Literature DB >> 22535942

Draft genome sequence of Pseudomonas fuscovaginae, a broad-host-range pathogen of plants.

Hitendra Kumar Patel1, Daniel Passos da Silva, Giulia Devescovi, Henri Maraite, Konrad Paszkiewicz, David J Studholme, Vittorio Venturi.   

Abstract

Pseudomonas fuscovaginae was first reported as a pathogen of rice causing sheath rot in plants grown at high altitudes. P. fuscovaginae is now considered a broad-host-range plant pathogen causing disease in several economically important plants. We report what is, to our knowledge, the first draft genome sequence of a P. fuscovaginae strain.

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Year:  2012        PMID： 22535942      PMCID： PMC3347198          DOI： 10.1128/JB.00341-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  6 in total

1.  Phylogenetic affiliation of the pseudomonads based on 16S rRNA sequence.

Authors:  Y Anzai; H Kim; J Y Park; H Wakabayashi; H Oyaizu
Journal:  Int J Syst Evol Microbiol       Date:  2000-07       Impact factor: 2.747

2.  Velvet: algorithms for de novo short read assembly using de Bruijn graphs.

Authors:  Daniel R Zerbino; Ewan Birney
Journal:  Genome Res       Date:  2008-03-18       Impact factor: 9.043

3.  The plant pathogen Pseudomonas fuscovaginae contains two conserved quorum sensing systems involved in virulence and negatively regulated by RsaL and the novel regulator RsaM.

Authors:  Maura Mattiuzzo; Iris Bertani; Sara Ferluga; Laura Cabrio; Joseph Bigirimana; Corrado Guarnaccia; Sandor Pongor; Henri Maraite; Vittorio Venturi
Journal:  Environ Microbiol       Date:  2011-01       Impact factor: 5.491

4.  A draft genome sequence and functional screen reveals the repertoire of type III secreted proteins of Pseudomonas syringae pathovar tabaci 11528.

Authors:  David J Studholme; Selena Gimenez Ibanez; Daniel MacLean; Jeffery L Dangl; Jeff H Chang; John P Rathjen
Journal:  BMC Genomics       Date:  2009-08-24       Impact factor: 3.969

5.  Structure of fuscopeptins, phytotoxic metabolites of Pseudomonas fuscovaginae.

Authors:  A Ballio; F Bossa; L Camoni; D Di Giorgio; M C Flamand; H Maraite; G Nitti; P Pucci; A Scaloni
Journal:  FEBS Lett       Date:  1996-03-04       Impact factor: 4.124

6.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
  6 in total
  7 in total

1.  Genome sequence of the rice pathogen Pseudomonas fuscovaginae CB98818.

Authors:  Guanlin Xie; Zhouqi Cui; Zhongyun Tao; Hui Qiu; He Liu; Muhammad Ibrahim; Bo Zhu; Gulei Jin; Guochang Sun; Abdulwareth Almoneafy; Bin Li
Journal:  J Bacteriol       Date:  2012-10       Impact factor: 3.490

2.  Rice-Infecting Pseudomonas Genomes Are Highly Accessorized and Harbor Multiple Putative Virulence Mechanisms to Cause Sheath Brown Rot.

Authors:  Ian Lorenzo Quibod; Genelou Grande; Eula Gems Oreiro; Frances Nikki Borja; Gerbert Sylvestre Dossa; Ramil Mauleon; Casiana Vera Cruz; Ricardo Oliva
Journal:  PLoS One       Date:  2015-09-30       Impact factor: 3.240

3.  Identification of virulence associated loci in the emerging broad host range plant pathogen Pseudomonas fuscovaginae.

Authors:  Hitendra Kumar Patel; Maura Matiuzzo; Iris Bertani; Vincent de Paul Bigirimana; Gavin J Ash; Monica Höfte; Vittorio Venturi
Journal:  BMC Microbiol       Date:  2014-11-14       Impact factor: 3.605

4.  Genome sequence reveals that Pseudomonas fluorescens F113 possesses a large and diverse array of systems for rhizosphere function and host interaction.

Authors:  Miguel Redondo-Nieto; Matthieu Barret; John Morrissey; Kieran Germaine; Francisco Martínez-Granero; Emma Barahona; Ana Navazo; María Sánchez-Contreras; Jennifer A Moynihan; Candela Muriel; David Dowling; Fergal O'Gara; Marta Martín; Rafael Rivilla
Journal:  BMC Genomics       Date:  2013-01-25       Impact factor: 3.969

5.  The rulB gene of plasmid pWW0 is a hotspot for the site-specific insertion of integron-like elements found in the chromosomes of environmental Pseudomonas fluorescens group bacteria.

Authors:  Glenn Rhodes; Hester Bosma; David Studholme; Dawn L Arnold; Robert W Jackson; Roger W Pickup
Journal:  Environ Microbiol       Date:  2014-01-07       Impact factor: 5.491

Review 6.  Commonalities and differences of T3SSs in rhizobia and plant pathogenic bacteria.

Authors:  Anastasia P Tampakaki
Journal:  Front Plant Sci       Date:  2014-03-27       Impact factor: 5.753

Review 7.  Pseudomonas Lipopeptide-Mediated Biocontrol: Chemotaxonomy and Biological Activity.

Authors:  Feyisara Eyiwumi Oni; Qassim Esmaeel; Joseph Tobias Onyeka; Rasheed Adeleke; Cedric Jacquard; Christophe Clement; Harald Gross; Essaid Ait Barka; Monica Höfte
Journal:  Molecules       Date:  2022-01-07       Impact factor: 4.411
  7 in total

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