha; Ramadurai Ramachandran; Matthias Görlach
Journal:  J Biomol NMR       Date:  2013-08-14       Impact factor: 2.835

2.  An optimized Npro-based method for the expression and purification of intrinsically disordered proteins for an NMR study.

Authors:  Natsuko Goda; Naoki Matsuo; Takeshi Tenno; Sonoko Ishino; Yoshizumi Ishino; Satoshi Fukuchi; Motonori Ota; Hidekazu Hiroaki
Journal:  Intrinsically Disord Proteins       Date:  2015-02-23

3.  NMR Signal Quenching from Bound Biradical Affinity Reagents in DNP Samples.

Authors:  Rivkah Rogawski; Ivan V Sergeyev; Yinglu Zhang; Timothy H Tran; Yongjun Li; Liang Tong; Ann E McDermott
Journal:  J Phys Chem B       Date:  2017-11-29       Impact factor: 2.991

Review 4.  Advances in NMR structures of integral membrane proteins.

Authors:  Innokentiy Maslennikov; Senyon Choe
Journal:  Curr Opin Struct Biol       Date:  2013-05-27       Impact factor: 6.809

Review 5.  Late metabolic precursors for selective aromatic residue labeling.

Authors:  Julia Schörghuber; Leonhard Geist; Gerald Platzer; Michael Feichtinger; Marilena Bisaccia; Lukas Scheibelberger; Frederik Weber; Robert Konrat; Roman J Lichtenecker
Journal:  J Biomol NMR       Date:  2018-05-28       Impact factor: 2.835

Review 6.  Application of Solution NMR to Structural Studies on α-Helical Integral Membrane Proteins.

Authors:  Dae-Won Sim; Zhenwei Lu; Hyung-Sik Won; Seu-Na Lee; Min-Duk Seo; Bong-Jin Lee; Ji-Hun Kim
Journal:  Molecules       Date:  2017-08-15       Impact factor: 4.411

7.  Probing contacts of inhibitor locked in transition states in the catalytic triad of DENV2 type serine protease and its mutants by 1H, 19F and 15 N NMR spectroscopy.

Authors:  Peter Agback; Esmeralda Woestenenk; Tatiana Agback
Journal:  BMC Mol Cell Biol       Date:  2020-05-25

8.  A set of engineered Escherichia coli expression strains for selective isotope and reactivity labeling of amino acid side chains and flavin cofactors.

Authors:  Jennifer Mehlhorn; Helena Steinocher; Sebastian Beck; John T M Kennis; Peter Hegemann; Tilo Mathes
Journal:  PLoS One       Date:  2013-11-01       Impact factor: 3.240

9.  Intracellular repair of oxidation-damaged α-synuclein fails to target C-terminal modification sites.

Authors:  Andres Binolfi; Antonio Limatola; Silvia Verzini; Jonas Kosten; Francois-Xavier Theillet; Honor May Rose; Beata Bekei; Marchel Stuiver; Marleen van Rossum; Philipp Selenko
Journal:  Nat Commun       Date:  2016-01-25       Impact factor: 14.919

Review 10.  NMR Spectroscopy of supramolecular chemistry on protein surfaces.

Authors:  Peter Bayer; Anja Matena; Christine Beuck
Journal:  Beilstein J Org Chem       Date:  2020-10-09       Impact factor: 2.883

  10 in total

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