Literature DB >> 22535943

Complete genome sequence of the anaerobic perchlorate-reducing bacterium Azospira suillum strain PS.

Kathryne G Byrne-Bailey1, John D Coates.   

Abstract

Azospira suillum strain PS (formally Dechlorosoma suillum strain PS) is a metabolically versatile betaproteobacterium first identified for its ability to grow by dissimilatory reduction of perchlorate and chlorate [denoted (per)chlorate]. Together with Dechloromonas species, these two genera represent the dominant (per)chlorate-reducing bacteria in mesophilic freshwater environments. In addition to (per)chlorate reduction, A. suillum is capable of the anaerobic oxidation of humic substances and is the first anaerobic nitrate-dependent Fe(II) oxidizer outside the Diaphorobacter and Acidovorax genera for which there is a completed genome sequence.

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Year:  2012        PMID: 22535943      PMCID: PMC3347210          DOI: 10.1128/JB.00124-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  14 in total

1.  GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes.

Authors:  Amrita Pati; Natalia N Ivanova; Natalia Mikhailova; Galina Ovchinnikova; Sean D Hooper; Athanasios Lykidis; Nikos C Kyrpides
Journal:  Nat Methods       Date:  2010-05-02       Impact factor: 28.547

2.  Dechloromonas agitata gen. nov., sp. nov. and Dechlorosoma suillum gen. nov., sp. nov., two novel environmentally dominant (per)chlorate-reducing bacteria and their phylogenetic position.

Authors:  L A Achenbach; U Michaelidou; R A Bruce; J Fryman; J D Coates
Journal:  Int J Syst Evol Microbiol       Date:  2001-03       Impact factor: 2.747

3.  Identification of a perchlorate reduction genomic island with novel regulatory and metabolic genes.

Authors:  Ryan A Melnyk; Anna Engelbrektson; Iain C Clark; Hans K Carlson; Kathy Byrne-Bailey; John D Coates
Journal:  Appl Environ Microbiol       Date:  2011-08-19       Impact factor: 4.792

Review 4.  Microorganisms pumping iron: anaerobic microbial iron oxidation and reduction.

Authors:  Karrie A Weber; Laurie A Achenbach; John D Coates
Journal:  Nat Rev Microbiol       Date:  2006-10       Impact factor: 60.633

5.  An Azospira oryzae (syn Dechlorosoma suillum) strain that reduces selenate and selenite to elemental red selenium.

Authors:  William J Hunter
Journal:  Curr Microbiol       Date:  2007-05-04       Impact factor: 2.188

6.  Thermodynamic targeting of microbial perchlorate reduction by selective electron donors.

Authors:  James Ian Van Trump; John D Coates
Journal:  ISME J       Date:  2008-12-18       Impact factor: 10.302

7.  Sequencing and transcriptional analysis of the chlorite dismutase gene of Dechloromonas agitata and its use as a metabolic probe.

Authors:  Kelly S Bender; Susan M O'Connor; Romy Chakraborty; John D Coates; Laurie A Achenbach
Journal:  Appl Environ Microbiol       Date:  2002-10       Impact factor: 4.792

8.  Metabolic primers for detection of (Per)chlorate-reducing bacteria in the environment and phylogenetic analysis of cld gene sequences.

Authors:  Kelly S Bender; Melissa R Rice; William H Fugate; John D Coates; Laurie A Achenbach
Journal:  Appl Environ Microbiol       Date:  2004-09       Impact factor: 4.792

9.  Dechlorosoma suillum Achenbach et al. 2001 is a later subjective synonym of Azospira oryzae Reinhold-Hurek and Hurek 2000.

Authors:  Zhiyuan Tan; Barbara Reinhold-Hurek
Journal:  Int J Syst Evol Microbiol       Date:  2003-07       Impact factor: 2.747

10.  The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions.

Authors:  Victor M Markowitz; Ernest Szeto; Krishna Palaniappan; Yuri Grechkin; Ken Chu; I-Min A Chen; Inna Dubchak; Iain Anderson; Athanasios Lykidis; Konstantinos Mavromatis; Natalia N Ivanova; Nikos C Kyrpides
Journal:  Nucleic Acids Res       Date:  2007-10-12       Impact factor: 16.971

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  12 in total

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Authors:  Jennifer L DuBois; Sunil Ojha
Journal:  Met Ions Life Sci       Date:  2015

2.  Characteristics of denitrification and microbial community in respect to various H2 pressures and distances to the gas supply end in H2-based MBfR.

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Journal:  Front Microbiol       Date:  2022-09-23       Impact factor: 6.064

3.  Genome Sequence of the Type Strain Azospira restricta SUA2 (DSM 18626).

Authors:  Madison C Mikes; William M Moe
Journal:  Microbiol Resour Announc       Date:  2021-05-06

4.  Transposon and deletion mutagenesis of genes involved in perchlorate reduction in Azospira suillum PS.

Authors:  Ryan A Melnyk; Iain C Clark; Annette Liao; John D Coates
Journal:  MBio       Date:  2013-12-31       Impact factor: 7.867

5.  Graphene oxide-dependent growth and self-aggregation into a hydrogel complex of exoelectrogenic bacteria.

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Journal:  Sci Rep       Date:  2016-02-22       Impact factor: 4.379

6.  Genome Sequence of the Thermotolerant Foodborne Pathogen Salmonella enterica Serovar Senftenberg ATCC 43845 and Phylogenetic Analysis of Loci Encoding Increased Protein Quality Control Mechanisms.

Authors:  Scott V Nguyen; Gregory P Harhay; James L Bono; Timothy P L Smith; Dayna M Harhay
Journal:  mSystems       Date:  2017-02-28       Impact factor: 6.496

7.  Genetic determinants of heat resistance in Escherichia coli.

Authors:  Ryan G Mercer; Jinshui Zheng; Rigoberto Garcia-Hernandez; Lifang Ruan; Michael G Gänzle; Lynn M McMullen
Journal:  Front Microbiol       Date:  2015-09-09       Impact factor: 5.640

8.  Metagenomic insights into communities, functions of endophytes, and their associates with infection by root-knot nematode, Meloidogyne incognita, in tomato roots.

Authors:  Bao-Yu Tian; Yi Cao; Ke-Qin Zhang
Journal:  Sci Rep       Date:  2015-11-25       Impact factor: 4.379

9.  Nitrate-Dependent Iron Oxidation: A Potential Mars Metabolism.

Authors:  Alex Price; Victoria K Pearson; Susanne P Schwenzer; Jennyfer Miot; Karen Olsson-Francis
Journal:  Front Microbiol       Date:  2018-03-20       Impact factor: 5.640

10.  Draft Genome Sequence of Azospira sp. Strain I13, a Nitrous Oxide-Reducing Bacterium Harboring Clade II Type nosZ.

Authors:  Toshikazu Suenaga; Tomo Aoyagi; Masaaki Hosomi; Tomoyuki Hori; Akihiko Terada
Journal:  Genome Announc       Date:  2018-05-17
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